Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C893G11 Lonicera japonica HOM05D001598 ORTHO05D007192 5.1e-260 900.6 463 100.0
Dinv32128 Davidia involucrata HOM05D001598 ORTHO05D007192 2.2e-210 735.7 476 79.4
vmacro14297 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 2.6e-200 702.2 481 76.7
CSS0038227 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 3.5e-200 701.8 476 76.7
CSS0048937 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 3.5e-200 701.8 476 76.7
Rhsim01G0197500 Rhododendron simsii HOM05D001598 ORTHO05D007192 1.9e-198 696.0 476 75.6
TAR375G0698 Trochodendron aralioides HOM05D001598 ORTHO05D007192 2.4e-193 679.1 476 73.1
Hma1.2p1_0218F.1_g092460 Hydrangea macrophylla HOM05D001598 ORTHO05D007192 3.8e-191 671.8 476 72.3
CiPaw.13G127200 Carya illinoinensis HOM05D001598 ORTHO05D007192 1.3e-186 656.8 476 72.7
COL.COLO4_25318 Corchorus olitorius HOM05D001598 ORTHO05D007192 3.7e-186 655.2 478 71.8
Potri.009G156400 Populus trichocarpa HOM05D001598 ORTHO05D007192 1.4e-185 653.3 476 71.4
Atru.chr3.2751 Acer truncatum HOM05D001598 ORTHO05D007192 9.1e-185 650.6 476 71.4
Manes.11G103300 Manihot esculenta HOM05D001598 ORTHO05D007192 3.5e-184 648.7 476 70.8
Prupe.6G153900 Prunus persica HOM05D001598 ORTHO05D007192 6.5e-183 644.4 476 68.5
Ciclev10014503m.g Citrus clementina HOM05D001598 ORTHO05D007192 1.1e-182 643.7 476 69.7
DCAR_000741 Daucus carota HOM05D001598 ORTHO05D007192 1.5e-182 643.3 476 69.3
Eucgr.J00614 Eucalyptus grandis HOM05D001598 ORTHO05D007192 1.9e-182 642.9 476 69.3
Lj2A895G19 Lonicera japonica HOM05D001598 ORTHO05D007192 1.9e-182 642.9 428 82.2
CANSAT54G2824 Cannabis sativa HOM05D001598 ORTHO05D007192 5.5e-182 641.3 476 69.5
MD11G1181200 Malus domestica HOM05D001598 ORTHO05D007192 7.2e-182 641.0 476 68.5
Gorai.009G080100 Gossypium raimondii HOM05D001598 ORTHO05D007192 9.4e-182 640.6 478 70.1
Solyc01g009050.3 Solanum lycopersicum HOM05D001598 ORTHO05D007192 3.6e-181 638.6 476 69.1
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 6.1e-181 637.9 478 69.9
Sopen01g004540 Solanum pennellii HOM05D001598 ORTHO05D007192 6.1e-181 637.9 476 69.7
Actinidia22467 Actinidia chinensis HOM05D001598 ORTHO05D007192 8.0e-181 637.5 476 71.4
Sabra09G0122500 Salix brachista HOM05D001598 ORTHO05D007192 8.8e-180 634.0 476 70.4
Gohir.A05G076000 Gossypium hirsutum HOM05D001598 ORTHO05D007192 1.2e-179 633.6 478 69.2
Cc01_g07890 Coffea canephora HOM05D001598 ORTHO05D007192 2.6e-179 632.5 484 66.7
Glyma.02G272700 Glycine max HOM05D001598 ORTHO05D007192 3.4e-179 632.1 476 68.3
CAN.G651.7 Capsicum annuum HOM05D001598 ORTHO05D007192 4.4e-179 631.7 476 69.3
CARHR191850 Cardamine hirsuta HOM05D001598 ORTHO05D007192 1.7e-178 629.8 476 67.0
Nitab4.5_0002300g0120 Nicotiana tabacum HOM05D001598 ORTHO05D007192 2.8e-178 629.0 476 68.1
BraA03t10351Z Brassica rapa HOM05D001598 ORTHO05D007192 2.4e-177 625.9 478 66.7
AL6G32560 Arabidopsis lyrata HOM05D001598 ORTHO05D007192 4.1e-177 625.2 476 66.8
Aqoxy3G02341 Aquilegia oxysepala HOM05D001598 ORTHO05D007192 1.2e-176 623.6 476 67.6
GSVIVG01037501001 Vitis vinifera HOM05D001598 ORTHO05D007192 1.2e-176 623.6 476 69.1
C03p11930 Brassica napus HOM05D001598 ORTHO05D007192 2.7e-176 622.5 476 66.4
LjContig00564g0017485 Lotus japonicus HOM05D001598 ORTHO05D007192 2.7e-176 622.5 476 68.5
AT5G20990 Arabidopsis thaliana HOM05D001598 ORTHO05D007192 4.5e-176 621.7 476 66.2
Sp6g23530 Schrenkiella parvula HOM05D001598 ORTHO05D007192 4.5e-176 621.7 478 66.5
A03p10390 Brassica napus HOM05D001598 ORTHO05D007192 5.9e-176 621.3 478 66.1
BolC3t13663H Brassica oleracea HOM05D001598 ORTHO05D007192 1.3e-175 620.2 478 66.3
RcHm_v2.0_Chr5g0048741 Rosa chinensis HOM05D001598 ORTHO05D007192 1.3e-175 620.2 476 67.2
ECA247G1799 Erigeron canadensis HOM05D001598 ORTHO05D007192 8.6e-175 617.5 480 66.9
Thhalv10012894m.g Eutrema salsugineum HOM05D001598 ORTHO05D007192 8.6e-175 617.5 478 66.7
HanXRQChr06g0180651 Helianthus annuus HOM05D001598 ORTHO05D007192 1.1e-174 617.1 476 66.6
PSO063G3947 Papaver somniferum HOM05D001598 ORTHO05D007192 1.5e-174 616.7 480 66.5
Carub.0006s1931 Capsella rubella HOM05D001598 ORTHO05D007192 1.9e-174 616.3 478 66.5
AUR62020182 Chenopodium quinoa HOM05D001598 ORTHO05D007192 4.3e-174 615.1 476 67.9
TWI31G0930 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 1.6e-173 613.2 476 67.6
Phvul.008G209600 Phaseolus vulgaris HOM05D001598 ORTHO05D007192 2.8e-173 612.5 476 66.2
FvH4_3g26260 Fragaria vesca HOM05D001598 ORTHO05D007192 3.6e-173 612.1 476 65.8
arahy.Tifrunner.gnm1.ann1.4UW9RQ Arachis hypogaea HOM05D001598 ORTHO05D007192 4.7e-173 611.7 484 66.1
MBI07_g03077_MAGBIO Magnolia biondii HOM05D001598 ORTHO05D007192 1.8e-172 609.8 468 67.1
arahy.Tifrunner.gnm1.ann1.IS34PQ Arachis hypogaea HOM05D001598 ORTHO05D007192 2.3e-172 609.4 484 65.7
Sc21g0006570 Simmondsia chinensis HOM05D001598 ORTHO05D007192 6.8e-172 607.8 483 65.6
SGA_v2.0_scaffold16G07584 Striga asiatica HOM05D001598 ORTHO05D007192 6.8e-172 607.8 477 65.2
Sed0001025 Sechium edule HOM05D001598 ORTHO05D007192 8.9e-172 607.4 475 64.8
Lalb_Chr10g0105801 Lupinus albus HOM05D001598 ORTHO05D007192 1.5e-171 606.7 476 66.2
PGR119G0245 Punica granatum HOM05D001598 ORTHO05D007192 1.5e-171 606.7 476 67.0
MSTRG.12417 Avicennia marina HOM05D001598 ORTHO05D007192 9.8e-171 604.0 476 66.2
MELO3C015599.2 Cucumis melo HOM05D001598 ORTHO05D007192 1.7e-170 603.2 476 65.5
VMungo0647G2429 Vigna mungo HOM05D001598 ORTHO05D007192 1.7e-170 603.2 476 66.2
CsaV3_1G041840 Cucumis sativus L. HOM05D001598 ORTHO05D007192 2.2e-170 602.8 476 65.8
EL10Ac7g16239 Beta vulgaris HOM05D001598 ORTHO05D007192 6.4e-170 601.3 512 63.3
Medtr5g087490 Medicago truncatula HOM05D001598 ORTHO05D007192 1.8e-169 599.7 476 65.3
Lsat_1_v5_gn_2_37520 Lactuca sativa HOM05D001598 ORTHO05D007192 2.7e-168 595.9 480 66.2
SalBow3G4459 Salvia bowleyana HOM05D001598 ORTHO05D007192 4.6e-168 595.1 478 64.6
TPR.G11692 Trifolium pratense HOM05D001598 ORTHO05D007192 5.9e-168 594.7 476 64.7
Migut.N02410 Erythranthe guttata HOM05D001598 ORTHO05D007192 1.0e-167 594.0 476 64.7
ClCG03G014390 Citrullus lanatus HOM05D001598 ORTHO05D007192 4.3e-166 588.6 477 64.2
Hund20974 Selenicereus undatus HOM05D001598 ORTHO05D007192 1.2e-165 587.0 477 65.2
Aa31LG1G13740 Aethionema arabicum HOM05D001598 ORTHO05D007192 8.3e-162 574.3 476 62.2
Haze_23633 Corylus avellana HOM05D001598 ORTHO05D007192 1.9e-161 573.2 483 63.8
Nitab4.5_0000428g0110 Nicotiana tabacum HOM05D001598 ORTHO05D007192 8.6e-159 564.3 461 64.6
unitig_8.g2986 Utricularia gibba HOM05D001598 ORTHO05D007192 2.1e-157 559.7 480 62.3
Zm00001eb432770 Zea mays HOM05D001598 ORTHO05D007192 6.2e-157 558.1 482 61.2
ATR0215G007 Amborella trichopoda HOM05D001598 ORTHO05D007192 2.3e-156 556.2 481 61.1
FAN25G1601 Fragaria x ananassa HOM05D001598 ORTHO05D007192 3.1e-156 555.8 476 61.3
FAN21G0325 Fragaria x ananassa HOM05D001598 ORTHO05D007192 8.9e-156 554.3 476 61.1
Peaxi162Scf00050g02227 Petunia axillaris HOM05D001598 ORTHO05D007192 2.9e-154 549.3 469 63.1
QL01p007286 Quercus lobata HOM05D001598 ORTHO05D007192 3.2e-153 545.8 390 72.1
FAN11G2542 Fragaria x ananassa HOM05D001598 ORTHO05D007192 9.2e-153 544.3 476 60.1
AUR62001598 Chenopodium quinoa HOM05D001598 ORTHO05D007192 3.9e-151 538.9 507 59.4
Ah.08g222590 Amaranthus hybridus HOM05D001598 ORTHO05D007192 1.1e-150 537.3 426 67.4
Psat2g023160 Pisum sativum HOM05D001598 ORTHO05D007192 5.6e-150 535.0 425 65.9
Cpa.g.sc34.224 Carica papaya HOM05D001598 ORTHO05D007192 4.4e-147 525.4 437 65.0
Oeu051504.1 Olea europaea HOM05D001598 ORTHO05D007192 5.8e-147 525.0 481 61.5
Thecc.09G265000 Theobroma cacao HOM05D001598 ORTHO05D007192 2.5e-142 509.6 481 58.8
CDE02G2133 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 3.3e-142 509.2 482 56.6
Pp3c14_4050 Physcomitrium patens HOM05D001598 ORTHO05D007192 2.1e-141 506.5 496 54.4
Ca_06138_v3 Cicer arietinum L. HOM05D001598 ORTHO05D007192 1.6e-136 490.3 476 56.9
HPP92_013469 Vanilla planifolia HOM05D001598 ORTHO05D007192 2.5e-126 456.4 406 58.1
SMO145G0256 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 4.5e-123 445.7 476 50.6
CDE06G2705 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 5.8e-123 445.3 508 50.6
HPP92_013468 Vanilla planifolia HOM05D001598 ORTHO05D007192 8.4e-122 441.4 506 50.2
AagrBONN_evm.TU.Sc2ySwM_228.3025 Anthoceros agrestis HOM05D001598 ORTHO05D007192 1.1e-118 431.0 488 49.8
SEGI_00915 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 5.5e-113 412.1 347 62.2
SEGI_02371 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 1.2e-112 411.0 346 62.1
Cre10.g451400 Chlamydomonas reinhardtii HOM05D001598 ORTHO05D007192 7.4e-110 401.7 460 48.0
Mapoly1495s0001 Marchantia polymorpha HOM05D001598 ORTHO05D007192 6.7e-103 378.6 386 53.1
AagrBONN_evm.TU.Sc2ySwM_117.1323 Anthoceros agrestis HOM05D001598 ORTHO05D007192 4.4e-86 322.8 396 45.2
SHI25335 Sapria himalayana HOM05D001598 ORTHO05D000001 2.0e-83 313.9 232 65.9
Atru.ctg664.11 Acer truncatum HOM05D001598 ORTHO05D007192 4.2e-81 306.2 315 56.2
MCO09G295 Micromonas commoda HOM05D001598 ORTHO05D007192 4.5e-75 286.2 449 40.8
vmacro23059 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 1.2e-64 251.5 249 59.8
TPR.G11462 Trifolium pratense HOM05D001598 ORTHO05D007192 2.8e-64 250.4 285 50.9
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 2.2e-61 240.7 424 37.7
Nn1g00103 Nelumbo nucifera HOM05D001598 ORTHO05D007192 7.8e-43 179.1 137 67.2
TPR.G24627 Trifolium pratense HOM05D001598 ORTHO05D007192 1.3e-37 161.8 145 60.0
QL01p007301 Quercus lobata HOM05D001598 ORTHO05D007192 2.6e-30 137.5 90 78.9
CBR_g53784 Chara braunii HOM05D001598 ORTHO05D007192 3.2e-28 130.6 147 47.6
HanXRQChr07g0205981 Helianthus annuus HOM05D001598 ORTHO05D007192 5.4e-28 129.8 90 73.3
SHI25334 Sapria himalayana HOM05D001598 ORTHO05D000001 2.5e-25 120.9 90 70.0
Mapoly0056s0125 Marchantia polymorpha HOM05D001598 ORTHO05D007192 7.6e-22 109.4 76 67.1
Ca_14173_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 4.9e-21 106.7 96 61.5
Ca_02574_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 6.4e-21 106.3 159 42.8
CBR_g53773 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-17 95.5 114 44.7
Os04g0661600 Oryza sativa ssp. japonica HOM05D001598 ORTHO05D007192 7.6e-14 82.8 61 68.9
Gohir.D02G147550 Gossypium hirsutum HOM05D006828 ORTHO05D008312 2.9e-13 80.9 49 81.6
Gorai.013G167300 Gossypium raimondii HOM05D006828 ORTHO05D008312 2.9e-13 80.9 49 81.6
Gohir.D05G085901 Gossypium hirsutum HOM05D001598 ORTHO05D008312 2.7e-11 74.3 49 75.5
TPR.G22712 Trifolium pratense HOM05D001598 ORTHO05D046738 2.7e-11 74.3 89 47.2
Zm00001eb067470 Zea mays HOM05D001598 ORTHO05D007192 9.6e-09 65.9 92 44.6
SMO307G0084 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 1.6e-08 65.1 62 46.8
TWI56G1164 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 4.8e-08 63.5 44 68.2
SGA_v2.0_scaffold6G03251 Striga asiatica HOM05D001598 ORTHO05D007192 1.8e-07 61.6 97 38.1
Glyma.16G121250 Glycine max HOM05D001598 ORTHO05D046738 6.9e-07 59.7 64 53.1
Sc01g0005570 Simmondsia chinensis HOM05D001598 ORTHO05D007192 9.0e-07 59.3 67 47.8


User provided reference genes

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