Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 2.9e-69 265.0 123 100.0
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 3.4e-46 188.3 115 73.9
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 7.9e-43 177.2 116 71.6
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 7.9e-43 177.2 116 69.8
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 3.9e-42 174.9 121 65.3
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 8.7e-42 173.7 116 68.1
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 2.5e-41 172.2 116 68.1
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 5.6e-41 171.0 118 66.1
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 9.6e-41 170.2 117 70.1
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 4.8e-40 167.9 115 67.0
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 4.8e-40 167.9 117 65.8
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 6.2e-40 167.5 116 69.0
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 8.1e-40 167.2 115 67.8
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.1e-39 166.8 116 68.1
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 1.8e-39 166.0 115 65.2
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 1.8e-39 166.0 116 68.1
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 2.4e-39 165.6 84 81.0
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 2.4e-39 165.6 115 65.2
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 2.4e-39 165.6 120 65.8
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 2.4e-39 165.6 116 67.2
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 2.4e-39 165.6 116 65.5
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 3.1e-39 165.2 115 66.1
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 5.3e-39 164.5 116 68.1
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 5.3e-39 164.5 116 67.2
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 6.9e-39 164.1 118 65.3
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 6.9e-39 164.1 116 69.8
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 1.2e-38 163.3 116 66.4
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 1.2e-38 163.3 116 66.4
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 1.5e-38 162.9 117 66.7
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 1.5e-38 162.9 118 65.3
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 1.5e-38 162.9 85 78.8
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 2.0e-38 162.5 116 66.4
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 3.4e-38 161.8 118 64.4
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 3.4e-38 161.8 89 75.3
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 4.5e-38 161.4 102 67.6
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 9.9e-38 160.2 92 73.9
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 9.9e-38 160.2 116 62.1
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 9.9e-38 160.2 115 64.3
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 1.3e-37 159.8 118 63.6
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 1.7e-37 159.5 87 75.9
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 2.2e-37 159.1 116 64.7
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 2.2e-37 159.1 116 64.7
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 2.2e-37 159.1 116 64.7
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 2.9e-37 158.7 84 76.2
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 2.9e-37 158.7 116 64.7
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 2.9e-37 158.7 120 62.5
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 3.8e-37 158.3 79 81.0
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 3.8e-37 158.3 116 63.8
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 4.9e-37 157.9 85 75.3
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 6.4e-37 157.5 105 67.6
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 6.4e-37 157.5 116 64.7
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 6.4e-37 157.5 119 62.2
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 1.1e-36 156.8 85 75.3
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 1.4e-36 156.4 110 60.9
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 1.4e-36 156.4 115 65.2
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 1.4e-36 156.4 116 65.5
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 1.4e-36 156.4 119 60.5
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 3.2e-36 155.2 124 62.1
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 7.1e-36 154.1 117 61.5
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 7.1e-36 154.1 132 59.1
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 9.3e-36 153.7 116 64.7
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 1.2e-35 153.3 115 60.9
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 1.2e-35 153.3 115 60.9
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 1.2e-35 153.3 115 60.9
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 1.2e-35 153.3 115 60.9
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 1.2e-35 153.3 115 60.9
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 1.6e-35 152.9 118 57.6
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 2.1e-35 152.5 116 62.9
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 3.5e-35 151.8 147 50.3
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 4.6e-35 151.4 115 62.6
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 6.0e-35 151.0 115 58.3
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 1.0e-34 150.2 81 75.3
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 1.0e-34 150.2 126 58.7
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 1.3e-34 149.8 116 58.6
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.3e-34 149.8 88 71.6
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 3.0e-34 148.7 116 59.5
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 6.7e-34 147.5 88 70.5
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 6.7e-34 147.5 78 75.6
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 8.7e-34 147.1 99 67.7
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 8.7e-34 147.1 115 57.4
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 1.5e-33 146.4 115 58.3
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 4.3e-33 144.8 93 71.0
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 5.6e-33 144.4 115 57.4
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 5.6e-33 144.4 115 57.4
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 1.3e-32 143.3 76 76.3
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 4.8e-32 141.4 83 69.9
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 6.2e-32 141.0 115 60.9
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 1.1e-31 140.2 115 54.8
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 1.1e-31 140.2 121 52.9
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 2.4e-31 139.0 115 53.9
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 3.1e-31 138.7 88 64.8
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 4.0e-31 138.3 106 57.5
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 5.3e-31 137.9 88 64.8
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 6.9e-31 137.5 94 57.4
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 1.5e-30 136.3 80 66.2
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 2.6e-30 135.6 115 52.2
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 5.8e-30 134.4 115 55.7
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 5.8e-30 134.4 65 84.6
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 5.8e-30 134.4 133 51.9
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 2.2e-29 132.5 134 51.5
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 6.5e-29 131.0 107 61.7
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 1.6e-27 126.3 100 62.0
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 1.6e-27 126.3 100 62.0
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.0e-26 123.6 88 62.5
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 1.3e-26 123.2 118 52.5
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.8e-26 122.9 99 63.6
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 1.8e-26 122.9 84 67.9
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 8.7e-26 120.6 97 58.8
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 1.1e-25 120.2 117 53.0
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 1.5e-25 119.8 108 59.3
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 7.4e-25 117.5 88 60.2
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 1.3e-24 116.7 93 61.3
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 2.4e-23 112.5 78 65.4
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 9.0e-23 110.5 52 86.5
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 2.0e-22 109.4 52 86.5
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 6.1e-19 97.8 68 63.2
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 2.3e-18 95.9 64 68.8
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 8.8e-18 94.0 75 50.7
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 8.8e-18 94.0 97 45.4
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 4.7e-11 71.6 43 69.8
PGSC0003DMG400022813 Solanum tuberosum HOM05D006296 ORTHO05D007777 1.4e-10 70.1 64 57.8
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 3.9e-10 68.6 66 48.5
CSS0025334 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 6.7e-10 67.8 66 51.5
MBI18_g17001_MAGBIO Magnolia biondii HOM05D006296 ORTHO05D007777 1.1e-07 60.5 32 75.0


User provided reference genes

Program Settings