Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 5.0e-282 973.8 495 100.0
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 1.5e-193 679.9 495 72.3
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 1.6e-187 659.8 495 69.5
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 2.0e-185 652.9 502 68.5
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 3.8e-181 638.6 496 67.5
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 4.2e-180 635.2 504 67.1
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 6.8e-178 627.9 493 65.9
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 6.3e-176 621.3 492 65.9
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 8.3e-176 620.9 499 65.3
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 5.4e-175 618.2 494 64.8
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 2.1e-171 606.3 470 68.3
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 3.6e-171 605.5 422 71.6
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 2.3e-170 602.8 497 62.4
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 8.9e-170 600.9 491 64.2
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 1.2e-169 600.5 437 69.1
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 2.4e-167 592.8 494 59.7
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 4.6e-166 588.6 496 62.9
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 1.3e-165 587.0 501 61.3
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 1.7e-165 586.6 497 61.2
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 2.3e-165 586.3 420 67.4
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 8.6e-165 584.3 476 61.3
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 1.1e-164 583.9 567 56.1
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 3.6e-163 578.9 405 70.4
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 8.0e-163 577.8 439 64.5
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 1.1e-162 577.4 497 62.6
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 1.1e-162 577.4 474 61.8
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 1.5e-161 573.5 496 60.7
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 3.4e-161 572.4 498 60.4
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 3.4e-161 572.4 448 66.3
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 2.2e-160 569.7 465 64.1
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 4.9e-160 568.5 486 61.5
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 6.4e-160 568.2 496 59.9
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 8.3e-160 567.8 418 66.3
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 2.4e-159 566.2 494 60.9
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 3.2e-159 565.8 432 63.9
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 4.1e-159 565.5 494 60.9
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 3.5e-158 562.4 495 59.6
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 7.8e-158 561.2 478 60.5
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 1.7e-157 560.1 497 59.0
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 2.3e-157 559.7 493 61.5
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 6.6e-157 558.1 498 59.2
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.9e-156 556.6 494 60.3
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 2.5e-156 556.2 500 58.2
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 1.2e-155 553.9 452 62.2
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 1.2e-155 553.9 414 66.4
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 3.6e-155 552.4 452 61.9
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 1.4e-154 550.4 500 58.2
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 1.8e-154 550.1 484 58.9
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 2.3e-154 549.7 452 61.5
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 8.9e-154 547.7 458 60.5
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 4.4e-153 545.4 495 58.4
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 7.5e-153 544.7 494 60.7
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 8.3e-152 541.2 437 60.6
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 8.3e-152 541.2 460 58.9
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 1.1e-151 540.8 464 60.1
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 9.2e-151 537.7 417 64.0
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 1.2e-150 537.3 454 59.9
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 1.2e-150 537.3 465 60.9
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 1.6e-150 537.0 486 57.8
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 2.1e-150 536.6 431 62.4
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 2.1e-150 536.6 446 60.8
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 3.5e-150 535.8 492 58.5
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 6.0e-150 535.0 507 56.4
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 1.7e-149 533.5 429 63.4
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 3.9e-149 532.3 458 60.3
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 8.6e-149 531.2 421 61.5
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 1.1e-148 530.8 447 60.0
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 4.3e-148 528.9 463 59.0
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 7.3e-148 528.1 424 60.4
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 1.2e-147 527.3 445 59.6
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.6e-147 526.9 422 60.7
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 2.8e-147 526.2 520 55.0
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 8.1e-147 524.6 483 57.6
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 2.0e-145 520.0 495 54.3
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 2.6e-145 519.6 481 55.5
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 5.8e-145 518.5 452 58.0
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.7e-144 516.9 422 59.5
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 8.4e-144 514.6 494 55.1
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 3.2e-143 512.7 479 56.6
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 2.1e-142 510.0 369 67.5
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 4.6e-142 508.8 449 57.0
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 1.1e-140 504.2 451 58.8
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 1.9e-140 503.4 373 65.4
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 2.1e-139 500.0 393 61.8
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 2.1e-139 500.0 443 59.6
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 8.4e-136 488.0 511 52.3
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 1.2e-134 484.2 499 52.1
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 1.2e-134 484.2 420 57.1
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 2.7e-134 483.0 395 60.3
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 9.6e-132 474.6 430 57.7
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 2.8e-131 473.0 419 56.8
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 2.4e-127 459.9 368 58.2
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 1.3e-123 447.6 404 61.6
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 1.8e-122 443.7 366 57.1
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.6e-118 430.6 441 50.8
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 2.4e-114 416.8 284 73.6
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.1e-106 389.8 426 49.8
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 5.5e-103 379.0 420 49.8
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 3.8e-96 356.3 435 41.8
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 3.2e-95 353.2 482 41.9
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 5.7e-92 342.4 221 74.2
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 1.4e-87 327.8 400 44.0
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 1.6e-86 324.3 447 41.2
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 4.7e-86 322.8 300 54.0
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 3.8e-80 303.1 407 44.5
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 1.4e-74 284.6 258 57.4
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 4.4e-68 263.1 258 54.7
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 1.0e-61 241.9 290 48.6
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 1.2e-54 218.4 457 35.0
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.5e-52 211.5 222 49.5
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 1.3e-43 181.8 173 60.7
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 1.3e-43 181.8 437 31.1
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 2.9e-35 154.1 113 65.5
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 3.0e-32 144.1 181 50.8
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 5.1e-32 143.3 115 58.3
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.1e-30 137.9 116 59.5
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.1e-29 135.6 93 68.8
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 3.5e-25 120.6 87 66.7
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 8.7e-24 115.9 411 27.0
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 1.8e-21 108.2 140 49.3
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 6.0e-17 93.2 90 47.8
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 1.5e-15 88.6 74 59.5
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 5.3e-13 80.1 74 62.2
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.4e-10 71.2 51 62.7
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 1.2e-09 68.9 69 50.7
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 1.5e-07 62.0 121 40.5


User provided reference genes

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