Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 5.9e-141 504.2 257 100.0
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 9.5e-75 284.3 269 59.1
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 3.6e-74 282.3 213 66.7
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 1.4e-73 280.4 251 59.4
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 1.4e-73 280.4 213 65.7
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 1.4e-73 280.4 224 63.8
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 1.8e-73 280.0 206 68.4
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 6.8e-73 278.1 220 64.1
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 8.9e-73 277.7 217 64.5
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 8.9e-73 277.7 211 66.4
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.5e-72 276.9 226 63.7
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 2.0e-72 276.6 231 61.5
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 3.4e-72 275.8 208 65.9
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 4.4e-72 275.4 225 64.0
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 4.4e-72 275.4 246 60.6
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 5.8e-72 275.0 210 66.2
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 7.6e-72 274.6 213 64.3
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 2.9e-71 272.7 217 64.1
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 2.9e-71 272.7 248 57.7
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 2.9e-71 272.7 248 57.7
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 2.9e-71 272.7 244 61.1
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 1.1e-70 270.8 231 59.7
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 4.1e-70 268.9 246 58.5
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 4.1e-70 268.9 247 59.9
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 4.1e-70 268.9 205 65.4
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 4.1e-70 268.9 222 61.7
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 2.1e-69 266.5 240 60.0
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 7.8e-69 264.6 217 63.1
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 1.0e-68 264.2 215 62.3
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 1.3e-68 263.8 250 57.2
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 3.9e-68 262.3 227 59.5
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 5.1e-68 261.9 242 56.6
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 5.1e-68 261.9 207 62.3
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 8.6e-68 261.2 256 56.2
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 8.6e-68 261.2 244 57.8
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 1.1e-67 260.8 208 63.5
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 1.5e-67 260.4 208 63.5
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.5e-67 260.4 281 53.7
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 1.9e-67 260.0 207 61.8
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 2.5e-67 259.6 198 64.1
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 3.3e-67 259.2 212 63.2
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 4.3e-67 258.8 273 52.4
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 9.6e-67 257.7 207 62.8
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 9.6e-67 257.7 216 60.2
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 2.1e-66 256.5 190 66.8
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 2.1e-66 256.5 228 57.5
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 2.8e-66 256.1 266 53.4
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 2.8e-66 256.1 224 62.1
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 4.7e-66 255.4 190 66.8
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 6.2e-66 255.0 190 66.8
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 8.1e-66 254.6 212 59.9
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 1.4e-65 253.8 215 61.4
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 3.1e-65 252.7 259 54.4
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 3.1e-65 252.7 190 65.3
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 3.1e-65 252.7 210 59.0
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 5.2e-65 251.9 258 53.5
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 5.2e-65 251.9 195 65.1
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 1.2e-64 250.8 195 64.6
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 1.5e-64 250.4 258 54.3
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 3.4e-64 249.2 198 61.6
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 1.7e-63 246.9 193 65.8
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 4.9e-63 245.4 233 53.2
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 8.4e-63 244.6 212 58.5
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 3.2e-62 242.7 195 61.5
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 9.3e-62 241.1 179 66.5
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 2.5e-59 233.0 187 61.0
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 4.8e-58 228.8 190 62.6
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 2.4e-57 226.5 246 50.8
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 6.9e-57 224.9 227 56.8
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 2.2e-55 219.9 199 55.3
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 1.1e-54 217.6 265 46.8
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 1.6e-53 213.8 219 56.6
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 8.7e-52 208.0 151 61.6
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 2.5e-51 206.5 194 56.7
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 1.1e-49 201.1 193 52.3
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 2.4e-49 199.9 195 53.3
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 4.0e-49 199.1 124 75.8
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 1.3e-47 194.1 194 52.6
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 2.4e-46 189.9 263 40.7
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 1.5e-40 170.6 121 67.8
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 3.8e-39 166.0 96 74.0
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 7.1e-38 161.8 176 53.4
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 2.1e-37 160.2 193 51.8
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 1.4e-33 147.5 133 60.2
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 2.5e-30 136.7 219 40.2
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 1.2e-29 134.4 198 40.4
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.2e-29 134.4 80 76.2
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 2.4e-25 120.2 78 67.9
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 5.5e-22 109.0 204 36.8
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.0e-19 100.5 144 47.9
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 6.9e-17 92.0 110 51.8
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 9.4e-14 81.6 120 45.0
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 1.4e-12 77.8 106 49.1


User provided reference genes

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