Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A891G11 Lonicera japonica HOM05D004148 ORTHO05D004709 0.0e+00 2123.2 1072 100.0
Dinv32838 Davidia involucrata HOM05D004148 ORTHO05D004709 0.0e+00 1094.3 1153 54.7
Cfa010235 Carpinus fangiana HOM05D004148 ORTHO05D004709 1.2e-293 1013.4 1154 51.5
Thecc.09G266000 Theobroma cacao HOM05D004148 ORTHO05D004709 4.0e-292 1008.4 1153 51.4
Prupe.6G151400 Prunus persica HOM05D004148 ORTHO05D004709 1.6e-288 996.5 1116 52.2
Atru.chr3.3014 Acer truncatum HOM05D004148 ORTHO05D004709 5.2e-284 981.5 1146 50.0
QL01p018674 Quercus lobata HOM05D004148 ORTHO05D004709 1.7e-279 966.5 1145 50.4
TAR623G1397 Trochodendron aralioides HOM05D004148 ORTHO05D004709 4.3e-278 961.8 1159 50.0
Rhsim13G0199700 Rhododendron simsii HOM05D004148 ORTHO05D004709 3.6e-277 958.7 1152 49.7
RcHm_v2.0_Chr5g0049541 Rosa chinensis HOM05D004148 ORTHO05D004709 2.4e-276 956.1 1133 50.7
Actinidia12896 Actinidia chinensis HOM05D001400 ORTHO05D001795 4.0e-276 955.3 1129 50.3
Gohir.A05G076400 Gossypium hirsutum HOM05D004148 ORTHO05D004709 1.3e-274 950.3 1158 49.9
Gorai.009G080700 Gossypium raimondii HOM05D004148 ORTHO05D004709 3.2e-273 945.7 1149 49.7
MD11G1178600 Malus domestica HOM05D004148 ORTHO05D004709 2.4e-268 929.5 1145 48.7
Lsat_1_v5_gn_5_75780 Lactuca sativa HOM05D004148 ORTHO05D004709 4.2e-265 918.7 1099 50.4
Ciclev10027694m.g Citrus clementina HOM05D004148 ORTHO05D004709 3.9e-263 912.1 1149 48.4
FAN17G2621 Fragaria x ananassa HOM05D004148 ORTHO05D004709 2.4e-260 902.9 1124 48.8
TWI60G0836 Tripterygium wilfordii HOM05D004148 ORTHO05D004709 9.0e-260 901.0 1156 47.7
ECA233G2337 Erigeron canadensis HOM05D004148 ORTHO05D004709 2.2e-258 896.3 1130 48.5
Oeu048810.1 Olea europaea HOM05D004148 ORTHO05D004709 3.8e-258 895.6 1146 47.4
FvH4_4g33990 Fragaria vesca HOM05D004148 ORTHO05D004709 6.4e-258 894.8 1126 48.2
FAN22G0787 Fragaria x ananassa HOM05D004148 ORTHO05D004709 2.1e-256 889.8 1127 48.4
Potri.009G153300 Populus trichocarpa HOM05D004148 ORTHO05D004709 1.3e-253 880.6 1155 47.4
CANSAT54G2785 Cannabis sativa HOM05D004148 ORTHO05D004709 1.6e-253 880.2 1131 48.7
Nn2g14486 Nelumbo nucifera HOM05D004148 ORTHO05D004709 2.1e-253 879.8 1164 45.7
FAN12G2472 Fragaria x ananassa HOM05D004148 ORTHO05D004709 1.5e-251 873.6 1129 47.5
GSVIVG01022379001 Vitis vinifera HOM05D004148 ORTHO05D004709 1.1e-249 867.5 1091 49.1
Gohir.D05G079200 Gossypium hirsutum HOM05D004148 ORTHO05D004709 2.7e-248 862.8 1098 48.1
Cc00_g06190 Coffea canephora HOM05D004148 ORTHO05D004709 9.0e-244 847.8 1154 44.9
HanXRQChr03g0089821 Helianthus annuus HOM05D004148 ORTHO05D004709 2.6e-243 846.3 1091 46.6
Ah.15g099170 Amaranthus hybridus HOM05D004148 ORTHO05D004709 3.5e-240 835.9 1133 45.8
PGR102G2778 Punica granatum HOM05D004148 ORTHO05D004709 3.3e-238 829.3 1135 45.7
Solyc11g071570.3 Solanum lycopersicum HOM05D004148 ORTHO05D004709 9.7e-238 827.8 1153 44.2
Hma1.2p1_0218F.1_g092390 Hydrangea macrophylla HOM05D004148 ORTHO05D004709 2.2e-234 816.6 1243 43.9
Peaxi162Scf00217g00627 Petunia axillaris HOM05D004148 ORTHO05D004709 1.1e-233 814.3 1154 43.3
EL10Ac7g16248 Beta vulgaris HOM05D004148 ORTHO05D004709 1.4e-233 813.9 1139 45.2
Sed0012220 Sechium edule HOM05D004148 ORTHO05D004709 7.2e-233 811.6 1144 44.2
Sopen11g029250 Solanum pennellii HOM05D004148 ORTHO05D004709 1.6e-232 810.4 1185 42.6
Phvul.002G053700 Phaseolus vulgaris HOM05D004148 ORTHO05D004709 1.4e-231 807.4 1142 44.5
Sc06g0008560 Simmondsia chinensis HOM05D004148 ORTHO05D004709 8.8e-231 804.7 1151 43.1
CsaV3_3G017640 Cucumis sativus L. HOM05D004148 ORTHO05D004709 2.5e-230 803.1 1131 43.2
Aqoxy1G00551 Aquilegia oxysepala HOM05D004148 ORTHO05D004709 4.3e-230 802.4 1157 42.7
MELO3C020298.2 Cucumis melo HOM05D004148 ORTHO05D004709 5.7e-230 802.0 1132 43.6
Migut.D00721 Erythranthe guttata HOM05D004148 ORTHO05D004709 9.7e-230 801.2 1134 44.1
CAN.G439.18 Capsicum annuum HOM05D004148 ORTHO05D004709 2.8e-229 799.7 1160 43.7
PSO339G2294 Papaver somniferum HOM05D004148 ORTHO05D004709 4.8e-229 798.9 1178 42.6
MSTRG.21311 Avicennia marina HOM05D004148 ORTHO05D004709 3.1e-228 796.2 1136 43.5
PSO384G5014 Papaver somniferum HOM05D004148 ORTHO05D004709 4.1e-228 795.8 1176 42.4
VMungo1215G0285 Vigna mungo HOM05D004148 ORTHO05D004709 1.2e-227 794.3 1121 45.0
Lj1g0011831 Lotus japonicus HOM05D004148 ORTHO05D004709 1.5e-227 793.9 1147 44.5
Glyma.01G244400 Glycine max HOM05D004148 ORTHO05D004709 2.9e-226 789.6 1135 43.7
ClCG05G010880 Citrullus lanatus HOM05D004148 ORTHO05D004709 2.5e-225 786.6 1144 43.3
THA.LOC104815063 Tarenaya hassleriana HOM05D004148 ORTHO05D004709 7.2e-225 785.0 1150 44.1
Nitab4.5_0005222g0040 Nicotiana tabacum HOM05D004148 ORTHO05D004709 1.8e-223 780.4 1164 42.9
Psat4g228400 Pisum sativum HOM05D004148 ORTHO05D004709 7.0e-220 768.5 1135 43.4
Nitab4.5_0000615g0090 Nicotiana tabacum HOM05D004148 ORTHO05D004709 4.5e-219 765.8 1129 43.3
Hund18819 Selenicereus undatus HOM05D004148 ORTHO05D004709 7.7e-219 765.0 1141 43.1
SalBow6G3333 Salvia bowleyana HOM05D004148 ORTHO05D004709 6.5e-218 761.9 1108 44.2
AUR62020189 Chenopodium quinoa HOM05D004148 ORTHO05D004709 1.9e-217 760.4 1101 44.2
Sp5g17550 Schrenkiella parvula HOM05D004148 ORTHO05D004709 2.6e-206 723.4 1153 41.9
Carub.0005s0948 Capsella rubella HOM05D004148 ORTHO05D004709 4.4e-206 722.6 1135 42.0
BcaB02g10777 Brassica carinata HOM05D004148 ORTHO05D004709 9.1e-204 714.9 1154 41.4
AT3G43610 Arabidopsis thaliana HOM05D004148 ORTHO05D004709 2.0e-203 713.8 1142 40.9
Medtr5g004880 Medicago truncatula HOM05D004148 ORTHO05D004709 1.3e-202 711.1 1138 40.9
AL5G21540 Arabidopsis lyrata HOM05D004148 ORTHO05D004709 3.8e-202 709.5 1153 41.1
Thhalv10002374m.g Eutrema salsugineum HOM05D004148 ORTHO05D004709 4.7e-200 702.6 1151 40.3
BcaC01g02217 Brassica carinata HOM05D004148 ORTHO05D004709 8.0e-200 701.8 1165 40.7
A06p19850 Brassica napus HOM05D004148 ORTHO05D004709 2.8e-197 693.3 1151 40.1
BraA06t25067Z Brassica rapa HOM05D004148 ORTHO05D004709 1.8e-196 690.6 1152 40.5
SGA_v2.0_scaffold29G12109 Striga asiatica HOM05D004148 ORTHO05D004709 2.5e-193 680.2 1164 40.4
C03p72000 Brassica napus HOM05D004148 ORTHO05D004709 3.6e-192 676.4 1147 40.5
Lalb_Chr16g0376251 Lupinus albus HOM05D004148 ORTHO05D004709 8.0e-192 675.2 1133 40.7
BcaC01g01775 Brassica carinata HOM05D004148 ORTHO05D004709 1.4e-191 674.5 1147 40.1
Aa31LG4G13420 Aethionema arabicum HOM05D004148 ORTHO05D004709 8.9e-191 671.8 1154 41.2
BolC3t19498H Brassica oleracea HOM05D004148 ORTHO05D004709 2.0e-190 670.6 1147 40.0
Duzib168G1551 Durio zibethinus HOM05D004148 ORTHO05D004709 2.9e-186 656.8 860 46.5
Cpa.g.sc103.97 Carica papaya HOM05D004148 ORTHO05D004709 7.5e-182 642.1 915 45.4
arahy.Tifrunner.gnm1.ann1.J94639 Arachis hypogaea HOM05D004148 ORTHO05D004709 2.1e-176 624.0 1123 36.6
MBI11_g07705_MAGBIO Magnolia biondii HOM05D004148 ORTHO05D004709 6.4e-173 612.5 1173 37.5
Manes.04G054800 Manihot esculenta HOM05D004148 ORTHO05D004709 3.2e-172 610.1 830 45.3
ATR0697G020 Amborella trichopoda HOM05D004148 ORTHO05D004709 1.7e-165 587.8 1224 35.7
MD03G1162400 Malus domestica HOM05D004148 ORTHO05D004709 5.1e-162 576.2 590 56.6
Eucgr.B03795 Eucalyptus grandis HOM05D004148 ORTHO05D004709 1.0e-154 552.0 913 40.4
arahy.Tifrunner.gnm1.ann1.SF9HJV Arachis hypogaea HOM05D004148 ORTHO05D004709 3.9e-154 550.1 911 39.1
Haze_23628 Corylus avellana HOM05D004148 ORTHO05D004709 2.5e-153 547.4 473 64.1
Ca_24340_v3 Cicer arietinum L. HOM05D004148 ORTHO05D004709 1.8e-151 541.2 848 41.3
CSS0039701 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 2.9e-149 533.9 473 61.3
CDE07G1769 Ceratophyllum demersum HOM05D004148 ORTHO05D004709 9.6e-145 518.8 1092 36.4
Zm00001eb073760 Zea mays HOM05D004148 ORTHO05D004709 3.4e-142 510.4 1149 33.3
CSS0039756 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 7.4e-137 492.7 473 59.0
BcaB01g00875 Brassica carinata HOM05D004148 ORTHO05D004709 4.0e-135 486.9 898 37.6
DCAR_012264 Daucus carota HOM05D000495 ORTHO05D000357 1.0e-125 455.7 411 62.0
CARHR108980 Cardamine hirsuta HOM05D004148 ORTHO05D004709 4.6e-123 446.8 680 43.1
vmacro04062 Vaccinium macrocarpon HOM05D004148 ORTHO05D004709 3.9e-122 443.7 807 37.3
BolSC21t60233H Brassica oleracea HOM05D004148 ORTHO05D004709 5.1e-114 416.8 584 44.9
CiPaw.13G126900 Carya illinoinensis HOM05D004148 ORTHO05D004709 2.6e-110 404.4 705 39.3
HPP92_019532 Vanilla planifolia HOM05D004148 ORTHO05D004709 3.6e-99 367.5 911 33.8
vmacro04063 Vaccinium macrocarpon HOM05D004148 ORTHO05D004709 5.2e-90 337.0 300 62.3
Hma1.2p1_2711F.1_g327330 Hydrangea macrophylla HOM05D004148 ORTHO05D004709 2.8e-88 331.3 466 42.9
Carub.0005s0933 Capsella rubella HOM05D004148 ORTHO05D004709 1.2e-86 325.9 693 34.3
Zm00001eb428880 Zea mays HOM05D004148 ORTHO05D004709 6.5e-85 320.1 1134 26.5
COL.COLO4_25330 Corchorus olitorius HOM05D004148 ORTHO05D004709 2.5e-84 318.2 298 60.1
MD03G1162300 Malus domestica HOM05D004148 ORTHO05D004709 3.6e-83 314.3 441 42.4
Mapoly0099s0003 Marchantia polymorpha HOM05D004148 ORTHO05D004709 4.3e-76 290.8 1311 26.4
CSS0002631 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 3.0e-74 284.6 194 70.6
Carub.0005s0934 Capsella rubella HOM05D004148 ORTHO05D004709 3.7e-72 277.7 314 54.1
FvH4_3g27031 Fragaria vesca HOM05D004148 ORTHO05D004709 1.4e-71 275.8 457 40.7
Pp3c11_24620 Physcomitrium patens HOM05D004148 ORTHO05D004709 2.2e-64 251.9 1038 25.8
AUR62001591 Chenopodium quinoa HOM05D004148 ORTHO05D004709 2.9e-64 251.5 192 64.6
unitig_21.g20311 Utricularia gibba HOM05D004148 ORTHO05D004709 7.0e-63 246.9 671 31.0
Cpa.g.sc103.96 Carica papaya HOM05D004148 ORTHO05D004709 3.5e-62 244.6 208 59.1
unitig_21.g20312 Utricularia gibba HOM05D004148 ORTHO05D004709 3.3e-60 238.0 360 43.1
FvH4_3g27030 Fragaria vesca HOM05D004148 ORTHO05D004709 2.0e-49 202.2 209 53.6
Os04g0566900 Oryza sativa ssp. japonica HOM05D004148 ORTHO05D004709 2.6e-49 201.8 294 43.2
SHI25296 Sapria himalayana HOM05D004148 ORTHO05D004709 1.1e-47 196.4 237 51.9
A06p26680 Brassica napus HOM05D004148 ORTHO05D004709 7.1e-47 193.7 282 41.5
Haze_23627 Corylus avellana HOM05D004148 ORTHO05D004709 1.2e-46 193.0 399 35.6
CARHR289540 Cardamine hirsuta HOM05D004148 ORTHO05D004709 4.6e-46 191.0 353 37.1
FAN16G3212 Fragaria x ananassa HOM05D004148 ORTHO05D004709 1.6e-43 182.6 397 35.3
SEGI_35526 Sequoiadendron giganteum HOM05D004148 ORTHO05D004709 4.2e-39 167.9 272 41.9
CARHR148720 Cardamine hirsuta HOM05D004148 ORTHO05D004709 2.7e-38 165.2 205 46.3
SHI25295 Sapria himalayana HOM05D004148 ORTHO05D004709 1.7e-37 162.5 180 47.8
CSS0008927 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 8.7e-37 160.2 113 69.0
AagrBONN_evm.TU.Sc2ySwM_228.375 Anthoceros agrestis HOM05D004148 ORTHO05D004709 5.6e-36 157.5 398 33.7
SEGI_18042 Sequoiadendron giganteum HOM05D004148 ORTHO05D004709 7.3e-36 157.1 720 26.7
Os04g0566800 Oryza sativa ssp. japonica HOM05D004148 ORTHO05D004709 5.3e-34 151.0 152 49.3
Psat6g175800 Pisum sativum HOM05D004148 ORTHO05D004709 9.6e-28 130.2 170 44.7
C05p34090 Brassica napus HOM05D004148 ORTHO05D004709 4.0e-26 124.8 139 54.0
BolC8t48007H Brassica oleracea HOM05D004148 ORTHO05D004709 9.0e-26 123.6 213 43.2
CBR_g23077 Chara braunii HOM05D004148 ORTHO05D004709 2.4e-23 115.5 349 30.1
CARHR148440 Cardamine hirsuta HOM05D004148 ORTHO05D004709 2.1e-22 112.5 119 53.8
BraA06t25600Z Brassica rapa HOM05D004148 ORTHO05D004709 3.7e-19 101.7 107 50.5
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 1.5e-17 96.3 218 36.7
CSS0019415 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 5.8e-17 94.4 55 81.8
A08p06640 Brassica napus HOM05D004148 ORTHO05D004709 1.0e-16 93.6 113 54.0
BraA07t28462Z Brassica rapa HOM05D004148 ORTHO05D004709 1.0e-16 93.6 113 54.0
SHI25291 Sapria himalayana HOM05D004148 ORTHO05D004709 3.8e-16 91.7 62 66.1
SMO172G0086 Selaginella moellendorffii HOM05D004148 ORTHO05D004709 6.0e-14 84.3 109 36.7
A08p03240 Brassica napus HOM05D004148 ORTHO05D004709 2.3e-13 82.4 113 49.6
SHI25294 Sapria himalayana HOM05D004148 ORTHO05D004709 5.1e-13 81.3 203 32.5
CARHR148450 Cardamine hirsuta HOM05D004148 ORTHO05D004709 8.7e-13 80.5 343 26.2
A09p33570 Brassica napus HOM05D004148 ORTHO05D004709 2.5e-12 79.0 111 48.6
A10p16420 Brassica napus HOM05D004148 ORTHO05D004709 2.5e-12 79.0 111 48.6
C06p15540 Brassica napus HOM05D004148 ORTHO05D004709 2.5e-12 79.0 111 48.6
C08p23060 Brassica napus HOM05D004148 ORTHO05D004709 2.5e-12 79.0 111 48.6
CARHR108680 Cardamine hirsuta HOM05D004148 ORTHO05D004709 2.5e-12 79.0 55 67.3
BraA05t21194Z Brassica rapa HOM05D004148 ORTHO05D004709 4.3e-12 78.2 113 48.7
A05p23300 Brassica napus HOM05D004148 ORTHO05D004709 3.1e-10 72.0 117 47.9
Psat3g010920 Pisum sativum HOM05D004148 ORTHO05D004709 5.3e-10 71.2 218 29.4
Thhalv10029231m.g Eutrema salsugineum HOM05D004148 ORTHO05D004709 9.0e-10 70.5 83 49.4
RcHm_v2.0_Chr6g0285361 Rosa chinensis HOM05D004148 ORTHO05D004709 9.0e-10 70.5 57 54.4
SHI25292 Sapria himalayana HOM05D004148 ORTHO05D004709 4.5e-09 68.2 62 48.4
Haze_23626 Corylus avellana HOM05D004148 ORTHO05D004709 1.1e-07 63.5 36 75.0
Zm00001eb254140 Zea mays HOM05D004148 ORTHO05D004709 3.2e-07 62.0 48 54.2
Zm00001eb328610 Zea mays HOM05D004148 ORTHO05D004709 3.2e-07 62.0 48 54.2
Psat2g063360 Pisum sativum HOM05D004963 ORTHO05D006638 5.5e-07 61.2 116 36.2


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