Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A895G19 Lonicera japonica HOM05D001598 ORTHO05D007192 7.7e-203 710.3 367 100.0
Lj2C893G11 Lonicera japonica HOM05D001598 ORTHO05D007192 8.8e-183 643.7 428 82.2
Dinv32128 Davidia involucrata HOM05D001598 ORTHO05D007192 1.9e-156 556.2 440 67.7
vmacro14297 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 2.1e-147 526.2 443 65.0
Rhsim01G0197500 Rhododendron simsii HOM05D001598 ORTHO05D007192 6.0e-147 524.6 438 64.8
CSS0038227 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 5.1e-146 521.5 440 65.0
CSS0048937 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 5.1e-146 521.5 440 65.0
Potri.009G156400 Populus trichocarpa HOM05D001598 ORTHO05D007192 1.8e-143 513.1 438 62.6
TAR375G0698 Trochodendron aralioides HOM05D001598 ORTHO05D007192 1.5e-142 510.0 442 61.8
Hma1.2p1_0218F.1_g092460 Hydrangea macrophylla HOM05D001598 ORTHO05D007192 1.7e-141 506.5 440 62.5
Manes.11G103300 Manihot esculenta HOM05D001598 ORTHO05D007192 2.7e-139 499.2 425 63.3
DCAR_000741 Daucus carota HOM05D001598 ORTHO05D007192 4.6e-139 498.4 431 61.7
Sabra09G0122500 Salix brachista HOM05D001598 ORTHO05D007192 4.6e-139 498.4 437 62.2
COL.COLO4_25318 Corchorus olitorius HOM05D001598 ORTHO05D007192 1.3e-138 496.9 436 61.9
Gorai.009G080100 Gossypium raimondii HOM05D001598 ORTHO05D007192 8.7e-138 494.2 438 61.4
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 3.3e-137 492.3 438 61.2
CARHR191850 Cardamine hirsuta HOM05D001598 ORTHO05D007192 7.3e-137 491.1 441 58.3
Ciclev10014503m.g Citrus clementina HOM05D001598 ORTHO05D007192 7.3e-137 491.1 428 61.4
CiPaw.13G127200 Carya illinoinensis HOM05D001598 ORTHO05D007192 9.6e-137 490.7 438 61.6
AL6G32560 Arabidopsis lyrata HOM05D001598 ORTHO05D007192 1.6e-136 490.0 437 59.3
Gohir.A05G076000 Gossypium hirsutum HOM05D001598 ORTHO05D007192 2.8e-136 489.2 438 60.5
A03p10390 Brassica napus HOM05D001598 ORTHO05D007192 1.1e-135 487.3 437 58.8
Atru.chr3.2751 Acer truncatum HOM05D001598 ORTHO05D007192 1.4e-135 486.9 431 61.7
AT5G20990 Arabidopsis thaliana HOM05D001598 ORTHO05D007192 1.8e-135 486.5 437 58.8
Eucgr.J00614 Eucalyptus grandis HOM05D001598 ORTHO05D007192 3.1e-135 485.7 435 59.8
Sp6g23530 Schrenkiella parvula HOM05D001598 ORTHO05D007192 4.0e-135 485.3 437 58.6
Sopen01g004540 Solanum pennellii HOM05D001598 ORTHO05D007192 5.3e-135 485.0 441 59.6
CAN.G651.7 Capsicum annuum HOM05D001598 ORTHO05D007192 9.0e-135 484.2 441 59.9
MD11G1181200 Malus domestica HOM05D001598 ORTHO05D007192 1.2e-134 483.8 435 58.9
Solyc01g009050.3 Solanum lycopersicum HOM05D001598 ORTHO05D007192 1.2e-134 483.8 441 59.2
BraA03t10351Z Brassica rapa HOM05D001598 ORTHO05D007192 2.0e-134 483.0 437 58.6
C03p11930 Brassica napus HOM05D001598 ORTHO05D007192 2.6e-134 482.6 437 58.6
Thhalv10012894m.g Eutrema salsugineum HOM05D001598 ORTHO05D007192 2.6e-134 482.6 436 58.9
Carub.0006s1931 Capsella rubella HOM05D001598 ORTHO05D007192 5.8e-134 481.5 437 58.6
BolC3t13663H Brassica oleracea HOM05D001598 ORTHO05D007192 1.3e-133 480.3 437 58.4
GSVIVG01037501001 Vitis vinifera HOM05D001598 ORTHO05D007192 8.4e-133 477.6 435 60.2
AUR62020182 Chenopodium quinoa HOM05D001598 ORTHO05D007192 1.1e-132 477.2 422 60.7
CANSAT54G2824 Cannabis sativa HOM05D001598 ORTHO05D007192 1.4e-132 476.9 429 59.7
Prupe.6G153900 Prunus persica HOM05D001598 ORTHO05D007192 4.2e-132 475.3 435 57.7
Aqoxy3G02341 Aquilegia oxysepala HOM05D001598 ORTHO05D007192 7.1e-132 474.6 429 59.0
Glyma.02G272700 Glycine max HOM05D001598 ORTHO05D007192 1.2e-131 473.8 438 58.7
PSO063G3947 Papaver somniferum HOM05D001598 ORTHO05D007192 2.1e-131 473.0 429 58.3
EL10Ac7g16239 Beta vulgaris HOM05D001598 ORTHO05D007192 3.5e-131 472.2 471 55.8
Nitab4.5_0002300g0120 Nicotiana tabacum HOM05D001598 ORTHO05D007192 7.9e-131 471.1 441 57.6
HanXRQChr06g0180651 Helianthus annuus HOM05D001598 ORTHO05D007192 1.0e-130 470.7 436 59.2
RcHm_v2.0_Chr5g0048741 Rosa chinensis HOM05D001598 ORTHO05D007192 1.0e-130 470.7 429 57.8
CsaV3_1G041840 Cucumis sativus L. HOM05D001598 ORTHO05D007192 2.5e-129 466.1 430 57.9
TWI31G0930 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 4.3e-129 465.3 429 58.5
Cc01_g07890 Coffea canephora HOM05D001598 ORTHO05D007192 5.6e-129 464.9 436 56.9
ECA247G1799 Erigeron canadensis HOM05D001598 ORTHO05D007192 5.6e-129 464.9 435 58.6
MELO3C015599.2 Cucumis melo HOM05D001598 ORTHO05D007192 7.4e-129 464.5 430 57.7
FvH4_3g26260 Fragaria vesca HOM05D001598 ORTHO05D007192 2.1e-128 463.0 433 56.6
Sc21g0006570 Simmondsia chinensis HOM05D001598 ORTHO05D007192 2.1e-128 463.0 435 57.5
Actinidia22467 Actinidia chinensis HOM05D001598 ORTHO05D007192 3.7e-128 462.2 442 59.0
LjContig00564g0017485 Lotus japonicus HOM05D001598 ORTHO05D007192 3.7e-128 462.2 438 58.2
PGR119G0245 Punica granatum HOM05D001598 ORTHO05D007192 3.7e-128 462.2 429 58.7
Phvul.008G209600 Phaseolus vulgaris HOM05D001598 ORTHO05D007192 6.2e-128 461.5 435 57.0
Sed0001025 Sechium edule HOM05D001598 ORTHO05D007192 6.2e-128 461.5 429 56.6
arahy.Tifrunner.gnm1.ann1.4UW9RQ Arachis hypogaea HOM05D001598 ORTHO05D007192 1.8e-127 459.9 442 56.6
arahy.Tifrunner.gnm1.ann1.IS34PQ Arachis hypogaea HOM05D001598 ORTHO05D007192 3.1e-127 459.1 442 56.3
MBI07_g03077_MAGBIO Magnolia biondii HOM05D001598 ORTHO05D007192 3.1e-127 459.1 414 59.4
Lsat_1_v5_gn_2_37520 Lactuca sativa HOM05D001598 ORTHO05D007192 5.3e-127 458.4 435 58.9
Hund20974 Selenicereus undatus HOM05D001598 ORTHO05D007192 9.0e-127 457.6 431 58.2
Lalb_Chr10g0105801 Lupinus albus HOM05D001598 ORTHO05D007192 5.8e-126 454.9 429 57.6
VMungo0647G2429 Vigna mungo HOM05D001598 ORTHO05D007192 1.4e-124 450.3 429 57.1
MSTRG.12417 Avicennia marina HOM05D001598 ORTHO05D007192 1.9e-124 449.9 429 58.3
SGA_v2.0_scaffold16G07584 Striga asiatica HOM05D001598 ORTHO05D007192 2.4e-124 449.5 430 56.3
Medtr5g087490 Medicago truncatula HOM05D001598 ORTHO05D007192 4.2e-124 448.7 438 55.9
SalBow3G4459 Salvia bowleyana HOM05D001598 ORTHO05D007192 9.3e-124 447.6 437 57.0
TPR.G11692 Trifolium pratense HOM05D001598 ORTHO05D007192 9.3e-124 447.6 435 56.1
ClCG03G014390 Citrullus lanatus HOM05D001598 ORTHO05D007192 1.0e-122 444.1 431 55.7
Migut.N02410 Erythranthe guttata HOM05D001598 ORTHO05D007192 1.9e-121 439.9 430 55.8
Aa31LG1G13740 Aethionema arabicum HOM05D001598 ORTHO05D007192 1.3e-120 437.2 428 55.1
ATR0215G007 Amborella trichopoda HOM05D001598 ORTHO05D007192 4.0e-119 432.2 421 54.6
unitig_8.g2986 Utricularia gibba HOM05D001598 ORTHO05D007192 4.2e-116 422.2 429 54.8
CDE02G2133 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 2.7e-115 419.5 394 57.1
Zm00001eb432770 Zea mays HOM05D001598 ORTHO05D007192 1.0e-114 417.5 422 53.8
Peaxi162Scf00050g02227 Petunia axillaris HOM05D001598 ORTHO05D007192 1.5e-113 413.7 434 54.4
Haze_23633 Corylus avellana HOM05D001598 ORTHO05D007192 4.3e-113 412.1 447 53.2
AUR62001598 Chenopodium quinoa HOM05D001598 ORTHO05D007192 1.4e-111 407.1 463 51.0
FAN25G1601 Fragaria x ananassa HOM05D001598 ORTHO05D007192 1.2e-110 404.1 433 51.5
FAN21G0325 Fragaria x ananassa HOM05D001598 ORTHO05D007192 3.4e-110 402.5 433 51.3
Ah.08g222590 Amaranthus hybridus HOM05D001598 ORTHO05D007192 1.9e-108 396.7 382 57.9
FAN11G2542 Fragaria x ananassa HOM05D001598 ORTHO05D007192 1.9e-108 396.7 433 50.6
Nitab4.5_0000428g0110 Nicotiana tabacum HOM05D001598 ORTHO05D007192 4.6e-107 392.1 419 53.9
Psat2g023160 Pisum sativum HOM05D001598 ORTHO05D007192 9.1e-103 377.9 383 54.8
QL01p007286 Quercus lobata HOM05D001598 ORTHO05D007192 5.9e-102 375.2 303 65.7
Pp3c14_4050 Physcomitrium patens HOM05D001598 ORTHO05D007192 1.3e-101 374.0 431 47.6
Cpa.g.sc34.224 Carica papaya HOM05D001598 ORTHO05D007192 1.4e-100 370.5 395 53.9
Ca_06138_v3 Cicer arietinum L. HOM05D001598 ORTHO05D007192 1.0e-98 364.4 316 61.7
Oeu051504.1 Olea europaea HOM05D001598 ORTHO05D007192 3.3e-97 359.4 446 49.3
CDE06G2705 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 2.2e-96 356.7 433 49.0
Thecc.09G265000 Theobroma cacao HOM05D001598 ORTHO05D007192 2.6e-94 349.7 438 48.6
SMO145G0256 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 2.9e-93 346.3 433 45.5
HPP92_013468 Vanilla planifolia HOM05D001598 ORTHO05D007192 3.8e-93 345.9 430 47.7
HPP92_013469 Vanilla planifolia HOM05D001598 ORTHO05D007192 5.9e-86 322.0 298 56.4
SEGI_00915 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 1.0e-85 321.2 294 57.8
SEGI_02371 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 1.0e-85 321.2 294 57.8
AagrBONN_evm.TU.Sc2ySwM_228.3025 Anthoceros agrestis HOM05D001598 ORTHO05D007192 3.0e-82 309.7 426 43.2
Cre10.g451400 Chlamydomonas reinhardtii HOM05D001598 ORTHO05D007192 2.7e-78 296.6 461 40.1
Mapoly1495s0001 Marchantia polymorpha HOM05D001598 ORTHO05D007192 1.4e-74 284.3 291 52.2
Atru.ctg664.11 Acer truncatum HOM05D001598 ORTHO05D007192 2.2e-72 276.9 244 63.1
AagrBONN_evm.TU.Sc2ySwM_117.1323 Anthoceros agrestis HOM05D001598 ORTHO05D007192 2.2e-64 250.4 363 42.1
SHI25335 Sapria himalayana HOM05D001598 ORTHO05D000001 7.0e-63 245.4 208 60.1
MCO09G295 Micromonas commoda HOM05D001598 ORTHO05D007192 4.6e-54 216.1 443 35.9
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 1.3e-45 188.0 404 34.2
TPR.G11462 Trifolium pratense HOM05D001598 ORTHO05D007192 8.6e-45 185.3 198 53.0
vmacro23059 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 2.3e-42 177.2 249 47.0
QL01p007301 Quercus lobata HOM05D001598 ORTHO05D007192 3.6e-35 153.3 89 83.1
HanXRQChr07g0205981 Helianthus annuus HOM05D001598 ORTHO05D007192 1.5e-33 147.9 89 79.8
Nn1g00103 Nelumbo nucifera HOM05D001598 ORTHO05D007192 2.9e-32 143.7 89 76.4
SHI25334 Sapria himalayana HOM05D001598 ORTHO05D000001 1.0e-29 135.2 85 74.1
Mapoly0056s0125 Marchantia polymorpha HOM05D001598 ORTHO05D007192 3.1e-26 123.6 89 65.2
TPR.G24627 Trifolium pratense HOM05D001598 ORTHO05D007192 8.4e-24 115.5 117 53.8
Ca_14173_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 3.9e-21 106.7 96 61.5
Ca_02574_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 2.5e-20 104.0 84 63.1
CBR_g53773 Chara braunii HOM05D000019 ORTHO05D000002 8.4e-16 89.0 87 51.7
CBR_g53784 Chara braunii HOM05D001598 ORTHO05D007192 1.1e-15 88.6 147 36.7
Os04g0661600 Oryza sativa ssp. japonica HOM05D001598 ORTHO05D007192 6.0e-14 82.8 63 66.7
Gohir.D02G147550 Gossypium hirsutum HOM05D006828 ORTHO05D008312 1.8e-13 81.3 49 81.6
Gorai.013G167300 Gossypium raimondii HOM05D006828 ORTHO05D008312 1.8e-13 81.3 49 81.6
Gohir.D05G085901 Gossypium hirsutum HOM05D001598 ORTHO05D008312 1.6e-11 74.7 49 75.5
TPR.G22712 Trifolium pratense HOM05D001598 ORTHO05D046738 1.2e-09 68.6 61 59.0
SGA_v2.0_scaffold6G03251 Striga asiatica HOM05D001598 ORTHO05D007192 3.4e-09 67.0 195 27.7
Sc01g0005570 Simmondsia chinensis HOM05D001598 ORTHO05D007192 1.7e-08 64.7 64 53.1
Glyma.16G121250 Glycine max HOM05D001598 ORTHO05D046738 3.2e-07 60.5 64 53.1


User provided reference genes

Program Settings