Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 1.1e-201 706.4 352 100.0
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 1.3e-183 646.4 352 92.9
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 6.5e-183 644.0 352 92.3
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 2.1e-181 639.0 352 91.8
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 3.6e-181 638.3 353 92.6
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 2.6e-179 632.1 350 92.3
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 9.7e-179 630.2 350 92.0
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 6.3e-178 627.5 353 91.5
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 6.5e-175 617.5 347 89.9
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 1.4e-172 609.8 350 88.3
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 2.1e-165 585.9 349 87.7
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 1.2e-163 580.1 355 85.4
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 1.2e-163 580.1 355 85.4
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 1.2e-163 580.1 355 85.4
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 2.0e-163 579.3 352 85.8
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 2.0e-163 579.3 352 85.8
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 2.0e-163 579.3 355 85.1
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 9.1e-161 570.5 356 84.3
SGA_v2.0_scaffold420G51390 Striga asiatica HOM05D003517 ORTHO05D009798 8.8e-156 553.9 335 86.3
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 8.8e-156 553.9 352 82.1
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 2.3e-151 539.3 330 83.6
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 2.3e-151 539.3 330 83.6
Nn1g10026 Nelumbo nucifera HOM05D003517 ORTHO05D009798 4.0e-148 528.5 280 93.2
Nn1g10028 Nelumbo nucifera HOM05D003517 ORTHO05D009798 4.0e-148 528.5 280 93.2
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.4e-147 525.0 313 85.6
DCAR_032455 Daucus carota HOM05D003517 ORTHO05D009798 2.8e-141 505.8 283 90.5
CsaV3_UNG208660 Cucumis sativus L. HOM05D003517 ORTHO05D009798 4.3e-134 481.9 280 85.7
Ca_14831_v3 Cicer arietinum L. HOM05D003517 ORTHO05D009798 7.5e-131 471.1 260 91.2
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 1.6e-128 463.4 257 90.3
SabraMtG0002700 Salix brachista HOM05D000890 ORTHO05D000697 1.2e-125 453.8 299 79.9
Zm00001eb436030 Zea mays HOM05D003517 ORTHO05D009798 8.6e-119 431.0 292 76.4
CAN.G85.23 Capsicum annuum HOM05D003517 ORTHO05D009798 4.3e-118 428.7 240 91.7
Lsat_1_v5_gn_7_67721 Lactuca sativa HOM05D003517 ORTHO05D009798 3.3e-110 402.5 258 80.2
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 3.3e-110 402.5 253 82.2
Sp3g25550 Schrenkiella parvula HOM05D003517 ORTHO05D009798 2.4e-108 396.4 343 65.9
Hma1.2p1_0020F.1_g014220 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 7.6e-107 391.3 211 93.8
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 1.4e-105 387.1 211 91.0
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 3.2e-105 386.0 230 87.0
Eucgr.C02512 Eucalyptus grandis HOM05D003517 ORTHO05D009798 1.0e-103 380.9 229 85.2
TPR.G20538 Trifolium pratense HOM05D003517 ORTHO05D009798 9.9e-99 364.4 200 93.5
Gorai.001G161800 Gossypium raimondii HOM05D003517 ORTHO05D009798 2.9e-98 362.8 352 61.1
CAN.G1109.3 Capsicum annuum HOM05D003517 ORTHO05D009798 1.1e-97 360.9 207 89.4
Eucgr.H02717 Eucalyptus grandis HOM05D003517 ORTHO05D009798 7.4e-94 348.2 227 80.2
BolSC28t60424H Brassica oleracea HOM05D003517 ORTHO05D009798 4.2e-89 332.4 206 83.5
Lalb_Chr22g0353801 Lupinus albus HOM05D003517 ORTHO05D009798 1.2e-88 330.9 195 87.7
Zm00001eb438100 Zea mays HOM05D003517 ORTHO05D009798 5.7e-86 322.0 203 81.8
Zm00001eb438980 Zea mays HOM05D003517 ORTHO05D009798 5.7e-86 322.0 203 81.8
Zm00001eb439060 Zea mays HOM05D003517 ORTHO05D009798 5.7e-86 322.0 203 81.8
EL10Ac7g18051 Beta vulgaris HOM05D003517 ORTHO05D009798 6.1e-72 275.4 218 67.9
TPR.G36113 Trifolium pratense HOM05D003517 ORTHO05D009798 6.1e-72 275.4 146 92.5
PGSC0003DMG400033608 Solanum tuberosum HOM05D003517 ORTHO05D009798 9.7e-70 268.1 151 90.1
HanXRQChr10g0310901 Helianthus annuus HOM05D003517 ORTHO05D009798 1.7e-69 267.3 166 81.9
unitig_87.g28026 Utricularia gibba HOM05D003517 ORTHO05D009798 6.3e-69 265.4 198 71.7
PSO063G7170 Papaver somniferum HOM05D003517 ORTHO05D009798 1.0e-63 248.1 255 55.3
PSO585G0042 Papaver somniferum HOM05D003517 ORTHO05D009798 1.8e-63 247.3 255 55.3
Nitab4.5_0000172g1110 Nicotiana tabacum HOM05D003517 ORTHO05D009798 5.7e-62 242.3 165 77.6
SEGI_36410 Sequoiadendron giganteum HOM05D003517 ORTHO05D009798 1.3e-61 241.1 265 55.1
Nitab4.5_0003945g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.1e-60 238.0 139 84.2
SHI35305 Sapria himalayana HOM05D003517 ORTHO05D009798 1.1e-60 238.0 174 73.0
Nitab4.5_0000172g2130 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.6e-59 234.2 135 84.4
Solyc11g030940.3 Solanum lycopersicum HOM05D003517 ORTHO05D009798 2.1e-56 223.8 152 77.0
SGA_v2.0_scaffold648G53338 Striga asiatica HOM05D003517 ORTHO05D009798 1.5e-54 217.6 141 78.0
Nitab4.5_0003945g0070 Nicotiana tabacum HOM05D003517 ORTHO05D009798 7.5e-54 215.3 137 82.5
Oeu013683.1 Olea europaea HOM05D003517 ORTHO05D009798 2.2e-53 213.8 173 65.9
Zm00001eb438110 Zea mays HOM05D003517 ORTHO05D009798 1.1e-52 211.5 152 71.7
Zm00001eb438970 Zea mays HOM05D003517 ORTHO05D009798 1.1e-52 211.5 152 71.7
Zm00001eb439050 Zea mays HOM05D003517 ORTHO05D009798 1.1e-52 211.5 152 71.7
Zm00001eb440630 Zea mays HOM05D003517 ORTHO05D009798 1.1e-52 211.5 152 71.7
BraSC48t46337Z Brassica rapa HOM05D003517 ORTHO05D009798 3.6e-48 196.4 159 71.7
Nitab4.5_0001152g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.4e-46 189.9 137 73.0
Nitab4.5_0000172g2160 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.8e-44 184.1 130 73.8
Nn1g09918 Nelumbo nucifera HOM05D003517 ORTHO05D009798 2.7e-40 170.2 91 91.2
Gohir.A13G071500 Gossypium hirsutum HOM05D003517 ORTHO05D009798 6.1e-40 169.1 106 81.1
Nitab4.5_0000172g1090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.4e-39 167.9 137 64.2
TPR.G31549 Trifolium pratense HOM05D003517 ORTHO05D009798 1.4e-36 157.9 94 84.0
HanXRQChr10g0302361 Helianthus annuus HOM05D003517 ORTHO05D009798 1.3e-34 151.4 113 66.4
Solyc10g045740.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 1.1e-33 148.3 98 71.4
Nitab4.5_0001152g1080 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.0e-31 141.7 91 80.2
Nitab4.5_0001152g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.3e-29 134.8 108 66.7
Nitab4.5_0001152g0480 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.9e-29 133.7 183 47.5
CARHR287140 Cardamine hirsuta HOM05D003517 ORTHO05D009798 3.0e-26 123.6 83 78.3
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 9.5e-25 118.6 124 58.1
BraSC159t45733Z Brassica rapa HOM05D003517 ORTHO05D009798 1.0e-23 115.2 86 73.3
Solyc11g030935.1 Solanum lycopersicum HOM05D003517 ORTHO05D009798 1.5e-22 111.3 98 63.3
Nitab4.5_0001127g0280 Nicotiana tabacum HOM05D003517 ORTHO05D009794 2.9e-21 107.1 61 85.2
Nitab4.5_0008059g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.9e-21 107.1 63 87.3
Lalb_Chr22g0353791 Lupinus albus HOM05D003517 ORTHO05D009798 1.4e-20 104.8 58 89.7
Dinv18903 Davidia involucrata HOM05D003517 ORTHO05D009798 1.0e-18 98.6 50 98.0
PSO339G1469 Papaver somniferum HOM05D003517 ORTHO05D009798 6.2e-16 89.4 96 51.0
PSO513G0171 Papaver somniferum HOM05D003517 ORTHO05D009798 6.2e-16 89.4 123 42.3
Nitab4.5_0000351g0300 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.0e-14 84.3 62 67.7
Nitab4.5_0001152g0970 Nicotiana tabacum HOM05D003517 ORTHO05D025894 5.8e-14 82.8 66 63.6
Nitab4.5_0010321g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.7e-13 81.3 50 88.0
Medtr0030s0090 Medicago truncatula HOM05D003517 ORTHO05D009798 8.6e-10 68.9 35 88.6
Nitab4.5_0006196g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 5.6e-09 66.2 42 78.6
Lj2g0009144 Lotus japonicus HOM05D000751 ORTHO05D000889 4.0e-07 60.1 40 77.5
CSS0018598 Camellia sinensis var. sinensis HOM05D002859 ORTHO05D003120 5.8e-06 56.2 48 62.5
Solyc11g030930.3 Solanum lycopersicum HOM05D003517 ORTHO05D009794 5.8e-06 56.2 31 80.6


User provided reference genes

Program Settings