Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 1.5e-253 879.0 433 100.0
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 3.9e-137 492.3 433 55.9
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 2.9e-132 476.1 433 57.7
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 4.2e-131 472.2 429 55.2
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 4.6e-130 468.8 397 61.0
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 7.8e-130 468.0 433 54.5
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 2.5e-128 463.0 450 52.9
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 2.4e-126 456.4 433 54.3
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 1.2e-125 454.1 432 54.9
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 1.2e-125 454.1 488 50.0
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 8.7e-121 438.0 421 54.9
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 1.3e-119 434.1 432 52.1
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 1.2e-117 427.6 362 61.6
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 2.9e-116 422.9 432 50.5
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 2.9e-116 422.9 432 50.9
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 2.9e-116 422.9 431 52.9
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 2.5e-115 419.9 432 51.9
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 2.3e-113 413.3 434 51.2
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 1.1e-112 411.0 434 50.0
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 2.5e-112 409.8 434 48.6
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 2.5e-112 409.8 432 50.2
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 9.6e-112 407.9 433 51.0
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 2.1e-111 406.8 433 50.3
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 1.1e-110 404.4 399 52.4
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 1.2e-109 401.0 434 50.5
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 1.5e-109 400.6 431 48.3
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 2.0e-109 400.2 363 54.0
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 1.3e-108 397.5 432 48.4
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 5.0e-108 395.6 432 48.4
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 6.5e-108 395.2 390 51.8
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 8.4e-108 394.8 432 47.9
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.1e-107 394.4 390 51.5
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 1.1e-107 394.4 400 52.0
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 1.9e-107 393.7 431 49.4
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 3.2e-107 392.9 390 51.3
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 5.5e-107 392.1 432 47.5
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 9.3e-107 391.3 432 47.7
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 9.3e-107 391.3 436 46.6
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 1.6e-106 390.6 432 48.6
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 2.1e-106 390.2 432 47.7
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 3.5e-106 389.4 390 51.3
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.3e-105 387.5 395 50.6
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 2.3e-105 386.7 341 57.2
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 3.0e-105 386.3 432 48.4
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 1.5e-104 384.0 432 48.6
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 3.3e-104 382.9 462 45.9
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 2.8e-103 379.8 438 47.9
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 1.4e-102 377.5 428 47.9
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.8e-102 377.1 434 48.6
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 2.4e-102 376.7 430 46.5
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 1.3e-100 370.9 568 40.5
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 1.7e-100 370.5 398 50.5
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.9e-100 369.8 434 47.7
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 3.2e-99 366.3 423 47.5
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 4.2e-99 365.9 432 46.5
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.7e-98 363.2 401 49.6
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 3.6e-98 362.8 416 46.6
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 1.1e-96 357.8 462 42.2
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 2.0e-96 357.1 344 54.1
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 5.7e-96 355.5 437 43.9
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 5.7e-96 355.5 431 45.5
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 9.7e-96 354.8 434 43.1
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 1.7e-95 354.0 436 44.3
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 2.8e-95 353.2 437 44.4
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 3.7e-95 352.8 382 48.7
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 3.7e-95 352.8 412 46.4
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 8.2e-95 351.7 340 52.4
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 7.7e-93 345.1 413 45.3
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 7.7e-93 345.1 413 45.0
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 1.0e-92 344.7 423 44.4
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 1.3e-92 344.4 438 43.6
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 5.0e-92 342.4 435 44.1
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 1.9e-91 340.5 433 44.6
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 2.5e-91 340.1 413 44.6
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 2.5e-91 340.1 413 44.6
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 9.4e-91 338.2 413 43.8
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 9.4e-91 338.2 413 44.6
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 1.0e-89 334.7 415 44.6
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 8.8e-89 331.6 413 44.8
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.1e-88 331.3 341 49.9
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 2.6e-88 330.1 341 49.6
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 3.3e-88 329.7 413 43.3
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 4.1e-86 322.8 401 44.9
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 1.3e-84 317.8 343 48.7
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 1.1e-83 314.7 432 42.1
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 1.3e-79 301.2 297 52.5
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 8.2e-79 298.5 434 39.4
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 1.6e-77 294.3 323 47.7
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 6.5e-76 288.9 347 45.8
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 6.1e-74 282.3 447 37.4
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 1.2e-72 278.1 298 49.0
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 3.7e-71 273.1 232 56.0
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 4.8e-71 272.7 438 40.0
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 9.1e-70 268.5 333 42.6
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 2.3e-49 200.7 294 38.4
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 3.7e-47 193.4 170 62.4
CAN.G40.9 Capsicum annuum HOM05D006967 ORTHO05D008692 2.3e-44 184.1 207 46.9
Psat4g112640 Pisum sativum HOM05D006967 ORTHO05D008692 9.5e-43 178.7 185 49.2
Potri.001G073200 Populus trichocarpa HOM05D006967 ORTHO05D008692 1.5e-40 171.4 215 46.0
Ca_22538_v3 Cicer arietinum L. HOM05D006967 ORTHO05D008692 1.7e-39 167.9 287 36.6
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 2.7e-37 160.6 227 38.3
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 6.6e-36 156.0 476 28.6
HPP92_007230 Vanilla planifolia HOM05D006967 ORTHO05D008692 1.2e-21 108.6 178 36.0
CBR_g19989 Chara braunii HOM05D006967 ORTHO05D008692 6.9e-17 92.8 168 30.4
CBR_g19993 Chara braunii HOM05D006967 ORTHO05D008692 1.7e-15 88.2 160 30.0
Aqoxy4G01848 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 3.0e-12 77.4 104 41.3
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 8.1e-10 69.3 112 35.7
HPP92_007178 Vanilla planifolia HOM05D006967 ORTHO05D008692 1.2e-08 65.5 99 34.3
SMO365G0010 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 1.1e-06 58.9 138 31.9


User provided reference genes

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