Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C0T9 Lonicera japonica HOM05D005554 ORTHO05D007823 3.7e-163 578.2 297 100.0
Lj2C185T6 Lonicera japonica HOM05D005554 ORTHO05D007823 1.5e-143 513.1 270 99.6
Hma1.2p1_0377F.1_g139310 Hydrangea macrophylla HOM05D005554 ORTHO05D007823 3.4e-100 369.0 273 73.6
Dinv38934 Davidia involucrata HOM05D005554 ORTHO05D007823 4.6e-97 358.6 281 73.3
Nn6g33413 Nelumbo nucifera HOM05D005554 ORTHO05D007823 3.3e-95 352.4 277 70.0
TAR375G0921 Trochodendron aralioides HOM05D005554 ORTHO05D007823 5.6e-95 351.7 279 70.6
CSS0044545 Camellia sinensis var. sinensis HOM05D005554 ORTHO05D007823 1.6e-94 350.1 283 68.9
Nitab4.5_0001615g0110 Nicotiana tabacum HOM05D005554 ORTHO05D007823 4.5e-92 342.0 275 69.1
Peaxi162Scf00119g01015 Petunia axillaris HOM05D005554 ORTHO05D007823 1.4e-90 337.0 278 68.0
Aqoxy7G00299 Aquilegia oxysepala HOM05D005554 ORTHO05D007823 1.9e-90 336.7 269 68.4
ClCG01G002630 Citrullus lanatus HOM05D005554 ORTHO05D007823 3.2e-90 335.9 280 67.1
Actinidia14567 Actinidia chinensis HOM05D005554 ORTHO05D007823 1.2e-89 334.0 272 67.6
PSO478G3044 Papaver somniferum HOM05D005554 ORTHO05D007823 2.1e-89 333.2 271 68.6
Cc08_g14820 Coffea canephora HOM05D005554 ORTHO05D007823 2.7e-89 332.8 280 65.4
Sed0016596 Sechium edule HOM05D005554 ORTHO05D007823 7.9e-89 331.3 281 67.3
PSO782G1990 Papaver somniferum HOM05D005554 ORTHO05D007823 1.8e-88 330.1 271 68.3
Nitab4.5_0010813g0010 Nicotiana tabacum HOM05D005554 ORTHO05D007823 8.7e-88 327.8 275 66.5
PGSC0003DMG402012338 Solanum tuberosum HOM05D005554 ORTHO05D007823 3.3e-87 325.9 277 66.4
Lalb_Chr05g0224711 Lupinus albus HOM05D005554 ORTHO05D007823 4.3e-87 325.5 277 67.5
Sopen08g029470 Solanum pennellii HOM05D005554 ORTHO05D007823 4.3e-87 325.5 277 66.8
Oeu064085.1 Olea europaea HOM05D005554 ORTHO05D007823 5.6e-87 325.1 280 64.3
DCAR_000617 Daucus carota HOM05D005554 ORTHO05D007823 9.6e-87 324.3 275 65.5
Solyc08g081170.4 Solanum lycopersicum HOM05D005554 ORTHO05D007823 9.6e-87 324.3 277 66.4
Eucgr.D01840 Eucalyptus grandis HOM05D005554 ORTHO05D007823 2.1e-86 323.2 279 64.2
CANSAT21G2493 Cannabis sativa HOM05D005554 ORTHO05D007823 6.2e-86 321.6 276 66.3
PGR031G2745 Punica granatum HOM05D005554 ORTHO05D007823 4.0e-85 318.9 281 66.9
MD06G1085100 Malus domestica HOM05D005554 ORTHO05D007823 9.0e-85 317.8 278 64.0
Prupe.5G101100 Prunus persica HOM05D005554 ORTHO05D007823 1.2e-84 317.4 278 64.4
Hund14815 Selenicereus undatus HOM05D005554 ORTHO05D007823 2.0e-84 316.6 277 63.5
TPR.G12960 Trifolium pratense HOM05D005554 ORTHO05D007823 1.3e-83 313.9 269 62.5
AUR62003173 Chenopodium quinoa HOM05D005554 ORTHO05D007823 2.9e-83 312.8 279 63.8
CsaV3_5G002730 Cucumis sativus L. HOM05D005554 ORTHO05D007823 2.9e-83 312.8 284 63.0
RcHm_v2.0_Chr7g0197491 Rosa chinensis HOM05D005554 ORTHO05D007823 3.8e-83 312.4 278 64.0
SalBow1G4020 Salvia bowleyana HOM05D005554 ORTHO05D007823 3.8e-83 312.4 274 63.5
Migut.E01089 Erythranthe guttata HOM05D005554 ORTHO05D007823 8.4e-83 311.2 273 63.7
vmacro11364 Vaccinium macrocarpon HOM05D005554 ORTHO05D007823 8.4e-83 311.2 286 60.8
Ca_17525_v3 Cicer arietinum L. HOM05D005554 ORTHO05D007823 1.9e-82 310.1 270 63.3
COL.COLO4_34475 Corchorus olitorius HOM05D005554 ORTHO05D007823 2.5e-82 309.7 289 62.3
CAN.G774.53 Capsicum annuum HOM05D005554 ORTHO05D007823 7.1e-82 308.1 278 64.7
FvH4_5g02610 Fragaria vesca HOM05D005554 ORTHO05D007823 1.2e-81 307.4 275 64.7
FAN18G3000 Fragaria x ananassa HOM05D005554 ORTHO05D007823 1.2e-81 307.4 275 64.7
MSTRG.13839 Avicennia marina HOM05D005554 ORTHO05D007823 1.6e-81 307.0 280 61.1
Glyma.05G208600 Glycine max HOM05D005554 ORTHO05D007823 2.7e-81 306.2 268 64.6
Glyma.05G208921 Glycine max HOM05D005554 ORTHO05D007823 2.7e-81 306.2 268 64.6
FAN08G3292 Fragaria x ananassa HOM05D005554 ORTHO05D007823 3.5e-81 305.8 275 63.6
QL12p032791 Quercus lobata HOM05D005554 ORTHO05D007823 4.6e-81 305.4 288 61.5
FAN13G2706 Fragaria x ananassa HOM05D005554 ORTHO05D007823 1.3e-80 303.9 275 62.9
Medtr8g098345 Medicago truncatula HOM05D005554 ORTHO05D007823 2.3e-80 303.1 269 61.3
FAN04G0002 Fragaria x ananassa HOM05D005554 ORTHO05D007823 3.9e-80 302.4 275 62.9
VMungo0251G0638 Vigna mungo HOM05D005554 ORTHO05D007823 3.9e-80 302.4 268 63.1
Atru.chr9.2175 Acer truncatum HOM05D005554 ORTHO05D007823 6.7e-80 301.6 286 59.1
Ciclev10018956m.g Citrus clementina HOM05D005554 ORTHO05D007823 1.1e-79 300.8 287 58.9
Glyma.08G015200 Glycine max HOM05D005554 ORTHO05D007823 1.1e-79 300.8 268 64.2
Psat7g032760 Pisum sativum HOM05D005554 ORTHO05D007823 1.1e-79 300.8 269 60.2
Gohir.D12G231000 Gossypium hirsutum HOM05D005554 ORTHO05D007823 2.5e-79 299.7 290 60.0
Gorai.008G247200 Gossypium raimondii HOM05D005554 ORTHO05D007823 2.5e-79 299.7 290 60.0
Ah.10g034840 Amaranthus hybridus HOM05D005554 ORTHO05D007823 4.3e-79 298.9 296 58.4
Lj4g0004686 Lotus japonicus HOM05D005554 ORTHO05D007823 4.3e-79 298.9 275 63.3
Thecc.03G279900 Theobroma cacao HOM05D005554 ORTHO05D007823 5.6e-79 298.5 290 59.3
Cfa012222 Carpinus fangiana HOM05D005554 ORTHO05D007823 9.6e-79 297.7 278 62.6
arahy.Tifrunner.gnm1.ann1.C4WXPV Arachis hypogaea HOM05D005554 ORTHO05D007823 1.3e-78 297.4 276 61.6
arahy.Tifrunner.gnm1.ann1.CVD0A8 Arachis hypogaea HOM05D005554 ORTHO05D007823 1.3e-78 297.4 276 61.6
Gohir.A12G229900 Gossypium hirsutum HOM05D005554 ORTHO05D007823 2.1e-78 296.6 291 59.1
CiPaw.12G092300 Carya illinoinensis HOM05D005554 ORTHO05D007823 2.8e-78 296.2 277 62.1
MELO3C005683.2 Cucumis melo HOM05D005554 ORTHO05D007823 2.8e-78 296.2 284 61.3
Lsat_1_v5_gn_3_6620 Lactuca sativa HOM05D005554 ORTHO05D007823 2.8e-78 296.2 276 62.3
EL10Ac6g14928 Beta vulgaris HOM05D005554 ORTHO05D007823 3.7e-78 295.8 287 59.9
Phvul.002G290300 Phaseolus vulgaris HOM05D005554 ORTHO05D007823 3.7e-78 295.8 268 62.3
Sc01g0009640 Simmondsia chinensis HOM05D005554 ORTHO05D007823 6.2e-78 295.0 278 60.4
Haze_08788 Corylus avellana HOM05D005554 ORTHO05D007823 1.8e-77 293.5 278 61.9
Duzib205G0518 Durio zibethinus HOM05D005554 ORTHO05D007823 3.1e-77 292.7 291 58.4
HanXRQChr06g0165871 Helianthus annuus HOM05D005554 ORTHO05D007823 2.0e-76 290.0 276 60.5
unitig_26.g9706 Utricularia gibba HOM05D005554 ORTHO05D007823 3.8e-75 285.8 274 58.8
THA.LOC104823588 Tarenaya hassleriana HOM05D005554 ORTHO05D007823 1.9e-74 283.5 297 55.6
Cpa.g.sc74.56 Carica papaya HOM05D005554 ORTHO05D007823 3.2e-74 282.7 281 59.8
TWI15G0555 Tripterygium wilfordii HOM05D005554 ORTHO05D007823 5.5e-74 282.0 289 58.1
Potri.001G103300 Populus trichocarpa HOM05D005554 ORTHO05D007823 1.2e-73 280.8 280 59.6
AUR62007990 Chenopodium quinoa HOM05D005554 ORTHO05D007823 2.1e-73 280.0 263 61.6
SGA_v2.0_scaffold144G35937 Striga asiatica HOM05D005554 ORTHO05D007823 7.9e-73 278.1 269 59.5
Sabra01G0078000 Salix brachista HOM05D005554 ORTHO05D007823 1.8e-72 276.9 278 58.6
Manes.02G019800 Manihot esculenta HOM05D005554 ORTHO05D007823 1.1e-71 274.2 280 57.1
MBI18_g45367_MAGBIO Magnolia biondii HOM05D005554 ORTHO05D007823 1.9e-71 273.5 222 68.0
ATR0680G162 Amborella trichopoda HOM05D005554 ORTHO05D007823 4.3e-71 272.3 274 57.7
ECA246G2370 Erigeron canadensis HOM05D005554 ORTHO05D007823 4.3e-71 272.3 281 58.7
Aa31LG2G890 Aethionema arabicum HOM05D005554 ORTHO05D007823 6.3e-70 268.5 286 55.2
BraA09t37033Z Brassica rapa HOM05D005554 ORTHO05D007823 7.7e-68 261.5 282 55.7
Sp2g00970 Schrenkiella parvula HOM05D005554 ORTHO05D007823 1.0e-67 261.2 284 54.6
A09p13810 Brassica napus HOM05D005554 ORTHO05D007823 1.7e-67 260.4 282 55.3
BcaC04g22690 Brassica carinata HOM05D005554 ORTHO05D007823 3.8e-67 259.2 282 55.0
C09p16520 Brassica napus HOM05D005554 ORTHO05D007823 3.8e-67 259.2 282 55.0
BolC9t54561H Brassica oleracea HOM05D005554 ORTHO05D007823 6.5e-67 258.5 282 54.6
Thhalv10023292m.g Eutrema salsugineum HOM05D005554 ORTHO05D007823 3.2e-66 256.1 284 54.2
BcaB07g31556 Brassica carinata HOM05D005554 ORTHO05D007823 9.4e-66 254.6 294 53.7
Carub.0002s0117 Capsella rubella HOM05D005554 ORTHO05D007823 1.2e-65 254.2 295 53.6
CARHR047660 Cardamine hirsuta HOM05D005554 ORTHO05D007823 1.6e-65 253.8 284 53.9
AT1G63680 Arabidopsis thaliana HOM05D005554 ORTHO05D007823 2.1e-65 253.4 288 53.5
AL2G11550 Arabidopsis lyrata HOM05D005554 ORTHO05D007823 1.4e-64 250.8 285 54.4
CDE05G1777 Ceratophyllum demersum HOM05D005554 ORTHO05D007823 9.4e-58 228.0 268 53.0
Gohir.A03G016800 Gossypium hirsutum HOM05D005554 ORTHO05D007823 7.2e-42 175.3 137 62.0
Gorai.003G158300 Gossypium raimondii HOM05D005554 ORTHO05D007823 2.1e-41 173.7 137 62.8
Os10g0548900 Oryza sativa ssp. japonica HOM05D005554 ORTHO05D007823 1.3e-38 164.5 281 39.1
HPP92_008493 Vanilla planifolia HOM05D005554 ORTHO05D007823 6.3e-38 162.2 122 63.9
Pp3c24_18820 Physcomitrium patens HOM05D005554 ORTHO05D007823 1.9e-34 150.6 270 40.0
Zm00001eb391750 Zea mays HOM05D005554 ORTHO05D007823 1.9e-34 150.6 276 38.0
Mapoly0091s0082 Marchantia polymorpha HOM05D005554 ORTHO05D007823 9.4e-34 148.3 304 35.9
BcaB04g18522 Brassica carinata HOM05D005554 ORTHO05D021652 3.7e-30 136.3 100 68.0
Oeu007749.1 Olea europaea HOM05D005554 ORTHO05D007823 4.1e-29 132.9 183 47.5
AagrBONN_evm.TU.Sc2ySwM_228.1600 Anthoceros agrestis HOM05D005554 ORTHO05D007823 1.2e-28 131.3 273 37.4
BcaC06g33105 Brassica carinata HOM05D005554 ORTHO05D021652 2.0e-28 130.6 123 56.9
HPP92_014728 Vanilla planifolia HOM05D005554 ORTHO05D007823 3.8e-27 126.3 107 53.3
SMO147G0132 Selaginella moellendorffii HOM05D005554 ORTHO05D007823 8.6e-27 125.2 101 58.4
Pp3c23_15810 Physcomitrium patens HOM05D005554 ORTHO05D007823 5.7e-23 112.5 111 48.6
MD14G1106100 Malus domestica HOM05D005554 ORTHO05D026402 2.4e-21 107.1 122 52.5
CBR_g32224 Chara braunii HOM05D005554 ORTHO05D007823 3.2e-21 106.7 152 44.1
BcaB06g26524 Brassica carinata HOM05D005554 ORTHO05D021652 2.9e-14 83.6 54 72.2
Actinidia02001 Actinidia chinensis HOM05D005554 ORTHO05D026402 2.7e-12 77.0 85 50.6
BcaB07g30213 Brassica carinata HOM05D005554 ORTHO05D021652 2.7e-12 77.0 74 56.8
HPP92_008492 Vanilla planifolia HOM05D005554 ORTHO05D026402 1.0e-11 75.1 103 48.5
PRCOL_00002248 Prasinoderma coloniale HOM05D005554 ORTHO05D007823 5.0e-11 72.8 111 34.2
MCO12G378 Micromonas commoda HOM05D005554 ORTHO05D007823 3.3e-10 70.1 81 46.9
Actinidia37487 Actinidia chinensis HOM05D005554 ORTHO05D058019 1.3e-06 58.2 70 52.9


User provided reference genes

Program Settings