Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1030T58 Lonicera japonica HOM05D005643 ORTHO05D006819 6.4e-38 160.2 79 100.0
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 1.4e-21 105.9 73 76.7
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 9.3e-21 103.2 78 66.7
Dinv12496 Davidia involucrata HOM05D005643 ORTHO05D006819 1.6e-20 102.4 71 77.5
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 7.8e-20 100.1 70 71.4
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 1.0e-19 99.8 78 67.9
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 3.9e-19 97.8 71 71.8
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 3.9e-19 97.8 76 68.4
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 5.1e-19 97.4 69 71.0
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 5.1e-19 97.4 76 67.1
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 5.1e-19 97.4 76 67.1
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 8.7e-19 96.7 73 68.5
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 8.7e-19 96.7 75 66.7
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 1.5e-18 95.9 73 65.8
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 1.5e-18 95.9 70 67.1
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 2.5e-18 95.1 73 67.1
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 2.5e-18 95.1 71 69.0
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 2.5e-18 95.1 72 68.1
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 4.3e-18 94.4 72 66.7
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 4.3e-18 94.4 72 65.3
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 5.6e-18 94.0 70 65.7
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 5.6e-18 94.0 72 61.1
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 5.6e-18 94.0 78 64.1
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 9.6e-18 93.2 71 66.2
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 1.6e-17 92.4 76 64.5
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 1.6e-17 92.4 70 65.7
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 1.6e-17 92.4 72 65.3
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 1.6e-17 92.4 72 65.3
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 2.1e-17 92.0 72 63.9
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 2.1e-17 92.0 70 62.9
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 2.1e-17 92.0 72 62.5
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 2.8e-17 91.7 77 61.0
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 2.8e-17 91.7 69 65.2
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 2.8e-17 91.7 70 65.7
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 3.6e-17 91.3 79 57.0
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 3.6e-17 91.3 73 61.6
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 4.8e-17 90.9 70 58.6
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 6.2e-17 90.5 73 65.8
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 6.2e-17 90.5 70 61.4
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 6.2e-17 90.5 72 59.7
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 6.2e-17 90.5 77 64.9
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 8.1e-17 90.1 69 63.8
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 1.1e-16 89.7 74 66.2
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 1.1e-16 89.7 74 66.2
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.1e-16 89.7 71 67.6
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 1.4e-16 89.4 69 68.1
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 1.4e-16 89.4 72 63.9
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 1.8e-16 89.0 73 58.9
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 1.8e-16 89.0 71 60.6
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 2.4e-16 88.6 72 62.5
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 3.1e-16 88.2 73 60.3
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 3.1e-16 88.2 71 69.0
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 4.0e-16 87.8 69 66.7
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 4.0e-16 87.8 69 60.9
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 4.0e-16 87.8 69 60.9
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 4.0e-16 87.8 69 60.9
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 4.0e-16 87.8 72 62.5
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 9.0e-16 86.7 72 56.9
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 1.2e-15 86.3 79 54.4
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 1.5e-15 85.9 71 60.6
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 1.5e-15 85.9 73 57.5
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 2.0e-15 85.5 69 59.4
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 2.6e-15 85.1 67 70.1
Cpa.g.sc216.18 Carica papaya HOM05D005643 ORTHO05D006819 4.5e-15 84.3 70 65.7
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 7.6e-15 83.6 72 62.5
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 7.6e-15 83.6 72 54.2
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 9.9e-15 83.2 71 56.3
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 9.9e-15 83.2 70 65.7
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 1.3e-14 82.8 65 61.5
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 1.7e-14 82.4 72 61.1
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 1.7e-14 82.4 72 55.6
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 1.7e-14 82.4 71 54.9
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 1.7e-14 82.4 71 57.7
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 2.9e-14 81.6 74 55.4
TAR636G0837 Trochodendron aralioides HOM05D005643 ORTHO05D006819 2.9e-14 81.6 72 65.3
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 2.9e-14 81.6 76 50.0
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 3.8e-14 81.3 64 59.4
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 3.8e-14 81.3 64 59.4
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 3.8e-14 81.3 70 54.3
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 3.8e-14 81.3 71 60.6
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 3.8e-14 81.3 76 57.9
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 4.9e-14 80.9 72 58.3
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 4.9e-14 80.9 75 53.3
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 6.4e-14 80.5 70 57.1
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 6.4e-14 80.5 72 55.6
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 6.4e-14 80.5 69 58.0
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 8.4e-14 80.1 70 54.3
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 8.4e-14 80.1 72 61.1
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 8.4e-14 80.1 72 58.3
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 1.9e-13 79.0 73 58.9
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 1.9e-13 79.0 74 62.2
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 3.2e-13 78.2 73 58.9
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 3.2e-13 78.2 73 58.9
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 3.2e-13 78.2 73 58.9
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 3.2e-13 78.2 73 58.9
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 3.2e-13 78.2 66 60.6
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 4.2e-13 77.8 69 56.5
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 4.2e-13 77.8 69 56.5
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 7.1e-13 77.0 73 58.9
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 9.3e-13 76.6 69 55.1
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 1.6e-12 75.9 73 57.5
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 1.6e-12 75.9 71 57.7
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 2.7e-12 75.1 73 56.2
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 4.6e-12 74.3 47 78.7
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 4.6e-12 74.3 80 48.8
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 1.3e-11 72.8 69 50.7
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 1.3e-11 72.8 74 54.1
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 1.8e-11 72.4 73 54.8
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 2.3e-11 72.0 46 78.3
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 8.7e-11 70.1 84 46.4
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 1.5e-10 69.3 77 48.1
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 2.5e-10 68.6 77 46.8
Rhsim13G0093600 Rhododendron simsii HOM05D000699 ORTHO05D000519 5.6e-10 67.4 45 75.6
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 7.4e-10 67.0 74 47.3
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 1.3e-09 66.2 44 72.7
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 2.8e-09 65.1 68 51.5
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 3.7e-09 64.7 40 75.0
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 2.6e-07 58.5 36 72.2
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 2.6e-07 58.5 37 75.7
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 7.6e-07 57.0 40 62.5
TAR005G0002 Trochodendron aralioides HOM05D005643 ORTHO05D006819 2.2e-06 55.5 67 49.3
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 3.8e-06 54.7 37 59.5


User provided reference genes

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