Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C266G9 Lonicera japonica HOM05D005402 ORTHO05D007036 0.0e+00 1076.2 546 100.0
Dinv13911 Davidia involucrata HOM05D005402 ORTHO05D007036 1.9e-234 815.8 651 66.7
CSS0005702 Camellia sinensis var. sinensis HOM05D005402 ORTHO05D007036 1.3e-227 793.1 653 66.5
Hma1.2p1_0412F.1_g147300 Hydrangea macrophylla HOM05D005402 ORTHO05D007036 1.0e-222 776.9 646 63.2
vmacro15795 Vaccinium macrocarpon HOM05D005402 ORTHO05D007036 6.0e-220 767.7 639 63.7
Cfa000204 Carpinus fangiana HOM05D005402 ORTHO05D007036 3.3e-218 761.9 651 63.3
Haze_06819 Corylus avellana HOM05D005402 ORTHO05D007036 2.1e-217 759.2 651 62.7
GSVIVG01012705001 Vitis vinifera HOM05D005402 ORTHO05D007036 6.3e-217 757.7 644 63.5
HanXRQChr15g0470411 Helianthus annuus HOM05D005402 ORTHO05D007036 5.3e-216 754.6 649 63.0
Lsat_1_v5_gn_7_16460 Lactuca sativa HOM05D005402 ORTHO05D007036 6.1e-212 741.1 646 61.0
Migut.M01334 Erythranthe guttata HOM05D005402 ORTHO05D007036 3.0e-211 738.8 634 60.9
DCAR_028193 Daucus carota HOM05D000001 ORTHO05D007036 1.1e-210 736.9 672 58.9
Prupe.4G224400 Prunus persica HOM05D005402 ORTHO05D007036 1.5e-210 736.5 644 61.5
MSTRG.7199 Avicennia marina HOM05D005402 ORTHO05D007036 2.4e-208 729.2 646 60.5
Sopen02g011290 Solanum pennellii HOM05D005402 ORTHO05D007036 1.2e-207 726.9 651 58.8
Dinv20063 Davidia involucrata HOM05D005402 ORTHO05D007036 3.4e-207 725.3 653 61.1
Solyc02g032920.3 Solanum lycopersicum HOM05D005402 ORTHO05D007036 1.0e-206 723.8 651 58.5
PGSC0003DMG400022060 Solanum tuberosum HOM05D005402 ORTHO05D007036 1.0e-206 723.8 651 58.7
CAN.G128.67 Capsicum annuum HOM05D005402 ORTHO05D007036 1.3e-206 723.4 651 59.1
Thecc.06G223300 Theobroma cacao HOM05D005402 ORTHO05D007036 2.9e-206 722.2 637 59.3
Oeu040335.1 Olea europaea HOM05D005402 ORTHO05D007036 6.5e-206 721.1 638 60.2
FvH4_5g29980 Fragaria vesca HOM05D005402 ORTHO05D007036 1.1e-205 720.3 610 61.8
ClCG01G021860 Citrullus lanatus HOM05D005402 ORTHO05D007036 3.2e-205 718.8 639 59.3
Duzib235G0987 Durio zibethinus HOM05D005402 ORTHO05D007036 7.2e-205 717.6 642 58.4
Atru.chr10.2252 Acer truncatum HOM05D005402 ORTHO05D007036 9.4e-205 717.2 655 58.0
TAR629G0778 Trochodendron aralioides HOM05D005402 ORTHO05D007036 2.7e-204 715.7 646 59.8
Gohir.A05G171400 Gossypium hirsutum HOM05D005402 ORTHO05D007036 7.9e-204 714.1 643 58.3
Gorai.009G179800 Gossypium raimondii HOM05D005402 ORTHO05D007036 7.9e-204 714.1 643 58.2
ECA236G3723 Erigeron canadensis HOM05D005402 ORTHO05D000490 1.4e-203 713.4 642 60.3
Manes.16G005300 Manihot esculenta HOM05D005402 ORTHO05D007036 2.3e-203 712.6 648 58.5
FAN08G3587 Fragaria x ananassa HOM05D005402 ORTHO05D007036 3.9e-203 711.8 640 58.9
Gohir.D05G174500 Gossypium hirsutum HOM05D005402 ORTHO05D007036 1.5e-202 709.9 643 57.7
SalBow8G4792 Salvia bowleyana HOM05D005402 ORTHO05D007036 2.0e-202 709.5 635 59.4
Ciclev10014465m.g Citrus clementina HOM05D005402 ORTHO05D007036 4.4e-202 708.4 644 58.7
RcHm_v2.0_Chr7g0223851 Rosa chinensis HOM05D005402 ORTHO05D007036 5.7e-202 708.0 643 58.6
Glyma.17G012200 Glycine max HOM05D005402 ORTHO05D007036 7.4e-202 707.6 645 58.8
CsaV3_6G048920 Cucumis sativus L. HOM05D005402 ORTHO05D007036 1.3e-201 706.8 639 58.4
Sed0000438 Sechium edule HOM05D005402 ORTHO05D007036 1.3e-201 706.8 646 58.4
MELO3C007401.2 Cucumis melo HOM05D005402 ORTHO05D007036 1.8e-200 703.0 639 57.9
QL05p072729 Quercus lobata HOM05D005402 ORTHO05D007036 1.5e-199 699.9 651 57.8
FAN18G2172 Fragaria x ananassa HOM05D005402 ORTHO05D007036 2.0e-199 699.5 644 57.8
Phvul.003G080200 Phaseolus vulgaris HOM05D005402 ORTHO05D007036 2.0e-199 699.5 651 57.8
VMungo1215G1509 Vigna mungo HOM05D005402 ORTHO05D007036 3.4e-199 698.7 648 57.7
Ca_21074_v3 Cicer arietinum L. HOM05D005402 ORTHO05D007036 1.7e-198 696.4 652 56.4
arahy.Tifrunner.gnm1.ann1.I0ZCH2 Arachis hypogaea HOM05D005402 ORTHO05D007036 2.2e-198 696.0 638 58.3
Nn1g07183 Nelumbo nucifera HOM05D005402 ORTHO05D007036 3.8e-198 695.3 646 58.4
arahy.Tifrunner.gnm1.ann1.T40CTJ Arachis hypogaea HOM05D005402 ORTHO05D007036 2.5e-197 692.6 638 58.2
Nitab4.5_0004712g0050 Nicotiana tabacum HOM05D005402 ORTHO05D007036 2.5e-197 692.6 624 58.8
Potri.007G040000 Populus trichocarpa HOM05D005402 ORTHO05D007036 2.5e-197 692.6 650 57.1
PGR004G0080 Punica granatum HOM05D005402 ORTHO05D007036 2.5e-197 692.6 642 57.2
Hund23456 Selenicereus undatus HOM05D005402 ORTHO05D007036 2.5e-197 692.6 646 56.3
Cc09_g01510 Coffea canephora HOM05D005402 ORTHO05D007036 3.2e-197 692.2 647 57.2
Nitab4.5_0000005g0240 Nicotiana tabacum HOM05D005402 ORTHO05D007036 1.6e-196 689.9 627 59.0
TPR.G36999 Trifolium pratense HOM05D005402 ORTHO05D007036 1.6e-196 689.9 642 56.9
Medtr4g132340 Medicago truncatula HOM05D005402 ORTHO05D007036 4.7e-196 688.3 642 56.5
Sabra07G0036200 Salix brachista HOM05D005402 ORTHO05D007036 7.9e-196 687.6 655 56.5
Glyma.07G261900 Glycine max HOM05D005402 ORTHO05D007036 1.8e-195 686.4 652 57.1
FAN04G1555 Fragaria x ananassa HOM05D005402 ORTHO05D007036 8.8e-195 684.1 644 56.8
PSO541G1465 Papaver somniferum HOM05D005402 ORTHO05D007036 5.7e-194 681.4 654 56.3
FAN13G2175 Fragaria x ananassa HOM05D005402 ORTHO05D007036 7.4e-194 681.0 644 56.8
Eucgr.D01347 Eucalyptus grandis HOM05D005402 ORTHO05D007036 9.7e-194 680.6 639 56.2
PSO675G3880 Papaver somniferum HOM05D005402 ORTHO05D007036 1.7e-193 679.9 654 56.1
Peaxi162Scf00307g01422 Petunia axillaris HOM05D005402 ORTHO05D007036 3.7e-193 678.7 660 56.2
Actinidia11859 Actinidia chinensis HOM05D005402 ORTHO05D007036 4.8e-193 678.3 601 62.1
COL.COLO4_31795 Corchorus olitorius HOM05D005402 ORTHO05D007036 1.2e-191 673.7 643 55.8
Psat4g006080 Pisum sativum HOM05D005402 ORTHO05D007036 2.6e-191 672.5 651 55.1
THA.LOC104806309 Tarenaya hassleriana HOM05D005402 ORTHO05D007036 1.1e-189 667.2 645 55.8
AL7G24400 Arabidopsis lyrata HOM05D005402 ORTHO05D007036 4.2e-189 665.2 656 55.5
MBI02_g15380_MAGBIO Magnolia biondii HOM05D005402 ORTHO05D007036 9.4e-189 664.1 659 54.9
CANSAT56G4097 Cannabis sativa HOM05D005402 ORTHO05D007036 1.2e-188 663.7 645 55.8
Aa31LG6G3970 Aethionema arabicum HOM05D005402 ORTHO05D007036 1.6e-188 663.3 645 55.3
Peaxi162Scf00394g00020 Petunia axillaris HOM05D005402 ORTHO05D007036 2.7e-188 662.5 651 56.2
Sp7g26160 Schrenkiella parvula HOM05D005402 ORTHO05D007036 3.6e-188 662.1 652 54.3
CARHR235910 Cardamine hirsuta HOM05D005402 ORTHO05D007036 1.4e-187 660.2 652 54.8
Carub.0007s1256 Capsella rubella HOM05D005402 ORTHO05D007036 3.0e-187 659.1 653 54.5
C08p10670 Brassica napus HOM05D005402 ORTHO05D007036 2.2e-185 652.9 640 55.2
BcaC07g38316 Brassica carinata HOM05D005402 ORTHO05D007036 6.3e-185 651.4 640 55.2
BolC8t48740H Brassica oleracea HOM05D005402 ORTHO05D007036 6.3e-185 651.4 640 55.2
Lj4g0015196 Lotus japonicus HOM05D005402 ORTHO05D007036 2.0e-183 646.4 647 55.0
AUR62015290 Chenopodium quinoa HOM05D005402 ORTHO05D007036 4.5e-183 645.2 641 52.9
A08p20200 Brassica napus HOM05D005402 ORTHO05D007036 2.9e-182 642.5 645 54.4
BraA08t33979Z Brassica rapa HOM05D005402 ORTHO05D007036 2.9e-182 642.5 645 54.4
Lalb_Chr07g0177141 Lupinus albus HOM05D005402 ORTHO05D007036 2.7e-180 636.0 649 54.1
BcaB03g12558 Brassica carinata HOM05D005402 ORTHO05D007036 8.3e-177 624.4 635 53.9
Ah.10g032740 Amaranthus hybridus HOM05D005402 ORTHO05D007036 1.6e-175 620.2 645 50.5
AUR62032734 Chenopodium quinoa HOM05D005402 ORTHO05D007036 2.2e-174 616.3 652 50.9
Aqoxy1G03121 Aquilegia oxysepala HOM05D005402 ORTHO05D007036 1.2e-172 610.5 644 50.8
TWI63G0339 Tripterygium wilfordii HOM05D005402 ORTHO05D007036 5.2e-171 605.1 642 51.7
AT4G28200 Arabidopsis thaliana HOM05D005402 ORTHO05D007036 6.8e-171 604.7 652 53.1
unitig_748.g7549 Utricularia gibba HOM05D005402 ORTHO05D007036 1.5e-170 603.6 638 52.8
MD15G1066800 Malus domestica HOM05D005402 ORTHO05D007036 4.4e-170 602.1 649 51.8
Thhalv10024642m.g Eutrema salsugineum HOM05D005402 ORTHO05D007036 2.4e-168 596.3 651 50.7
Os02g0103900 Oryza sativa ssp. japonica HOM05D005402 ORTHO05D007036 1.2e-164 583.9 677 47.7
MD08G1079900 Malus domestica HOM05D005402 ORTHO05D007036 5.7e-162 575.1 646 50.2
CDE05G1008 Ceratophyllum demersum HOM05D005402 ORTHO05D007036 1.6e-156 557.0 640 48.3
HPP92_012414 Vanilla planifolia HOM05D005402 ORTHO05D007036 8.3e-153 544.7 646 46.6
ATR0743G102 Amborella trichopoda HOM05D005402 ORTHO05D007036 1.2e-148 530.8 650 46.6
CiPaw.09G093500 Carya illinoinensis HOM05D005402 ORTHO05D007036 4.7e-148 528.9 503 57.9
Hma1.2p1_0412F.1_g147310 Hydrangea macrophylla HOM05D005402 ORTHO05D007036 1.2e-146 524.2 485 58.8
SGA_v2.0_scaffold4G01907 Striga asiatica HOM05D005402 ORTHO05D007036 1.5e-138 497.3 561 50.8
Sc05g0009280 Simmondsia chinensis HOM05D005402 ORTHO05D007036 2.2e-129 466.8 366 65.6
EL10Ac3g06734 Beta vulgaris HOM05D005402 ORTHO05D007036 1.9e-128 463.8 334 68.9
BcaB03g12559 Brassica carinata HOM05D005402 ORTHO05D007036 4.6e-127 459.1 335 69.3
Zm00001eb118290 Zea mays HOM05D005402 ORTHO05D007036 4.2e-112 409.5 512 45.1
SGA_v2.0_scaffold7G03813 Striga asiatica HOM05D005402 ORTHO05D007036 1.7e-105 387.5 474 46.4
Mapoly0165s0012 Marchantia polymorpha HOM05D005402 ORTHO05D007036 3.7e-100 369.8 654 35.2
SMO203G0067 Selaginella moellendorffii HOM05D005402 ORTHO05D007036 1.3e-97 361.3 613 35.1
SEGI_35740 Sequoiadendron giganteum HOM05D005402 ORTHO05D007036 9.4e-88 328.6 330 51.2
Pp3c5_4450 Physcomitrium patens HOM05D005402 ORTHO05D007036 1.4e-83 314.7 643 33.0
Sc05g0009290 Simmondsia chinensis HOM05D005402 ORTHO05D007036 4.8e-76 289.7 219 64.4
AagrBONN_evm.TU.Sc2ySwM_228.882 Anthoceros agrestis HOM05D005402 ORTHO05D007036 6.1e-71 272.7 325 45.8
CBR_g31384 Chara braunii HOM05D005402 ORTHO05D007036 5.9e-66 256.1 737 27.5
Cpa.g.sc1199.5 Carica papaya HOM05D005402 ORTHO05D007036 7.2e-64 249.2 194 60.3
RcHm_v2.0_Chr7g0223961 Rosa chinensis HOM05D005402 ORTHO05D007036 1.4e-59 235.0 190 60.0
EL10Ac3g06733 Beta vulgaris HOM05D005402 ORTHO05D007036 1.4e-46 191.8 351 35.6
Cre10.g442000 Chlamydomonas reinhardtii HOM05D005402 ORTHO05D007036 2.3e-46 191.0 318 36.2
RcHm_v2.0_Chr6g0291751 Rosa chinensis HOM05D005402 ORTHO05D007036 1.1e-35 155.6 171 53.2
CAN.G23.24 Capsicum annuum HOM05D005402 ORTHO05D007036 3.6e-31 140.6 269 35.3
RcHm_v2.0_Chr7g0223941 Rosa chinensis HOM05D005402 ORTHO05D007036 1.1e-30 139.0 81 75.3
RcHm_v2.0_Chr7g0223951 Rosa chinensis HOM05D005402 ORTHO05D007036 4.1e-27 127.1 126 57.9
SalBow7G0548 Salvia bowleyana HOM05D005402 ORTHO05D037500 3.3e-24 117.5 99 59.6
MCO01G148 Micromonas commoda HOM05D005402 ORTHO05D007036 1.2e-23 115.5 209 34.0
SalBow5G5666 Salvia bowleyana HOM05D005402 ORTHO05D037500 4.0e-22 110.5 73 71.2
AagrBONN_evm.TU.Sc2ySwM_228.888 Anthoceros agrestis HOM05D005402 ORTHO05D007036 6.8e-22 109.8 108 46.3
SalBow1G2367 Salvia bowleyana HOM05D005402 ORTHO05D037500 2.0e-21 108.2 73 69.9
Zm00001eb129750 Zea mays HOM05D005402 ORTHO05D007036 7.6e-21 106.3 214 33.2
Cfa022130 Carpinus fangiana HOM05D005402 ORTHO05D007036 1.1e-19 102.4 257 31.5
Hma1.2p1_0660F.1_g197590 Hydrangea macrophylla HOM05D005402 ORTHO05D007036 3.2e-19 100.9 65 69.2
AagrBONN_evm.TU.Sc2ySwM_228.894 Anthoceros agrestis HOM05D005402 ORTHO05D007036 6.0e-18 96.7 85 45.9
CARHR228840 Cardamine hirsuta HOM05D005402 ORTHO05D007036 1.3e-17 95.5 65 73.8
AagrBONN_evm.TU.Sc2ySwM_228.885 Anthoceros agrestis HOM05D005402 ORTHO05D007036 5.1e-17 93.6 154 35.7
Zm00001eb238100 Zea mays HOM05D005402 ORTHO05D007036 2.4e-14 84.7 94 46.8
A01p19620 Brassica napus HOM05D005402 ORTHO05D007036 2.0e-13 81.6 80 56.2
Dinv21729 Davidia involucrata HOM05D005402 ORTHO05D007036 1.7e-09 68.6 72 55.6
RcHm_v2.0_Chr6g0291761 Rosa chinensis HOM05D005402 ORTHO05D007036 8.1e-07 59.7 56 53.6
VMungo1215G1513 Vigna mungo HOM05D005402 ORTHO05D433923 1.8e-06 58.5 41 78.0


User provided reference genes

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