Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P1154T29 Lonicera japonica HOM05D005591 ORTHO05D007131 1.7e-174 615.9 318 100.0
Duzib212G0264 Durio zibethinus HOM05D005591 ORTHO05D007131 4.1e-144 515.0 317 83.9
Dinv27163 Davidia involucrata HOM05D005591 ORTHO05D007131 1.2e-143 513.5 318 82.7
Gorai.011G147400 Gossypium raimondii HOM05D005591 ORTHO05D007131 1.3e-142 510.0 318 82.1
Thecc.04G188000 Theobroma cacao HOM05D005591 ORTHO05D007131 1.3e-142 510.0 318 82.1
CiPaw.01G109900 Carya illinoinensis HOM05D005591 ORTHO05D007131 8.6e-142 507.3 318 82.1
VMungo0720G0134 Vigna mungo HOM05D005591 ORTHO05D007131 4.3e-141 505.0 313 82.1
QL05p063015 Quercus lobata HOM05D005591 ORTHO05D007131 5.6e-141 504.6 310 83.9
Phvul.008G142801 Phaseolus vulgaris HOM05D005591 ORTHO05D007131 7.3e-141 504.2 315 81.9
Ciclev10020911m.g Citrus clementina HOM05D005591 ORTHO05D007131 9.5e-141 503.8 307 84.0
Actinidia35920 Actinidia chinensis HOM05D005591 ORTHO05D007131 6.1e-140 501.1 318 81.1
CSS0046220 Camellia sinensis var. sinensis HOM05D005591 ORTHO05D007131 6.1e-140 501.1 318 80.5
Hma1.2p1_0349F.1_g132330 Hydrangea macrophylla HOM05D005591 ORTHO05D007131 4.0e-139 498.4 313 80.5
Sabra02G0178800 Salix brachista HOM05D005591 ORTHO05D007131 8.9e-139 497.3 311 82.3
Gohir.A09G209100 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.2e-138 496.9 318 80.5
Gorai.006G226400 Gossypium raimondii HOM05D005591 ORTHO05D007131 1.2e-138 496.9 318 80.2
Potri.002G234400 Populus trichocarpa HOM05D005591 ORTHO05D007131 3.4e-138 495.4 311 82.3
Medtr3g005100 Medicago truncatula HOM05D005591 ORTHO05D007131 1.3e-137 493.4 311 81.4
Nitab4.5_0000368g0340 Nicotiana tabacum HOM05D005591 ORTHO05D007131 1.7e-137 493.0 324 79.9
Gohir.A10G133200 Gossypium hirsutum HOM05D005591 ORTHO05D007131 2.2e-137 492.7 290 87.2
Lalb_Chr12g0209371 Lupinus albus HOM05D005591 ORTHO05D007131 2.9e-137 492.3 312 81.7
Gohir.D09G202500 Gossypium hirsutum HOM05D005591 ORTHO05D007131 3.7e-137 491.9 318 79.9
arahy.Tifrunner.gnm1.ann1.ZABD6C Arachis hypogaea HOM05D005591 ORTHO05D007131 4.9e-137 491.5 318 78.9
Glyma.20G208100 Glycine max HOM05D005591 ORTHO05D007131 6.4e-137 491.1 318 79.2
Psat5g221840 Pisum sativum HOM05D005591 ORTHO05D007131 1.4e-136 490.0 311 80.1
Glyma.10G181900 Glycine max HOM05D005591 ORTHO05D007131 3.2e-136 488.8 313 80.2
TWI34G1086 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 3.2e-136 488.8 318 77.4
Nitab4.5_0006072g0030 Nicotiana tabacum HOM05D005591 ORTHO05D007131 4.1e-136 488.4 324 79.0
PGSC0003DMG402024734 Solanum tuberosum HOM05D005591 ORTHO05D007131 5.4e-136 488.0 318 79.6
Ca_26812_v3 Cicer arietinum L. HOM05D005591 ORTHO05D007131 7.0e-136 487.6 304 82.2
TPR.G25529 Trifolium pratense HOM05D005591 ORTHO05D007131 7.0e-136 487.6 311 80.4
TPR.G37202 Trifolium pratense HOM05D005591 ORTHO05D007131 1.2e-135 486.9 311 80.1
Lalb_Chr12g0205911 Lupinus albus HOM05D005591 ORTHO05D007131 1.6e-135 486.5 308 80.5
TWI60G1035 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 1.6e-135 486.5 318 78.3
MSTRG.18314 Avicennia marina HOM05D005591 ORTHO05D007131 2.0e-135 486.1 318 79.6
arahy.Tifrunner.gnm1.ann1.8VB164 Arachis hypogaea HOM05D005591 ORTHO05D007131 2.7e-135 485.7 306 81.0
SalBow4G1598 Salvia bowleyana HOM05D005591 ORTHO05D007131 2.7e-135 485.7 320 78.4
CAN.G1648.2 Capsicum annuum HOM05D005591 ORTHO05D007131 3.5e-135 485.3 318 79.6
PGR083G2576 Punica granatum HOM05D005591 ORTHO05D007131 6.0e-135 484.6 319 79.9
TAR375G0642 Trochodendron aralioides HOM05D005591 ORTHO05D007131 7.8e-135 484.2 321 78.8
Manes.16G070000 Manihot esculenta HOM05D005591 ORTHO05D007131 1.0e-134 483.8 318 78.9
SalBow4G1474 Salvia bowleyana HOM05D005591 ORTHO05D007131 1.0e-134 483.8 320 78.1
ClCG08G003960 Citrullus lanatus HOM05D005591 ORTHO05D007131 1.3e-134 483.4 310 80.0
Solyc01g100250.3 Solanum lycopersicum HOM05D005591 ORTHO05D007131 3.9e-134 481.9 318 78.6
CsaV3_6G003160 Cucumis sativus L. HOM05D005591 ORTHO05D007131 8.6e-134 480.7 311 80.1
AT1G19800 Arabidopsis thaliana HOM05D005591 ORTHO05D007131 3.3e-133 478.8 318 75.5
ClCG00G002040 Citrullus lanatus HOM05D005591 ORTHO05D007131 3.3e-133 478.8 308 80.2
Lj3g0022648 Lotus japonicus HOM05D005591 ORTHO05D007131 9.5e-133 477.2 328 76.5
MELO3C011502.2 Cucumis melo HOM05D005591 ORTHO05D007131 1.6e-132 476.5 310 80.3
AL1G32520 Arabidopsis lyrata HOM05D005591 ORTHO05D007131 1.8e-131 473.0 318 75.5
Sed0000259 Sechium edule HOM05D005591 ORTHO05D007131 2.3e-131 472.6 311 78.1
THA.LOC104827705 Tarenaya hassleriana HOM05D005591 ORTHO05D007131 6.8e-131 471.1 292 81.2
Peaxi162Scf00673g00002 Petunia axillaris HOM05D005591 ORTHO05D007131 1.5e-130 469.9 318 77.4
Thhalv10008071m.g Eutrema salsugineum HOM05D005591 ORTHO05D007131 9.8e-130 467.2 301 78.4
BcaB03g12900 Brassica carinata HOM05D005591 ORTHO05D007131 2.2e-129 466.1 302 78.1
BcaC07g38997 Brassica carinata HOM05D005591 ORTHO05D007131 6.4e-129 464.5 302 77.5
C08p19710 Brassica napus HOM05D005591 ORTHO05D007131 6.4e-129 464.5 302 77.5
CARHR020310 Cardamine hirsuta HOM05D005591 ORTHO05D007131 8.3e-129 464.2 307 78.2
AUR62010234 Chenopodium quinoa HOM05D005591 ORTHO05D007131 1.1e-128 463.8 303 77.9
BolC8t49608H Brassica oleracea HOM05D005591 ORTHO05D007131 1.4e-128 463.4 302 77.2
AUR62013219 Chenopodium quinoa HOM05D005591 ORTHO05D007131 1.4e-128 463.4 309 76.7
Sp1g17610 Schrenkiella parvula HOM05D005591 ORTHO05D007131 1.4e-128 463.4 302 77.8
Aqoxy5G02725 Aquilegia oxysepala HOM05D005591 ORTHO05D007131 2.4e-128 462.6 294 81.6
Aa31LG7G4330 Aethionema arabicum HOM05D005591 ORTHO05D007131 3.2e-128 462.2 302 77.5
EL10Ac9g21576 Beta vulgaris HOM05D005591 ORTHO05D007131 3.2e-128 462.2 303 77.6
C05p18230 Brassica napus HOM05D005591 ORTHO05D007131 5.4e-128 461.5 299 78.6
Nn3g18591 Nelumbo nucifera HOM05D005591 ORTHO05D007131 7.0e-128 461.1 292 82.2
Carub.0001s1933 Capsella rubella HOM05D005591 ORTHO05D007131 9.2e-128 460.7 320 74.1
COL.COLO4_08690 Corchorus olitorius HOM05D005591 ORTHO05D007131 1.6e-127 459.9 292 81.2
BolC5t30530H Brassica oleracea HOM05D005591 ORTHO05D007131 7.8e-127 457.6 299 78.3
BraA06t24698Z Brassica rapa HOM05D005591 ORTHO05D007131 7.8e-127 457.6 299 78.3
A06p15920 Brassica napus HOM05D005591 ORTHO05D007131 1.7e-126 456.4 293 79.2
MBI07_g20439_MAGBIO Magnolia biondii HOM05D005591 ORTHO05D007131 6.6e-126 454.5 303 76.9
Haze_12970 Corylus avellana HOM05D005591 ORTHO05D007131 2.5e-125 452.6 311 76.5
SGA_v2.0_scaffold1G00602 Striga asiatica HOM05D005591 ORTHO05D002031 3.3e-125 452.2 304 74.7
GSVIVG01031642001 Vitis vinifera HOM05D005591 ORTHO05D007131 7.3e-125 451.1 318 74.8
Eucgr.E02433 Eucalyptus grandis HOM05D005591 ORTHO05D007131 1.6e-124 449.9 314 74.8
SGA_v2.0_scaffold90G27691 Striga asiatica HOM05D005591 ORTHO05D007131 2.8e-124 449.1 292 77.4
Oeu061431.3 Olea europaea HOM05D005591 ORTHO05D007131 1.4e-123 446.8 312 74.4
Haze_05998 Corylus avellana HOM05D005591 ORTHO05D007131 1.2e-122 443.7 299 77.6
Gohir.D10G133600 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.2e-122 443.7 318 74.8
Atru.chr7.136 Acer truncatum HOM05D005591 ORTHO05D007131 1.5e-122 443.4 315 73.7
Lsat_1_v5_gn_1_5881 Lactuca sativa HOM05D005591 ORTHO05D007131 3.4e-122 442.2 316 74.1
Cfa014468 Carpinus fangiana HOM05D005591 ORTHO05D007131 5.8e-122 441.4 299 78.3
Prupe.4G148300 Prunus persica HOM05D005591 ORTHO05D007131 2.2e-121 439.5 315 71.4
MD05G1209200 Malus domestica HOM05D005591 ORTHO05D007131 2.9e-121 439.1 314 72.0
Cc11_g03530 Coffea canephora HOM05D005591 ORTHO05D007131 1.2e-119 433.7 315 73.7
RcHm_v2.0_Chr5g0027591 Rosa chinensis HOM05D005591 ORTHO05D007131 1.2e-119 433.7 315 71.4
MD10G1195600 Malus domestica HOM05D005591 ORTHO05D007131 1.6e-119 433.3 314 72.0
ATR0681G262 Amborella trichopoda HOM05D005591 ORTHO05D007131 2.1e-119 433.0 273 81.0
FAN16G2920 Fragaria x ananassa HOM05D005591 ORTHO05D007131 6.0e-119 431.4 315 71.4
FvH4_3g16560 Fragaria vesca HOM05D005591 ORTHO05D007131 1.3e-118 430.3 315 71.1
SHI22008 Sapria himalayana HOM05D005591 ORTHO05D007131 3.0e-118 429.1 314 71.7
FAN11G3688 Fragaria x ananassa HOM05D005591 ORTHO05D007131 6.6e-118 427.9 315 70.8
FAN21G2901 Fragaria x ananassa HOM05D005591 ORTHO05D007131 8.6e-118 427.6 315 71.4
Duzib151G0749 Durio zibethinus HOM05D005591 ORTHO05D007131 7.3e-117 424.5 246 89.0
Sopen01g043760 Solanum pennellii HOM05D005591 ORTHO05D007131 3.6e-116 422.2 282 78.0
Hund00109 Selenicereus undatus HOM05D005591 ORTHO05D007131 1.4e-115 420.2 307 71.0
CAN.G1273.6 Capsicum annuum HOM05D005591 ORTHO05D007131 3.1e-115 419.1 317 69.4
Sc08g0001750 Simmondsia chinensis HOM05D005591 ORTHO05D007131 4.0e-115 418.7 320 70.6
HanXRQChr10g0315741 Helianthus annuus HOM05D005591 ORTHO05D007131 3.8e-113 412.1 288 74.7
PSO063G3984 Papaver somniferum HOM05D005591 ORTHO05D007131 3.8e-113 412.1 307 70.7
Migut.D00413 Erythranthe guttata HOM05D005591 ORTHO05D007131 1.1e-112 410.6 318 68.6
PSO339G5872 Papaver somniferum HOM05D005591 ORTHO05D007131 1.1e-112 410.6 307 70.4
CANSAT78G0984 Cannabis sativa HOM05D005591 ORTHO05D007131 3.2e-112 409.1 317 68.5
ECA232G4773 Erigeron canadensis HOM05D005591 ORTHO05D007131 3.2e-112 409.1 291 73.2
FAN25G3010 Fragaria x ananassa HOM05D005591 ORTHO05D007131 3.6e-108 395.6 315 67.9
CDE02G1973 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 4.0e-107 392.1 291 70.4
Os04g0553000 Oryza sativa ssp. japonica HOM05D005591 ORTHO05D007131 4.4e-106 388.7 258 76.4
Zm00001eb074560 Zea mays HOM05D005591 ORTHO05D007131 9.9e-106 387.5 262 75.2
SEGI_17332 Sequoiadendron giganteum HOM05D005591 ORTHO05D007131 1.3e-105 387.1 289 69.2
SMO367G0743 Selaginella moellendorffii HOM05D005591 ORTHO05D007131 6.4e-105 384.8 298 67.1
Rhsim02G0070200 Rhododendron simsii HOM05D005591 ORTHO05D007131 7.1e-104 381.3 315 67.6
Pp3c1_16480 Physcomitrium patens HOM05D005591 ORTHO05D007131 2.1e-103 379.8 274 71.9
BcaB07g31994 Brassica carinata HOM05D005591 ORTHO05D007131 5.1e-102 375.2 299 67.6
CBR_g24384 Chara braunii HOM05D005591 ORTHO05D007131 1.1e-101 374.0 262 71.4
Mapoly0204s0010 Marchantia polymorpha HOM05D005591 ORTHO05D007131 3.3e-101 372.5 296 64.9
Medtr3g008040 Medicago truncatula HOM05D005591 ORTHO05D007131 4.8e-100 368.6 279 71.3
AagrBONN_evm.TU.Sc2ySwM_117.3947 Anthoceros agrestis HOM05D005591 ORTHO05D007131 6.0e-95 351.7 245 73.9
Cre06.g268200 Chlamydomonas reinhardtii HOM05D005591 ORTHO05D007131 1.1e-88 330.9 252 65.1
HPP92_028331 Vanilla planifolia HOM05D005591 ORTHO05D007131 8.2e-84 314.7 269 65.1
PRCOL_00005194 Prasinoderma coloniale HOM05D005591 ORTHO05D007131 2.4e-83 313.2 256 61.7
Cpa.g.sc8.310 Carica papaya HOM05D005591 ORTHO05D007131 1.0e-81 307.8 177 91.5
MCO01G348 Micromonas commoda HOM05D005591 ORTHO05D007131 2.2e-73 280.0 249 59.4
vmacro15598 Vaccinium macrocarpon HOM05D005591 ORTHO05D007131 3.8e-73 279.3 283 57.2
unitig_22.g5460 Utricularia gibba HOM05D005591 ORTHO05D007131 1.4e-70 270.8 170 77.6
CDE11G0925 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 6.3e-68 261.9 191 74.9
CBR_g4088 Chara braunii HOM05D005591 ORTHO05D007131 3.1e-51 206.5 157 68.8
CBR_g4089 Chara braunii HOM05D005591 ORTHO05D007131 8.3e-44 181.8 161 58.4
unitig_22.g5461 Utricularia gibba HOM05D005591 ORTHO05D007131 2.7e-42 176.8 103 89.3
DCAR_018469 Daucus carota HOM05D005591 ORTHO05D007131 3.4e-37 159.8 103 81.6
DCAR_018470 Daucus carota HOM05D005591 ORTHO05D007131 3.4e-37 159.8 103 81.6
BraA08t34904Z Brassica rapa HOM05D005591 ORTHO05D011946 4.8e-36 156.0 122 67.2
Ca_28569_v3 Cicer arietinum L. HOM05D005591 ORTHO05D149412 5.8e-21 105.9 218 31.2
BcaC05g25857 Brassica carinata HOM05D005591 ORTHO05D007131 1.7e-20 104.4 63 84.1
Actinidia29179 Actinidia chinensis HOM05D005591 ORTHO05D007131 4.9e-20 102.8 176 40.9
Cc01_g18470 Coffea canephora HOM05D005591 ORTHO05D007131 1.9e-11 74.3 44 72.7


User provided reference genes

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