Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C0T8 Lonicera japonica HOM05D005554 ORTHO05D007823 1.1e-187 659.8 326 100.0
Lj2C185T6 Lonicera japonica HOM05D005554 ORTHO05D007823 2.4e-176 622.1 402 81.1
Peaxi162Scf00119g01015 Petunia axillaris HOM05D005554 ORTHO05D007823 4.8e-156 554.7 343 80.5
Nn6g33413 Nelumbo nucifera HOM05D005554 ORTHO05D007823 4.1e-155 551.6 343 80.5
Oeu064085.1 Olea europaea HOM05D005554 ORTHO05D007823 4.1e-155 551.6 343 81.3
CAN.G774.53 Capsicum annuum HOM05D005554 ORTHO05D007823 6.9e-155 550.8 343 80.2
COL.COLO4_34475 Corchorus olitorius HOM05D005554 ORTHO05D007823 9.1e-155 550.4 343 80.5
SalBow1G4020 Salvia bowleyana HOM05D005554 ORTHO05D007823 1.2e-154 550.1 343 80.2
Atru.chr9.2175 Acer truncatum HOM05D005554 ORTHO05D007823 1.5e-154 549.7 343 80.2
QL12p032791 Quercus lobata HOM05D005554 ORTHO05D007823 2.0e-154 549.3 343 79.9
Gohir.A12G229900 Gossypium hirsutum HOM05D005554 ORTHO05D007823 2.6e-154 548.9 343 79.6
Cpa.g.sc74.56 Carica papaya HOM05D005554 ORTHO05D007823 4.5e-154 548.1 343 80.5
Dinv38934 Davidia involucrata HOM05D005554 ORTHO05D007823 4.5e-154 548.1 343 79.9
Gohir.D12G231000 Gossypium hirsutum HOM05D005554 ORTHO05D007823 4.5e-154 548.1 343 79.6
Cc08_g14820 Coffea canephora HOM05D005554 ORTHO05D007823 5.9e-154 547.7 343 79.0
Nitab4.5_0001615g0110 Nicotiana tabacum HOM05D005554 ORTHO05D007823 1.3e-153 546.6 351 77.8
Actinidia14567 Actinidia chinensis HOM05D005554 ORTHO05D007823 1.7e-153 546.2 343 79.3
CiPaw.12G092300 Carya illinoinensis HOM05D005554 ORTHO05D007823 3.8e-153 545.0 343 79.0
Ciclev10018956m.g Citrus clementina HOM05D005554 ORTHO05D007823 5.0e-153 544.7 343 80.2
CSS0044545 Camellia sinensis var. sinensis HOM05D005554 ORTHO05D007823 6.5e-153 544.3 343 79.3
Thecc.03G279900 Theobroma cacao HOM05D005554 ORTHO05D007823 8.5e-153 543.9 343 79.9
Potri.001G103300 Populus trichocarpa HOM05D005554 ORTHO05D007823 1.4e-152 543.1 343 78.7
Prupe.5G101100 Prunus persica HOM05D005554 ORTHO05D007823 3.2e-152 542.0 343 79.3
Duzib205G0518 Durio zibethinus HOM05D005554 ORTHO05D007823 5.5e-152 541.2 343 79.3
PGSC0003DMG402012338 Solanum tuberosum HOM05D005554 ORTHO05D007823 5.5e-152 541.2 343 78.1
Haze_08788 Corylus avellana HOM05D005554 ORTHO05D007823 9.4e-152 540.4 317 83.6
Gorai.008G247200 Gossypium raimondii HOM05D005554 ORTHO05D007823 9.4e-152 540.4 343 79.0
TAR375G0921 Trochodendron aralioides HOM05D005554 ORTHO05D007823 9.4e-152 540.4 343 78.7
TWI15G0555 Tripterygium wilfordii HOM05D005554 ORTHO05D007823 1.2e-151 540.0 343 78.4
Aqoxy7G00299 Aquilegia oxysepala HOM05D005554 ORTHO05D007823 2.1e-151 539.3 343 79.0
Solyc08g081170.4 Solanum lycopersicum HOM05D005554 ORTHO05D007823 2.1e-151 539.3 343 78.1
Sopen08g029470 Solanum pennellii HOM05D005554 ORTHO05D007823 2.1e-151 539.3 343 78.1
PGR031G2745 Punica granatum HOM05D005554 ORTHO05D007823 4.6e-151 538.1 343 79.3
CANSAT21G2493 Cannabis sativa HOM05D005554 ORTHO05D007823 6.1e-151 537.7 343 79.9
MD06G1085100 Malus domestica HOM05D005554 ORTHO05D007823 1.0e-150 537.0 343 78.7
Manes.02G019800 Manihot esculenta HOM05D005554 ORTHO05D007823 2.3e-150 535.8 343 78.1
PSO478G3044 Papaver somniferum HOM05D005554 ORTHO05D007823 5.1e-150 534.6 343 78.1
PSO782G1990 Papaver somniferum HOM05D005554 ORTHO05D007823 6.7e-150 534.3 343 77.8
Migut.E01089 Erythranthe guttata HOM05D005554 ORTHO05D007823 8.8e-150 533.9 343 77.8
DCAR_000617 Daucus carota HOM05D005554 ORTHO05D007823 1.1e-149 533.5 343 79.0
Nitab4.5_0010813g0010 Nicotiana tabacum HOM05D005554 ORTHO05D007823 1.5e-149 533.1 396 69.4
RcHm_v2.0_Chr7g0197491 Rosa chinensis HOM05D005554 ORTHO05D007823 1.5e-149 533.1 343 78.1
FAN04G0002 Fragaria x ananassa HOM05D005554 ORTHO05D007823 3.3e-149 531.9 343 77.6
FAN13G2706 Fragaria x ananassa HOM05D005554 ORTHO05D007823 3.3e-149 531.9 343 77.6
Hma1.2p1_0377F.1_g139310 Hydrangea macrophylla HOM05D005554 ORTHO05D007823 5.7e-149 531.2 365 74.0
MBI18_g45367_MAGBIO Magnolia biondii HOM05D005554 ORTHO05D007823 9.7e-149 530.4 343 78.7
FAN18G3000 Fragaria x ananassa HOM05D005554 ORTHO05D007823 1.7e-148 529.6 343 77.6
FAN08G3292 Fragaria x ananassa HOM05D005554 ORTHO05D007823 1.1e-147 526.9 343 77.0
Eucgr.D01840 Eucalyptus grandis HOM05D005554 ORTHO05D007823 2.4e-147 525.8 343 77.6
CsaV3_5G002730 Cucumis sativus L. HOM05D005554 ORTHO05D007823 4.1e-147 525.0 343 76.4
Sabra01G0078000 Salix brachista HOM05D005554 ORTHO05D007823 4.1e-147 525.0 382 70.9
THA.LOC104823588 Tarenaya hassleriana HOM05D005554 ORTHO05D007823 4.1e-147 525.0 343 77.0
MSTRG.13839 Avicennia marina HOM05D005554 ORTHO05D007823 1.2e-146 523.5 343 77.0
ATR0680G162 Amborella trichopoda HOM05D005554 ORTHO05D007823 1.5e-146 523.1 343 76.7
MELO3C005683.2 Cucumis melo HOM05D005554 ORTHO05D007823 2.0e-146 522.7 343 76.4
Sc01g0009640 Simmondsia chinensis HOM05D005554 ORTHO05D007823 1.0e-145 520.4 343 76.7
Ah.10g034840 Amaranthus hybridus HOM05D005554 ORTHO05D007823 1.3e-145 520.0 343 77.0
AUR62003173 Chenopodium quinoa HOM05D005554 ORTHO05D007823 6.5e-145 517.7 343 76.1
CDE05G1777 Ceratophyllum demersum HOM05D005554 ORTHO05D007823 1.2e-143 513.5 343 74.6
AT1G63680 Arabidopsis thaliana HOM05D005554 ORTHO05D007823 7.9e-143 510.8 343 74.1
BcaB07g31556 Brassica carinata HOM05D005554 ORTHO05D007823 7.9e-143 510.8 343 74.3
Sp2g00970 Schrenkiella parvula HOM05D005554 ORTHO05D007823 1.0e-142 510.4 343 74.3
BcaC04g22690 Brassica carinata HOM05D005554 ORTHO05D007823 2.3e-142 509.2 343 74.1
C09p16520 Brassica napus HOM05D005554 ORTHO05D007823 2.3e-142 509.2 343 74.1
BolC9t54561H Brassica oleracea HOM05D005554 ORTHO05D007823 2.3e-142 509.2 343 74.1
A09p13810 Brassica napus HOM05D005554 ORTHO05D007823 6.7e-142 507.7 343 74.1
BraA09t37033Z Brassica rapa HOM05D005554 ORTHO05D007823 8.8e-142 507.3 343 74.1
Carub.0002s0117 Capsella rubella HOM05D005554 ORTHO05D007823 8.8e-142 507.3 343 73.5
AUR62007990 Chenopodium quinoa HOM05D005554 ORTHO05D007823 2.0e-141 506.1 343 74.3
AL2G11550 Arabidopsis lyrata HOM05D005554 ORTHO05D007823 2.6e-141 505.8 343 73.5
Thhalv10023292m.g Eutrema salsugineum HOM05D005554 ORTHO05D007823 3.3e-141 505.4 343 74.1
Medtr8g098345 Medicago truncatula HOM05D005554 ORTHO05D007823 3.3e-141 505.4 363 72.5
Lalb_Chr05g0224711 Lupinus albus HOM05D005554 ORTHO05D007823 1.7e-140 503.1 343 75.2
EL10Ac6g14928 Beta vulgaris HOM05D005554 ORTHO05D007823 2.2e-140 502.7 343 74.3
Glyma.05G208600 Glycine max HOM05D005554 ORTHO05D007823 3.7e-140 501.9 343 74.9
Glyma.05G208921 Glycine max HOM05D005554 ORTHO05D007823 3.7e-140 501.9 343 74.9
arahy.Tifrunner.gnm1.ann1.CVD0A8 Arachis hypogaea HOM05D005554 ORTHO05D007823 6.3e-140 501.1 343 75.2
arahy.Tifrunner.gnm1.ann1.C4WXPV Arachis hypogaea HOM05D005554 ORTHO05D007823 1.4e-139 500.0 343 74.9
Glyma.08G015200 Glycine max HOM05D005554 ORTHO05D007823 3.1e-139 498.8 343 74.9
CARHR047660 Cardamine hirsuta HOM05D005554 ORTHO05D007823 4.1e-139 498.4 343 73.2
Aa31LG2G890 Aethionema arabicum HOM05D005554 ORTHO05D007823 7.0e-139 497.7 343 72.9
ECA246G2370 Erigeron canadensis HOM05D005554 ORTHO05D007823 1.6e-138 496.5 343 72.6
Ca_17525_v3 Cicer arietinum L. HOM05D005554 ORTHO05D007823 2.0e-138 496.1 342 74.3
Hund14815 Selenicereus undatus HOM05D005554 ORTHO05D007823 2.6e-138 495.7 343 72.3
VMungo0251G0638 Vigna mungo HOM05D005554 ORTHO05D007823 1.3e-137 493.4 343 73.8
Lj4g0004686 Lotus japonicus HOM05D005554 ORTHO05D007823 2.2e-137 492.7 342 73.7
Phvul.002G290300 Phaseolus vulgaris HOM05D005554 ORTHO05D007823 1.9e-136 489.6 343 73.2
Psat7g032760 Pisum sativum HOM05D005554 ORTHO05D007823 3.2e-136 488.8 342 72.8
vmacro11364 Vaccinium macrocarpon HOM05D005554 ORTHO05D007823 2.1e-135 486.1 399 64.4
TPR.G12960 Trifolium pratense HOM05D005554 ORTHO05D007823 3.6e-135 485.3 342 72.5
unitig_26.g9706 Utricularia gibba HOM05D005554 ORTHO05D007823 1.7e-132 476.5 343 72.0
AagrBONN_evm.TU.Sc2ySwM_228.1600 Anthoceros agrestis HOM05D005554 ORTHO05D007823 2.2e-132 476.1 343 68.5
HanXRQChr06g0165871 Helianthus annuus HOM05D005554 ORTHO05D007823 8.2e-132 474.2 343 70.0
Gohir.A03G016800 Gossypium hirsutum HOM05D005554 ORTHO05D007823 2.4e-131 472.6 340 70.6
Lsat_1_v5_gn_3_6620 Lactuca sativa HOM05D005554 ORTHO05D007823 7.0e-131 471.1 357 68.3
Gohir.D03G151100 Gossypium hirsutum HOM05D005554 ORTHO05D007823 2.0e-130 469.5 340 70.0
Mapoly0091s0082 Marchantia polymorpha HOM05D005554 ORTHO05D007823 5.9e-130 468.0 343 67.9
Gorai.003G158300 Gossypium raimondii HOM05D005554 ORTHO05D007823 7.7e-130 467.6 340 69.4
GSVIVG01019746001 Vitis vinifera HOM05D005554 ORTHO05D007823 6.5e-129 464.5 303 77.9
CBR_g32224 Chara braunii HOM05D005554 ORTHO05D007823 6.1e-127 458.0 343 64.7
FvH4_5g02610 Fragaria vesca HOM05D005554 ORTHO05D007823 1.0e-126 457.2 300 77.0
Pp3c24_18820 Physcomitrium patens HOM05D005554 ORTHO05D007823 2.3e-126 456.1 343 65.9
ClCG01G002630 Citrullus lanatus HOM05D005554 ORTHO05D007823 2.6e-125 452.6 300 75.7
SGA_v2.0_scaffold144G35937 Striga asiatica HOM05D005554 ORTHO05D007823 6.3e-124 448.0 318 71.4
Os10g0548900 Oryza sativa ssp. japonica HOM05D005554 ORTHO05D007823 5.4e-123 444.9 344 65.7
HPP92_014728 Vanilla planifolia HOM05D005554 ORTHO05D007823 5.4e-123 444.9 343 63.3
Zm00001eb391750 Zea mays HOM05D005554 ORTHO05D007823 2.0e-122 443.0 344 66.3
SMO147G0132 Selaginella moellendorffii HOM05D005554 ORTHO05D007823 3.8e-121 438.7 343 63.8
Sed0016596 Sechium edule HOM05D005554 ORTHO05D007823 4.7e-119 431.8 293 74.4
HPP92_020853 Vanilla planifolia HOM05D005554 ORTHO05D007823 5.9e-114 414.8 351 59.0
Pp3c23_15810 Physcomitrium patens HOM05D005554 ORTHO05D007823 2.9e-113 412.5 330 62.7
Cfa012222 Carpinus fangiana HOM05D005554 ORTHO05D007823 6.8e-102 374.8 201 91.0
HPP92_008494 Vanilla planifolia HOM05D005554 ORTHO05D007823 2.8e-95 352.8 258 69.4
Oeu007749.1 Olea europaea HOM05D005554 ORTHO05D007823 2.0e-69 266.9 210 68.1
CAN.G20.10 Capsicum annuum HOM05D005554 ORTHO05D007823 2.6e-69 266.5 166 80.1
MCO12G378 Micromonas commoda HOM05D005554 ORTHO05D007823 3.5e-50 203.0 311 40.8
PRCOL_00002248 Prasinoderma coloniale HOM05D005554 ORTHO05D007823 2.2e-44 183.7 478 31.4
Actinidia02000 Actinidia chinensis HOM05D005554 ORTHO05D007823 5.0e-44 182.6 163 60.7
CSS0006848 Camellia sinensis var. sinensis HOM05D005554 ORTHO05D007823 4.5e-37 159.5 83 86.7
Cre12.g519900 Chlamydomonas reinhardtii HOM05D005554 ORTHO05D007823 6.1e-34 149.1 367 30.8
SEGI_34096 Sequoiadendron giganteum HOM05D005554 ORTHO05D007823 1.7e-23 114.4 67 77.6
MD14G1106300 Malus domestica HOM05D005554 ORTHO05D007823 4.5e-21 106.3 54 87.0
Sabra03G0091300 Salix brachista HOM05D008679 ORTHO05D010804 5.7e-16 89.4 120 43.3
HPP92_008493 Vanilla planifolia HOM05D005554 ORTHO05D007823 2.8e-15 87.0 61 67.2
MD14G1106200 Malus domestica HOM05D005554 ORTHO05D007823 2.5e-11 73.9 41 82.9


User provided reference genes

Program Settings