Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C504G7 Lonicera japonica HOM05D003539 ORTHO05D004111 0.0e+00 1202.2 611 100.0
Dinv40214 Davidia involucrata HOM05D003539 ORTHO05D004111 2.9e-223 778.9 528 74.4
Dinv28297 Davidia involucrata HOM05D003539 ORTHO05D004111 8.5e-223 777.3 528 74.8
Lsat_1_v5_gn_5_30740 Lactuca sativa HOM05D003539 ORTHO05D004111 9.8e-219 763.8 518 73.6
CSS0035723 Camellia sinensis var. sinensis HOM05D003539 ORTHO05D004111 3.3e-214 748.8 528 72.2
GSVIVG01026448001 Vitis vinifera HOM05D003539 ORTHO05D004111 7.2e-214 747.7 528 71.6
Hma1.2p1_0085F.1_g044410 Hydrangea macrophylla HOM05D003539 ORTHO05D004111 1.6e-213 746.5 532 71.8
ECA233G1070 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.8e-207 725.3 509 70.3
vmacro18474 Vaccinium macrocarpon HOM05D003539 ORTHO05D004111 6.6e-207 724.5 524 69.7
Oeu063413.2 Olea europaea HOM05D003539 ORTHO05D004111 1.1e-206 723.8 532 68.4
HanXRQChr16g0510861 Helianthus annuus HOM05D003539 ORTHO05D004111 7.3e-206 721.1 517 70.4
Oeu010807.1 Olea europaea HOM05D003539 ORTHO05D004111 2.8e-205 719.2 532 68.2
Cc07_g12170 Coffea canephora HOM05D003539 ORTHO05D004111 1.8e-204 716.5 530 70.2
Eucgr.J02557 Eucalyptus grandis HOM05D003539 ORTHO05D004111 1.9e-198 696.4 529 66.9
Nn5g28137 Nelumbo nucifera HOM05D003539 ORTHO05D004111 2.8e-197 692.6 531 67.0
TAR381G1444 Trochodendron aralioides HOM05D003539 ORTHO05D004111 1.8e-196 689.9 529 66.5
HanXRQChr09g0270331 Helianthus annuus HOM05D003539 ORTHO05D004111 4.4e-195 685.3 511 67.1
Atru.chr3.55 Acer truncatum HOM05D003539 ORTHO05D004111 3.7e-194 682.2 530 67.5
TWI79G1391 Tripterygium wilfordii HOM05D003539 ORTHO05D004111 1.2e-192 677.2 527 65.7
MSTRG.20424 Avicennia marina HOM05D003539 ORTHO05D004111 7.8e-192 674.5 523 64.8
Sc06g0005250 Simmondsia chinensis HOM05D003539 ORTHO05D004111 1.1e-188 664.1 529 64.3
CiPaw.15G173100 Carya illinoinensis HOM05D003539 ORTHO05D004111 2.0e-187 659.8 526 65.4
Rhsim08G0026200 Rhododendron simsii HOM05D003539 ORTHO05D004111 8.3e-186 654.4 544 64.3
SGA_v2.0_scaffold36G14401 Striga asiatica HOM05D003539 ORTHO05D004111 1.1e-185 654.1 524 63.0
PGR044G1248 Punica granatum HOM05D003539 ORTHO05D004111 5.4e-185 651.7 528 61.9
QL06p053198 Quercus lobata HOM05D003539 ORTHO05D004111 5.4e-185 651.7 510 65.9
SGA_v2.0_scaffold172G38971 Striga asiatica HOM05D003539 ORTHO05D004111 1.2e-184 650.6 574 59.4
Gohir.D03G066500 Gossypium hirsutum HOM05D003539 ORTHO05D004111 6.0e-184 648.3 509 65.6
Manes.01G157300 Manihot esculenta HOM05D003539 ORTHO05D004111 7.8e-184 647.9 540 63.5
Gorai.003G064600 Gossypium raimondii HOM05D003539 ORTHO05D004111 1.0e-183 647.5 509 65.6
CsaV3_3G008890 Cucumis sativus L. HOM05D003539 ORTHO05D004111 1.3e-183 647.1 528 63.4
Haze_03640 Corylus avellana HOM05D003539 ORTHO05D004111 3.0e-183 646.0 512 66.6
ClCG02G000270 Citrullus lanatus HOM05D003539 ORTHO05D004111 3.9e-183 645.6 551 62.3
Nitab4.5_0003096g0020 Nicotiana tabacum HOM05D003539 ORTHO05D004111 8.6e-183 644.4 535 62.2
Nitab4.5_0000588g0180 Nicotiana tabacum HOM05D003539 ORTHO05D004111 1.1e-182 644.0 531 62.5
Nitab4.5_0000855g0080 Nicotiana tabacum HOM05D003539 ORTHO05D004111 1.5e-182 643.7 591 58.7
Cfa007110 Carpinus fangiana HOM05D003539 ORTHO05D004111 5.6e-182 641.7 512 66.2
Thecc.01G002200 Theobroma cacao HOM05D003539 ORTHO05D004111 3.6e-181 639.0 510 65.1
Sed0013779 Sechium edule HOM05D003539 ORTHO05D004111 1.4e-180 637.1 528 62.9
Sed0003470 Sechium edule HOM05D003539 ORTHO05D004111 6.8e-180 634.8 528 62.5
CAN.G1428.5 Capsicum annuum HOM05D003539 ORTHO05D004111 5.8e-179 631.7 528 62.1
Solyc02g082340.3 Solanum lycopersicum HOM05D003539 ORTHO05D004111 1.3e-178 630.6 528 62.1
CANSAT35G0647 Cannabis sativa HOM05D003539 ORTHO05D004111 1.7e-178 630.2 529 61.8
Sopen02g027000 Solanum pennellii HOM05D003539 ORTHO05D004111 2.2e-178 629.8 528 61.9
Glyma.09G196200 Glycine max HOM05D003539 ORTHO05D004111 1.1e-177 627.5 527 60.7
Migut.A00468 Erythranthe guttata HOM05D003539 ORTHO05D004111 3.2e-177 625.9 524 59.5
TAR376G1176 Trochodendron aralioides HOM05D003539 ORTHO05D004111 3.2e-177 625.9 492 67.3
Lalb_Chr05g0229501 Lupinus albus HOM05D003539 ORTHO05D004111 4.6e-176 622.1 529 60.3
Glyma.16G112800 Glycine max HOM05D003539 ORTHO05D004111 3.0e-175 619.4 509 62.1
Lalb_Chr09g0334501 Lupinus albus HOM05D003539 ORTHO05D004111 1.1e-174 617.5 531 60.8
THA.LOC104814350 Tarenaya hassleriana HOM05D003539 ORTHO05D004111 2.8e-173 612.8 528 60.0
COL.COLO4_16224 Corchorus olitorius HOM05D003539 ORTHO05D004111 3.6e-173 612.5 510 62.0
ClCG05G001500 Citrullus lanatus HOM05D003539 ORTHO05D004111 7.6e-171 604.7 551 59.3
Manes.11G091200 Manihot esculenta HOM05D003539 ORTHO05D004111 2.9e-170 602.8 543 60.2
Hund21770 Selenicereus undatus HOM05D003539 ORTHO05D004111 2.9e-170 602.8 529 60.7
Haze_00123 Corylus avellana HOM05D003539 ORTHO05D004111 5.4e-169 598.6 489 64.8
Phvul.010G020100 Phaseolus vulgaris HOM05D003539 ORTHO05D004111 1.7e-167 593.6 521 58.3
EL10Ac4g09711 Beta vulgaris HOM05D003539 ORTHO05D004111 2.3e-167 593.2 517 59.4
Potri.005G098500 Populus trichocarpa HOM05D003539 ORTHO05D004111 2.3e-167 593.2 546 57.1
Lj4g0013403 Lotus japonicus HOM05D003539 ORTHO05D004111 3.0e-167 592.8 516 60.7
arahy.Tifrunner.gnm1.ann1.4LH58N Arachis hypogaea HOM05D003539 ORTHO05D004111 6.6e-167 591.7 617 51.2
arahy.Tifrunner.gnm1.ann1.PPI4NM Arachis hypogaea HOM05D003539 ORTHO05D004111 1.3e-165 587.4 595 53.1
Peaxi162Scf00677g00114 Petunia axillaris HOM05D003539 ORTHO05D004111 4.8e-165 585.5 528 58.7
arahy.Tifrunner.gnm1.ann1.VZS2MK Arachis hypogaea HOM05D003539 ORTHO05D004111 6.2e-165 585.1 630 50.3
arahy.Tifrunner.gnm1.ann1.UQ0JCX Arachis hypogaea HOM05D003539 ORTHO05D004111 8.1e-165 584.7 625 50.6
VMungo1309G1473 Vigna mungo HOM05D003539 ORTHO05D004111 4.0e-164 582.4 521 58.3
arahy.Tifrunner.gnm1.ann1.JIK3X3 Arachis hypogaea HOM05D003539 ORTHO05D004111 4.2e-161 572.4 593 51.3
Ca_21575_v3 Cicer arietinum L. HOM05D003539 ORTHO05D004111 4.2e-161 572.4 519 57.6
Duzib147G0916 Durio zibethinus HOM05D003539 ORTHO05D004111 7.4e-158 561.6 478 61.9
MBI04_g31205_MAGBIO Magnolia biondii HOM05D003539 ORTHO05D004111 7.4e-158 561.6 531 56.1
Sabra05G0080900 Salix brachista HOM05D003539 ORTHO05D004111 1.1e-156 557.8 501 57.5
MELO3C006107.2 Cucumis melo HOM05D003539 ORTHO05D004111 1.4e-156 557.4 435 65.7
Aa31LG10G6570 Aethionema arabicum HOM05D003539 ORTHO05D004111 9.0e-156 554.7 514 56.4
Psat7g042440 Pisum sativum HOM05D003539 ORTHO05D004111 9.9e-155 551.2 521 58.0
CARHR128910 Cardamine hirsuta HOM05D003539 ORTHO05D004111 1.9e-153 547.0 513 55.9
Prupe.7G186400 Prunus persica HOM05D003539 ORTHO05D004111 4.2e-153 545.8 531 58.6
Sp4g17040 Schrenkiella parvula HOM05D003539 ORTHO05D004111 5.5e-153 545.4 521 54.9
Aa31LG6G11830 Aethionema arabicum HOM05D003539 ORTHO05D004111 1.2e-152 544.3 529 55.6
Actinidia28753 Actinidia chinensis HOM05D003539 ORTHO05D004111 4.6e-152 542.3 513 58.5
MD02G1108900 Malus domestica HOM05D003539 ORTHO05D004111 3.9e-151 539.3 538 55.9
Medtr4g117680 Medicago truncatula HOM05D003539 ORTHO05D004111 8.7e-151 538.1 520 55.0
Peaxi162Scf00344g01722 Petunia axillaris HOM05D003539 ORTHO05D004111 8.7e-151 538.1 556 53.8
unitig_699.g19839 Utricularia gibba HOM05D003539 ORTHO05D004111 1.1e-150 537.7 521 55.1
Thhalv10007103m.g Eutrema salsugineum HOM05D003539 ORTHO05D004111 2.8e-149 533.1 509 56.0
AL4G30740 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 4.8e-149 532.3 516 55.2
Carub.0004s1644 Capsella rubella HOM05D003539 ORTHO05D004111 4.0e-148 529.3 517 54.5
Hund28202 Selenicereus undatus HOM05D003539 ORTHO05D004111 4.0e-148 529.3 555 53.3
Hund28214 Selenicereus undatus HOM05D003539 ORTHO05D004111 4.0e-148 529.3 555 53.3
AUR62006940 Chenopodium quinoa HOM05D003539 ORTHO05D004111 4.5e-147 525.8 501 55.7
Psat3g044960 Pisum sativum HOM05D003539 ORTHO05D004111 4.5e-147 525.8 518 56.2
Thhalv10016395m.g Eutrema salsugineum HOM05D003539 ORTHO05D004111 2.9e-146 523.1 517 54.2
Sc09g0001980 Simmondsia chinensis HOM05D003539 ORTHO05D004111 1.4e-145 520.8 416 64.4
PSO017G0405 Papaver somniferum HOM05D003539 ORTHO05D004111 2.5e-145 520.0 538 51.1
THA.LOC104798595 Tarenaya hassleriana HOM05D003539 ORTHO05D004111 3.2e-145 519.6 536 53.4
AT2G34750 Arabidopsis thaliana HOM05D003539 ORTHO05D004111 9.3e-145 518.1 515 54.2
Carub.0001s2885 Capsella rubella HOM05D003539 ORTHO05D004111 6.0e-144 515.4 512 55.7
Ah.06g188300 Amaranthus hybridus HOM05D003539 ORTHO05D004111 2.3e-143 513.5 533 53.7
PSO170G6051 Papaver somniferum HOM05D003539 ORTHO05D004111 3.9e-143 512.7 537 50.1
AL1G44630 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 1.5e-142 510.8 518 53.9
BolC3t14644H Brassica oleracea HOM05D003539 ORTHO05D004111 1.5e-142 510.8 525 53.0
BcaB06g28796 Brassica carinata HOM05D003539 ORTHO05D004111 4.3e-142 509.2 524 51.9
C03p22480 Brassica napus HOM05D003539 ORTHO05D004111 1.6e-141 507.3 525 52.8
Aqoxy6G01535 Aquilegia oxysepala HOM05D003539 ORTHO05D004111 2.2e-141 506.9 529 51.8
Cfa016374 Carpinus fangiana HOM05D003539 ORTHO05D004111 2.2e-141 506.9 484 56.4
Aqoxy3G00418 Aquilegia oxysepala HOM05D003539 ORTHO05D004111 3.7e-141 506.1 533 52.9
BraA03t11183Z Brassica rapa HOM05D003539 ORTHO05D004111 3.1e-140 503.1 530 52.5
Aqoxy3G00897 Aquilegia oxysepala HOM05D003539 ORTHO05D004111 4.1e-140 502.7 485 57.3
TPR.G29658 Trifolium pratense HOM05D003539 ORTHO05D004111 2.0e-139 500.4 537 51.6
A03p19290 Brassica napus HOM05D003539 ORTHO05D004111 5.9e-139 498.8 529 52.0
RcHm_v2.0_Chr2g0096801 Rosa chinensis HOM05D003539 ORTHO05D004111 1.0e-138 498.0 537 53.6
BraA04t18159Z Brassica rapa HOM05D003539 ORTHO05D004111 3.8e-138 496.1 552 50.0
A04p26550 Brassica napus HOM05D003539 ORTHO05D004111 4.2e-137 492.7 532 50.2
FAN26G1725 Fragaria x ananassa HOM05D003539 ORTHO05D004111 3.3e-134 483.0 521 53.0
FvH4_1g10010 Fragaria vesca HOM05D003539 ORTHO05D004111 5.7e-134 482.3 537 52.0
FAN28G2151 Fragaria x ananassa HOM05D003539 ORTHO05D004111 7.4e-134 481.9 537 51.8
AUR62000583 Chenopodium quinoa HOM05D003539 ORTHO05D004111 2.2e-133 480.3 519 51.8
FAN19G1026 Fragaria x ananassa HOM05D003539 ORTHO05D004111 2.0e-131 473.8 548 50.9
FAN23G2523 Fragaria x ananassa HOM05D003539 ORTHO05D004111 1.3e-130 471.1 540 50.7
Os06g0688100 Oryza sativa ssp. japonica HOM05D003539 ORTHO05D004111 5.0e-130 469.2 536 48.3
CDE07G0217 Ceratophyllum demersum HOM05D003539 ORTHO05D004111 3.9e-127 459.5 479 52.4
SEGI_33601 Sequoiadendron giganteum HOM05D003539 ORTHO05D004111 1.1e-126 458.0 556 46.8
AT1G30590 Arabidopsis thaliana HOM05D003539 ORTHO05D004111 1.5e-126 457.6 512 50.0
ATR0605G358 Amborella trichopoda HOM05D003539 ORTHO05D004111 2.8e-125 453.4 559 46.5
Peaxi162Scf00015g00939 Petunia axillaris HOM05D003539 ORTHO05D004111 5.3e-124 449.1 527 49.9
BolC4t22991H Brassica oleracea HOM05D003539 ORTHO05D004111 7.0e-124 448.7 521 49.3
Gohir.A02G120000 Gossypium hirsutum HOM05D003539 ORTHO05D004111 2.6e-123 446.8 343 67.3
AL4G35010 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 1.0e-122 444.9 531 48.2
C04p14010 Brassica napus HOM05D003539 ORTHO05D004111 2.5e-121 440.3 521 48.9
SalBow7G2073 Salvia bowleyana HOM05D003539 ORTHO05D004111 1.6e-120 437.6 367 61.0
BraA05t20035Z Brassica rapa HOM05D003539 ORTHO05D004111 2.7e-120 436.8 514 48.2
Carub.0004s2129 Capsella rubella HOM05D003539 ORTHO05D004111 5.2e-119 432.6 522 46.9
Actinidia02872 Actinidia chinensis HOM05D003539 ORTHO05D004111 2.6e-118 430.3 320 69.7
Zm00001eb226160 Zea mays HOM05D003539 ORTHO05D004111 7.0e-116 422.2 522 47.1
AT2G39240 Arabidopsis thaliana HOM05D003539 ORTHO05D004111 1.5e-110 404.4 534 44.8
Actinidia20763 Actinidia chinensis HOM05D003539 ORTHO05D004111 3.3e-110 403.3 339 64.3
Mapoly0144s0013 Marchantia polymorpha HOM05D003539 ORTHO05D004111 2.4e-108 397.1 577 40.7
BcaC06g35972 Brassica carinata HOM05D003539 ORTHO05D004111 3.5e-107 393.3 512 45.7
C07p01640 Brassica napus HOM05D003539 ORTHO05D004111 2.9e-106 390.2 489 47.2
BcaC02g11551 Brassica carinata HOM05D003539 ORTHO05D004111 8.0e-104 382.1 532 44.9
BcaC01g05764 Brassica carinata HOM05D003539 ORTHO05D004111 2.4e-100 370.5 409 49.9
C04p63970 Brassica napus HOM05D003539 ORTHO05D004111 2.0e-99 367.5 446 46.9
SMO356G0429 Selaginella moellendorffii HOM05D003539 ORTHO05D004111 2.0e-99 367.5 558 39.2
Pp3c21_14490 Physcomitrium patens HOM05D003539 ORTHO05D004111 1.7e-98 364.4 576 38.4
Pp3c18_6750 Physcomitrium patens HOM05D003539 ORTHO05D004111 9.5e-97 358.6 551 38.8
Pp3c18_6751 Physcomitrium patens HOM05D003539 ORTHO05D004111 9.5e-97 358.6 551 38.8
AL4G36550 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 1.2e-91 341.7 426 48.1
AagrBONN_evm.TU.Sc2ySwM_368.2744 Anthoceros agrestis HOM05D003539 ORTHO05D004111 5.0e-90 336.3 561 37.3
FAN23G0637 Fragaria x ananassa HOM05D003539 ORTHO05D004111 3.1e-87 327.0 368 52.4
Oeu000297.1 Olea europaea HOM05D003539 ORTHO05D004111 2.0e-86 324.3 276 63.0
HPP92_018392 Vanilla planifolia HOM05D003539 ORTHO05D004111 1.1e-84 318.5 436 43.3
C07p01430 Brassica napus HOM05D003539 ORTHO05D004111 9.2e-76 288.9 352 48.6
DCAR_007549 Daucus carota HOM05D003539 ORTHO05D004111 8.1e-72 275.8 196 71.4
SHI13961 Sapria himalayana HOM05D003539 ORTHO05D004111 2.0e-70 271.2 343 46.1
Actinidia20762 Actinidia chinensis HOM05D003539 ORTHO05D004111 4.9e-69 266.5 195 69.7
DCAR_007550 Daucus carota HOM05D003539 ORTHO05D004111 1.1e-65 255.4 159 77.4
Ciclev10010838m.g Citrus clementina HOM05D003539 ORTHO05D004111 8.4e-61 239.2 191 63.4
GSVIVG01026439001 Vitis vinifera HOM05D003539 ORTHO05D004111 2.1e-56 224.6 169 64.5
SalBow7G0297 Salvia bowleyana HOM05D003539 ORTHO05D004111 2.4e-55 221.1 160 66.9
BcaC06g35980 Brassica carinata HOM05D003539 ORTHO05D004111 1.2e-54 218.8 255 49.4
BcaB05g23816 Brassica carinata HOM05D003539 ORTHO05D004111 2.4e-52 211.1 316 41.8
Cre03.g207950 Chlamydomonas reinhardtii HOM05D003539 ORTHO05D004111 1.1e-49 202.2 625 28.0
BolC4t27866H Brassica oleracea HOM05D003539 ORTHO05D004111 2.5e-49 201.1 160 61.9
Gohir.A02G119802 Gossypium hirsutum HOM05D003539 ORTHO05D004111 4.3e-49 200.3 156 63.5
PSO782G3432 Papaver somniferum HOM05D003539 ORTHO05D004111 1.6e-48 198.4 310 38.1
RcHm_v2.0_Chr2g0096841 Rosa chinensis HOM05D003539 ORTHO05D004111 1.9e-41 174.9 206 49.5
CBR_g23271 Chara braunii HOM05D003539 ORTHO05D004111 4.6e-35 153.7 353 32.3
PRCOL_00004831 Prasinoderma coloniale HOM05D003539 ORTHO05D004111 1.5e-33 148.7 539 25.4
HanXRQChr05g0145981 Helianthus annuus HOM05D003539 ORTHO05D004111 2.8e-32 144.4 137 56.9
BcaC06g35981 Brassica carinata HOM05D003539 ORTHO05D004111 7.6e-30 136.3 196 41.8
CBR_g23267 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-28 131.7 188 37.2
EL10Ac6g14558 Beta vulgaris HOM05D003539 ORTHO05D004111 2.1e-27 128.3 109 58.7
MCO15G598 Micromonas commoda HOM05D003539 ORTHO05D004111 1.8e-26 125.2 635 24.3
Cfa022324 Carpinus fangiana HOM05D003539 ORTHO05D004111 2.3e-26 124.8 466 27.0
Cfa022001 Carpinus fangiana HOM05D003539 ORTHO05D004111 3.0e-26 124.4 118 57.6
Cpa.g.sc7.212 Carica papaya HOM05D003539 ORTHO05D004111 2.4e-23 114.8 177 41.2
arahy.Tifrunner.gnm1.ann1.PJLZ8M Arachis hypogaea HOM05D003539 ORTHO05D004111 3.1e-23 114.4 102 56.9
C03p59690 Brassica napus HOM05D003539 ORTHO05D004111 1.6e-19 102.1 77 62.3
BolC3t18231H Brassica oleracea HOM05D003539 ORTHO05D004111 1.6e-19 102.1 77 62.3
Cpa.g.sc7.213 Carica papaya HOM05D003539 ORTHO05D004111 6.1e-19 100.1 68 63.2
Potri.007G065101 Populus trichocarpa HOM05D003539 ORTHO05D004111 2.0e-17 95.1 180 40.0
Medtr8g085920 Medicago truncatula HOM05D003539 ORTHO05D004111 3.8e-13 80.9 70 58.6
GSVIVG01026438001 Vitis vinifera HOM05D003539 ORTHO05D004111 4.4e-09 67.4 43 74.4
Medtr4g117730 Medicago truncatula HOM05D003539 ORTHO05D004111 7.4e-09 66.6 58 56.9
RcHm_v2.0_Chr2g0096831 Rosa chinensis HOM05D003539 ORTHO05D004111 7.4e-09 66.6 103 36.9
Psat0s4462g0080 Pisum sativum HOM05D003539 ORTHO05D004111 1.7e-08 65.5 76 51.3
GSVIVG01026437001 Vitis vinifera HOM05D003539 ORTHO05D004111 7.7e-06 56.6 45 57.8


User provided reference genes

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