Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P1227T101 Lonicera japonica HOM05D008280 ORTHO05D010492 1.7e-114 416.0 207 100.0
CAN.G1126.5 Capsicum annuum HOM05D008280 ORTHO05D010492 3.3e-110 401.7 207 97.6
CAN.G1159.15 Capsicum annuum HOM05D008280 ORTHO05D010492 3.3e-110 401.7 207 97.6
CAN.G266.10 Capsicum annuum HOM05D008280 ORTHO05D010492 3.3e-110 401.7 207 97.6
Solyc00g020040.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 3.3e-110 401.7 207 97.6
HanXRQMTg0579251 Helianthus annuus HOM05D008280 ORTHO05D010492 2.1e-109 399.1 207 96.6
Nn1g10160 Nelumbo nucifera HOM05D008280 ORTHO05D010492 6.9e-108 394.0 207 95.2
Lsat_1_v5_gn_7_99841 Lactuca sativa HOM05D008280 ORTHO05D010492 4.5e-107 391.3 207 95.2
SalBow1G8376 Salvia bowleyana HOM05D008280 ORTHO05D010492 7.6e-107 390.6 207 95.2
DCAR_032445 Daucus carota HOM05D008280 ORTHO05D010492 2.2e-106 389.0 207 94.7
RcHm_v2.0_MTg0498291 Rosa chinensis HOM05D008280 ORTHO05D010492 1.6e-104 382.9 207 94.2
BNapus_Darmor_BZH_scaffold_234p00070 Brassica napus HOM05D008280 ORTHO05D010492 6.0e-104 380.9 207 93.7
BolSC28t60354H Brassica oleracea HOM05D008280 ORTHO05D010492 6.0e-104 380.9 207 93.7
BraSC159t45719Z Brassica rapa HOM05D008280 ORTHO05D010492 6.0e-104 380.9 207 93.7
BraSC77t46666Z Brassica rapa HOM05D008280 ORTHO05D010492 6.0e-104 380.9 207 93.7
CARHR282640 Cardamine hirsuta HOM05D008280 ORTHO05D010492 6.0e-104 380.9 207 93.7
Sp3g25740 Schrenkiella parvula HOM05D008280 ORTHO05D010492 6.0e-104 380.9 207 93.7
Sed0015016 Sechium edule HOM05D008280 ORTHO05D010492 2.3e-103 379.0 207 92.3
ATMG00110 Arabidopsis thaliana HOM05D008280 ORTHO05D010492 4.3e-102 374.8 207 92.8
Lj5g0023723 Lotus japonicus HOM05D008280 ORTHO05D010492 6.2e-101 370.9 207 90.8
LjContig00315g0024501 Lotus japonicus HOM05D008280 ORTHO05D010492 6.2e-101 370.9 207 90.8
CANSAT16G0019 Cannabis sativa HOM05D008280 ORTHO05D010492 1.1e-100 370.2 207 92.8
Medtr0141s0020 Medicago truncatula HOM05D008280 ORTHO05D010492 4.0e-100 368.2 207 89.9
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 6.9e-100 367.5 207 89.9
BraSC48t46257Z Brassica rapa HOM05D008280 ORTHO05D010492 4.5e-99 364.8 195 93.8
Lalb_Chr00c29g0408141 Lupinus albus HOM05D008280 ORTHO05D010492 1.7e-98 362.8 207 88.4
Potri.007G061721 Populus trichocarpa HOM05D008280 ORTHO05D010492 1.9e-97 359.4 207 90.8
CAN.G72.16 Capsicum annuum HOM05D008280 ORTHO05D010492 2.5e-97 359.0 207 88.9
arahy.Tifrunner.gnm1.ann1.U3KMBF Arachis hypogaea HOM05D008280 ORTHO05D010492 1.3e-95 353.2 195 90.8
Eucgr.E02151 Eucalyptus grandis HOM05D008280 ORTHO05D010492 2.1e-88 329.3 177 93.2
CAN.G362.37 Capsicum annuum HOM05D008280 ORTHO05D010492 1.9e-86 322.8 207 83.1
Nitab4.5_0001796g0300 Nicotiana tabacum HOM05D008280 ORTHO05D010492 2.6e-83 312.4 207 80.7
Nitab4.5_0004471g0100 Nicotiana tabacum HOM05D008280 ORTHO05D010492 3.0e-79 298.9 177 88.7
Sed0028122 Sechium edule HOM05D008280 ORTHO05D010492 3.9e-79 298.5 207 75.8
Nitab4.5_0009703g0040 Nicotiana tabacum HOM05D008280 ORTHO05D010492 2.8e-77 292.4 161 90.7
arahy.Tifrunner.gnm1.ann1.TAQ3SD Arachis hypogaea HOM05D008280 ORTHO05D010492 1.3e-74 283.5 160 89.4
arahy.Tifrunner.gnm1.ann1.9X0QWA Arachis hypogaea HOM05D008280 ORTHO05D010492 1.7e-74 283.1 160 89.4
MBI05_g23314_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 6.7e-71 271.2 146 93.8
SHI07395 Sapria himalayana HOM05D008280 ORTHO05D010492 1.5e-65 253.4 153 83.7
Solyc11g028160.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 1.7e-61 240.0 146 85.6
TAR371G0473 Trochodendron aralioides HOM05D008280 ORTHO05D010492 1.3e-58 230.3 158 79.1
Medtr0094s0120 Medicago truncatula HOM05D008280 ORTHO05D010492 3.4e-54 215.7 132 81.8
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 2.8e-53 212.6 114 94.7
Nn7g37645 Nelumbo nucifera HOM05D008280 ORTHO05D010492 5.9e-51 204.9 100 96.0
unitig_87.g27971 Utricularia gibba HOM05D008280 ORTHO05D010492 2.0e-43 179.9 99 92.9
Lsat_1_v5_gn_7_96601 Lactuca sativa HOM05D008280 ORTHO05D010492 5.0e-42 175.3 99 90.9
HanXRQChr05g0151451 Helianthus annuus HOM05D008280 ORTHO05D010492 7.3e-41 171.4 96 87.5
MBI09_g03548_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 8.0e-40 167.9 123 71.5
CAN.G676.27 Capsicum annuum HOM05D008280 ORTHO05D010492 5.2e-39 165.2 105 81.9
Nitab4.5_0000978g0030 Nicotiana tabacum HOM05D008280 ORTHO05D010492 1.7e-37 160.2 91 90.1
HanXRQChr03g0087181 Helianthus annuus HOM05D008280 ORTHO05D010492 5.4e-36 155.2 99 83.8
Psat1g132520 Pisum sativum HOM05D008280 ORTHO05D010492 2.8e-32 142.9 87 87.4
Ca_30339_v3 Cicer arietinum L. HOM05D008280 ORTHO05D010492 3.4e-30 136.0 146 54.8
Lj2C1224T22 Lonicera japonica HOM05D008280 ORTHO05D010492 1.9e-25 120.2 59 100.0
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 6.8e-23 111.7 66 86.4
Gohir.A13G092605 Gossypium hirsutum HOM05D008280 ORTHO05D010492 3.7e-21 105.9 67 86.6
Solyc12g035890.3 Solanum lycopersicum HOM05D000964 ORTHO05D004047 1.5e-17 94.0 58 75.9
QL08p039717 Quercus lobata HOM05D008280 ORTHO05D010492 9.9e-14 81.3 65 69.2
SHI01507 Sapria himalayana HOM05D008280 ORTHO05D010492 4.7e-08 62.4 108 41.7
Sc04g0005550 Simmondsia chinensis HOM05D008280 ORTHO05D051001 2.6e-06 56.6 40 70.0


User provided reference genes

Program Settings