Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A526T20 Lonicera japonica HOM05D007191 ORTHO05D009370 8.6e-168 593.6 299 100.0
Dinv36956 Davidia involucrata HOM05D007191 ORTHO05D009370 1.1e-95 354.0 356 57.6
Dinv13563 Davidia involucrata HOM05D007191 ORTHO05D009370 9.0e-93 344.4 355 56.9
CSS0046556 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 9.4e-90 334.3 368 53.8
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 6.1e-89 331.6 353 54.1
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 3.0e-88 329.3 295 60.0
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 3.3e-87 325.9 299 59.2
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 1.4e-85 320.5 352 53.7
Actinidia25299 Actinidia chinensis HOM05D007191 ORTHO05D009370 5.3e-85 318.5 353 54.4
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 1.2e-84 317.4 361 52.4
Solyc11g010900.2 Solanum lycopersicum HOM05D007191 ORTHO05D009370 1.5e-84 317.0 293 58.4
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 4.5e-84 315.5 349 52.1
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 2.2e-83 313.2 307 55.7
Peaxi162Scf00085g00523 Petunia axillaris HOM05D007191 ORTHO05D009370 5.0e-83 312.0 299 55.9
Atru.chr3.1215 Acer truncatum HOM05D007191 ORTHO05D009370 1.1e-82 310.8 331 54.1
Manes.13G101800 Manihot esculenta HOM05D007191 ORTHO05D009370 2.5e-82 309.7 341 50.7
CANSAT01G2982 Cannabis sativa HOM05D007191 ORTHO05D009370 5.5e-82 308.5 347 51.3
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 2.7e-81 306.2 355 51.5
Ciclev10025907m.g Citrus clementina HOM05D007191 ORTHO05D009370 3.6e-81 305.8 301 55.8
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 4.7e-81 305.4 290 56.9
Manes.13G092280 Manihot esculenta HOM05D007191 ORTHO05D009370 6.1e-81 305.1 340 49.7
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea HOM05D007191 ORTHO05D009370 7.9e-81 304.7 330 53.9
ClCG10G008240 Citrullus lanatus HOM05D007191 ORTHO05D009370 3.9e-80 302.4 293 54.9
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 6.7e-80 301.6 347 51.3
Haze_03901 Corylus avellana HOM05D007191 ORTHO05D009370 8.8e-80 301.2 414 46.4
FvH4_1g19321 Fragaria vesca HOM05D007191 ORTHO05D009370 8.8e-80 301.2 354 50.3
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 3.3e-79 299.3 353 50.1
Thecc.01G088100 Theobroma cacao HOM05D007191 ORTHO05D009370 4.4e-79 298.9 349 48.7
TPR.G29816 Trifolium pratense HOM05D007191 ORTHO05D009370 4.4e-79 298.9 348 50.3
Ca_22623_v3 Cicer arietinum L. HOM05D007191 ORTHO05D009370 9.7e-79 297.7 347 50.7
Medtr8g068220 Medicago truncatula HOM05D007191 ORTHO05D009370 3.7e-78 295.8 347 49.6
TWI74G0882 Tripterygium wilfordii HOM05D007191 ORTHO05D009370 1.1e-77 294.3 376 48.4
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 3.1e-77 292.7 295 55.3
CsaV3_3G006990 Cucumis sativus L. HOM05D007191 ORTHO05D009370 4.1e-77 292.4 348 49.7
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea HOM05D007191 ORTHO05D009370 9.1e-77 291.2 352 50.6
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 9.1e-77 291.2 298 52.7
THA.LOC104804178 Tarenaya hassleriana HOM05D007191 ORTHO05D009370 9.1e-77 291.2 336 50.6
Gorai.007G232000 Gossypium raimondii HOM05D007191 ORTHO05D009370 2.6e-76 289.7 337 49.9
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 3.5e-76 289.3 346 51.4
Duzib147G1243 Durio zibethinus HOM05D007191 ORTHO05D009370 3.5e-76 289.3 342 48.5
MELO3C014951.2 Cucumis melo HOM05D007191 ORTHO05D009370 5.9e-76 288.5 348 49.7
HanXRQChr09g0259541 Helianthus annuus HOM05D007191 ORTHO05D009370 7.7e-76 288.1 292 54.8
FAN19G0835 Fragaria x ananassa HOM05D007191 ORTHO05D000122 1.0e-75 287.7 342 50.3
FAN19G2137 Fragaria x ananassa HOM05D007191 ORTHO05D000122 1.3e-75 287.3 342 50.3
Cpa.g.sc55.6 Carica papaya HOM05D007191 ORTHO05D009370 1.7e-75 287.0 355 49.6
AUR62003688 Chenopodium quinoa HOM05D007191 ORTHO05D009370 1.7e-75 287.0 322 50.3
VMungo0251G2065 Vigna mungo HOM05D007191 ORTHO05D009370 1.7e-75 287.0 315 51.7
Gohir.A11G207400 Gossypium hirsutum HOM05D007191 ORTHO05D009370 2.2e-75 286.6 337 49.6
Lj4g0026970 Lotus japonicus HOM05D007191 ORTHO05D009370 2.2e-75 286.6 347 49.0
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 2.9e-75 286.2 323 50.5
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 3.8e-75 285.8 288 55.2
BcaNung00953 Brassica carinata HOM05D007191 ORTHO05D009370 6.5e-75 285.0 308 51.3
Phvul.003G287700 Phaseolus vulgaris HOM05D007191 ORTHO05D009370 1.4e-74 283.9 296 53.7
Aqoxy6G01485 Aquilegia oxysepala HOM05D007191 ORTHO05D009370 1.9e-74 283.5 290 53.1
Gohir.D11G215700 Gossypium hirsutum HOM05D007191 ORTHO05D009370 2.5e-74 283.1 337 49.3
A01p01070 Brassica napus HOM05D007191 ORTHO05D009370 4.2e-74 282.3 308 51.6
BraA01t00105Z Brassica rapa HOM05D007191 ORTHO05D009370 4.2e-74 282.3 308 51.6
Thhalv10025567m.g Eutrema salsugineum HOM05D007191 ORTHO05D009370 4.2e-74 282.3 292 52.4
AL7G12620 Arabidopsis lyrata HOM05D007191 ORTHO05D009370 5.5e-74 282.0 293 52.2
BolC1t00117H Brassica oleracea HOM05D007191 ORTHO05D009370 5.5e-74 282.0 308 50.6
AUR62018000 Chenopodium quinoa HOM05D007191 ORTHO05D009370 5.5e-74 282.0 289 52.9
AT4G38020 Arabidopsis thaliana HOM05D007191 ORTHO05D009370 7.2e-74 281.6 332 49.1
C01p01190 Brassica napus HOM05D007191 ORTHO05D009370 7.2e-74 281.6 308 50.6
Oeu017115.1 Olea europaea HOM05D007191 ORTHO05D009370 7.2e-74 281.6 341 48.7
Sed0016887 Sechium edule HOM05D007191 ORTHO05D009370 7.2e-74 281.6 278 55.4
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 9.4e-74 281.2 286 54.9
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 9.4e-74 281.2 345 49.0
Cfa006863 Carpinus fangiana HOM05D007191 ORTHO05D000122 2.7e-73 279.6 380 46.3
PSO675G0552 Papaver somniferum HOM05D007191 ORTHO05D009370 2.7e-73 279.6 327 48.3
CARHR246430 Cardamine hirsuta HOM05D007191 ORTHO05D009370 3.6e-73 279.3 336 47.9
Lalb_Chr16g0392111 Lupinus albus HOM05D007191 ORTHO05D009370 3.6e-73 279.3 353 48.2
Carub.0007s0220 Capsella rubella HOM05D007191 ORTHO05D009370 1.8e-72 276.9 341 47.5
Ah.03g143260 Amaranthus hybridus HOM05D007191 ORTHO05D009370 1.5e-71 273.9 289 52.2
Nitab4.5_0005446g0010 Nicotiana tabacum HOM05D007191 ORTHO05D009370 2.0e-71 273.5 288 53.5
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 2.6e-71 273.1 290 52.8
PSO541G2681 Papaver somniferum HOM05D007191 ORTHO05D009370 7.4e-71 271.6 318 47.8
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 2.2e-70 270.0 285 51.6
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 1.4e-69 267.3 358 45.0
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 1.8e-69 266.9 361 44.6
Migut.H02278 Erythranthe guttata HOM05D007191 ORTHO05D009370 8.5e-67 258.1 357 44.0
Nn5g29827 Nelumbo nucifera HOM05D007191 ORTHO05D009370 4.0e-64 249.2 304 47.0
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 1.7e-62 243.8 248 54.8
SalBow3G4077 Salvia bowleyana HOM05D007191 ORTHO05D009370 2.8e-62 243.0 365 43.0
unitig_27.g25347 Utricularia gibba HOM05D007191 ORTHO05D009370 2.8e-62 243.0 275 49.8
CAN.G1771.10 Capsicum annuum HOM05D007191 ORTHO05D009370 5.3e-61 238.8 252 52.0
Sc03g0000490 Simmondsia chinensis HOM05D007191 ORTHO05D009370 7.7e-60 235.0 288 48.3
SGA_v2.0_scaffold108G30936 Striga asiatica HOM05D007191 ORTHO05D009370 1.1e-58 231.1 334 41.9
PGSC0003DMG400016118 Solanum tuberosum HOM05D007191 ORTHO05D009370 1.2e-55 221.1 149 72.5
Os03g0685100 Oryza sativa ssp. japonica HOM05D007191 ORTHO05D009370 2.0e-55 220.3 291 44.7
HPP92_014152 Vanilla planifolia HOM05D007191 ORTHO05D009370 9.8e-55 218.0 272 47.1
HPP92_014172 Vanilla planifolia HOM05D007191 ORTHO05D009370 1.7e-54 217.2 286 46.5
AUR62043608 Chenopodium quinoa HOM05D007191 ORTHO05D009370 1.4e-53 214.2 160 66.9
ECA232G3284 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.0e-53 211.8 263 46.4
Pp3c5_6200 Physcomitrium patens HOM05D007191 ORTHO05D009370 4.0e-48 196.1 299 40.5
AUR62014153 Chenopodium quinoa HOM05D007191 ORTHO05D002709 3.4e-47 193.0 138 67.4
SMO364G0498 Selaginella moellendorffii HOM05D007191 ORTHO05D009370 2.2e-46 190.3 297 38.7
Zm00001eb053350 Zea mays HOM05D007191 ORTHO05D009370 6.3e-46 188.7 261 42.5
Mapoly0036s0111 Marchantia polymorpha HOM05D007191 ORTHO05D009370 3.6e-41 172.9 335 36.1
CBR_g31860 Chara braunii HOM05D000601 ORTHO05D000407 4.4e-39 166.0 290 36.2
MCO07G132 Micromonas commoda HOM05D007191 ORTHO05D009370 2.5e-34 150.2 272 35.7
Pp3c5_6210 Physcomitrium patens HOM05D007191 ORTHO05D009370 6.2e-33 145.6 226 38.9
SEGI_38116 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 1.5e-31 141.0 162 49.4
PGR102G1719 Punica granatum HOM05D007191 ORTHO05D009370 5.1e-27 125.9 275 35.3
Cc00_g34880 Coffea canephora HOM05D007191 ORTHO05D009370 1.6e-25 120.9 154 46.1
Cre17.g744947 Chlamydomonas reinhardtii HOM05D007191 ORTHO05D009370 1.4e-24 117.9 363 27.8
PRCOL_00003319 Prasinoderma coloniale HOM05D007191 ORTHO05D009370 3.4e-23 113.2 151 44.4
Cc07_g13860 Coffea canephora HOM05D007191 ORTHO05D009370 1.3e-22 111.3 132 48.5
Cc07_g13870 Coffea canephora HOM05D007191 ORTHO05D003232 3.0e-19 100.1 80 61.2
SEGI_29034 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 5.1e-11 72.8 125 37.6
CSS0007107 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 1.3e-09 68.2 61 60.7
CSS0022959 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 1.3e-09 68.2 61 60.7
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 3.6e-09 66.6 140 33.6
CsaV3_1G039790 Cucumis sativus L. HOM05D005801 ORTHO05D008555 2.0e-07 60.8 192 31.2
Eucgr.C00997 Eucalyptus grandis HOM05D005801 ORTHO05D008555 3.4e-07 60.1 197 30.5
Lsat_1_v5_gn_5_144900 Lactuca sativa HOM05D005801 ORTHO05D008555 4.4e-07 59.7 158 34.2


User provided reference genes

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