Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0019371 Lotus japonicus HOM05D006707 ORTHO05D008243 1.1e-111 408.3 257 100.0
Psat3g124000 Pisum sativum HOM05D006707 ORTHO05D008243 5.7e-76 289.7 251 78.5
TPR.G37093 Trifolium pratense HOM05D006707 ORTHO05D008243 2.0e-73 281.2 243 79.0
Ca_07699_v3 Cicer arietinum L. HOM05D006707 ORTHO05D000099 1.7e-72 278.1 222 84.2
TPR.G35815 Trifolium pratense HOM05D006707 ORTHO05D008243 1.9e-71 274.6 254 77.6
Medtr7g070420 Medicago truncatula HOM05D006707 ORTHO05D008243 1.0e-69 268.9 257 74.3
Glyma.18G207800 Glycine max HOM05D006707 ORTHO05D008243 6.3e-67 259.6 259 74.5
Phvul.010G093200 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 2.0e-60 238.0 224 76.3
VMungo1383G0390 Vigna mungo HOM05D006707 ORTHO05D008243 2.6e-60 237.7 244 73.8
arahy.Tifrunner.gnm1.ann1.72MQAV Arachis hypogaea HOM05D000449 ORTHO05D008243 2.2e-56 224.6 264 66.3
arahy.Tifrunner.gnm1.ann1.U18B68 Arachis hypogaea HOM05D000449 ORTHO05D008243 1.8e-53 214.9 260 66.2
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 1.3e-51 208.8 258 65.1
QL11p013929 Quercus lobata HOM05D006707 ORTHO05D008243 1.3e-51 208.8 222 63.1
QL11p014448 Quercus lobata HOM05D006707 ORTHO05D008243 6.3e-51 206.5 222 63.1
Dinv07298 Davidia involucrata HOM05D006707 ORTHO05D008243 1.1e-50 205.7 219 69.9
Dinv27614 Davidia involucrata HOM05D006707 ORTHO05D008243 1.1e-50 205.7 219 69.9
GSVIVG01016661001 Vitis vinifera HOM05D006707 ORTHO05D008243 2.4e-50 204.5 221 68.3
Cfa019000 Carpinus fangiana HOM05D006707 ORTHO05D008243 5.9e-49 199.9 221 68.8
Lalb_Chr04g0260761 Lupinus albus HOM05D006707 ORTHO05D008243 7.7e-49 199.5 261 61.3
TAR622G1063 Trochodendron aralioides HOM05D006707 ORTHO05D008243 1.7e-48 198.4 216 70.8
Nn4g24204 Nelumbo nucifera HOM05D006707 ORTHO05D008243 1.9e-47 194.9 219 69.4
Lj5P156T67 Lonicera japonica HOM05D006707 ORTHO05D008243 1.4e-45 188.7 219 63.9
Rhsim03G0042300 Rhododendron simsii HOM05D006707 ORTHO05D008243 2.3e-45 188.0 216 66.2
Haze_21123 Corylus avellana HOM05D006707 ORTHO05D008243 1.2e-44 185.7 221 66.5
MD06G1231100 Malus domestica HOM05D006707 ORTHO05D008243 1.2e-44 185.7 221 64.7
RhsimUnG0220600 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.2e-44 185.7 216 65.7
RhsimUnG0239000 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.2e-44 185.7 216 65.7
Lj5A157G52 Lonicera japonica HOM05D006707 ORTHO05D008243 7.5e-44 183.0 216 63.9
CANSAT11G1044 Cannabis sativa HOM05D006707 ORTHO05D008243 1.3e-43 182.2 219 65.3
Sed0000825 Sechium edule HOM05D006707 ORTHO05D008243 1.3e-43 182.2 221 63.8
Prupe.5G232400 Prunus persica HOM05D006707 ORTHO05D008243 1.7e-43 181.8 216 66.2
EL10Ac3g06722 Beta vulgaris HOM05D006707 ORTHO05D008243 2.2e-43 181.4 219 65.8
FvH4_5g17250 Fragaria vesca HOM05D006707 ORTHO05D008243 2.2e-43 181.4 221 63.8
FAN18G2052 Fragaria x ananassa HOM05D006707 ORTHO05D008243 2.2e-43 181.4 221 63.8
ClCG06G014360 Citrullus lanatus HOM05D006707 ORTHO05D008243 8.3e-43 179.5 219 66.7
CsaV3_1G004300 Cucumis sativus L. HOM05D006707 ORTHO05D008243 1.1e-42 179.1 216 67.1
Actinidia25143 Actinidia chinensis HOM05D006707 ORTHO05D008243 4.1e-42 177.2 219 63.0
Sabra15G0038500 Salix brachista HOM05D006707 ORTHO05D008243 4.1e-42 177.2 216 66.7
Potri.015G039300 Populus trichocarpa HOM05D006707 ORTHO05D008243 5.3e-42 176.8 219 65.8
FAN08G3326 Fragaria x ananassa HOM05D006707 ORTHO05D008243 9.1e-42 176.0 220 63.2
Sabra15G0070700 Salix brachista HOM05D006707 ORTHO05D008243 1.2e-41 175.6 216 66.2
Thecc.03G054200 Theobroma cacao HOM05D006707 ORTHO05D008243 1.6e-41 175.3 217 57.1
TWI81G0630 Tripterygium wilfordii HOM05D006707 ORTHO05D008243 2.0e-41 174.9 206 68.0
AUR62035893 Chenopodium quinoa HOM05D006707 ORTHO05D008243 4.5e-41 173.7 256 57.0
AUR62035349 Chenopodium quinoa HOM05D006707 ORTHO05D008243 5.9e-41 173.3 254 58.3
Sabra15G0069900 Salix brachista HOM05D006707 ORTHO05D008243 1.0e-40 172.6 216 65.3
Sc10g0004790 Simmondsia chinensis HOM05D006707 ORTHO05D008243 1.0e-40 172.6 219 63.0
Sabra15G0057600 Salix brachista HOM05D006707 ORTHO05D008243 1.3e-40 172.2 216 65.3
Aqoxy3G00090 Aquilegia oxysepala HOM05D006707 ORTHO05D008243 3.8e-40 170.6 250 58.8
Nitab4.5_0003968g0010 Nicotiana tabacum HOM05D006707 ORTHO05D008243 5.0e-40 170.2 222 62.6
RcHm_v2.0_Chr7g0178541 Rosa chinensis HOM05D006707 ORTHO05D008243 5.0e-40 170.2 221 62.4
CAN.G1129.54 Capsicum annuum HOM05D006707 ORTHO05D008243 6.5e-40 169.9 222 62.6
COL.COLO4_35387 Corchorus olitorius HOM05D006707 ORTHO05D008243 6.5e-40 169.9 217 57.6
Manes.06G007500 Manihot esculenta HOM05D006707 ORTHO05D008243 1.1e-39 169.1 219 60.7
Nitab4.5_0001456g0170 Nicotiana tabacum HOM05D006707 ORTHO05D008243 1.5e-39 168.7 222 61.7
Atru.BG.186.p Acer truncatum HOM05D006707 ORTHO05D008243 2.5e-39 167.9 218 64.7
Oeu010709.1 Olea europaea HOM05D006707 ORTHO05D008243 1.6e-38 165.2 221 57.9
CiPaw.15G142400 Carya illinoinensis HOM05D006707 ORTHO05D008243 3.6e-38 164.1 221 62.4
Solyc03g118790.3 Solanum lycopersicum HOM05D006707 ORTHO05D008243 3.6e-38 164.1 222 59.0
Duzib205G0649 Durio zibethinus HOM05D006707 ORTHO05D008243 1.0e-37 162.5 220 53.6
PGSC0003DMG400005747 Solanum tuberosum HOM05D006707 ORTHO05D008243 1.4e-37 162.2 222 57.7
MSTRG.16972 Avicennia marina HOM05D006707 ORTHO05D008243 1.8e-37 161.8 221 60.6
Cpa.g.sc3.405 Carica papaya HOM05D006707 ORTHO05D008243 2.3e-37 161.4 210 56.7
Sopen03g037740 Solanum pennellii HOM05D006707 ORTHO05D008243 2.3e-37 161.4 222 58.1
AT3G18020 Arabidopsis thaliana HOM05D006707 ORTHO05D008243 4.0e-37 160.6 220 59.1
AL3G31170 Arabidopsis lyrata HOM05D006707 ORTHO05D008243 1.2e-36 159.1 220 59.1
HPP92_007817 Vanilla planifolia HOM05D006707 ORTHO05D008243 2.0e-36 158.3 221 44.3
SalBow6G7169 Salvia bowleyana HOM05D006707 ORTHO05D008243 3.4e-36 157.5 220 58.2
Ah.04g153500 Amaranthus hybridus HOM05D006707 ORTHO05D008243 5.7e-36 156.8 219 61.2
CARHR093330 Cardamine hirsuta HOM05D006707 ORTHO05D008243 1.3e-35 155.6 220 58.6
Peaxi162Scf00683g00048 Petunia axillaris HOM05D006707 ORTHO05D008243 1.3e-35 155.6 223 58.3
Thhalv10020183m.g Eutrema salsugineum HOM05D006707 ORTHO05D008243 1.7e-35 155.2 220 57.7
PSO478G5041 Papaver somniferum HOM05D006707 ORTHO05D008243 2.8e-35 154.5 217 61.8
PGR044G0521 Punica granatum HOM05D006707 ORTHO05D008243 2.8e-35 154.5 218 63.3
Migut.I00309 Erythranthe guttata HOM05D006707 ORTHO05D008243 8.3e-35 152.9 221 59.3
Aa31LG8G4870 Aethionema arabicum HOM05D006707 ORTHO05D008243 4.1e-34 150.6 219 58.4
Sp3g16130 Schrenkiella parvula HOM05D006707 ORTHO05D008243 5.4e-34 150.2 220 59.1
Carub.0003s1773 Capsella rubella HOM05D006707 ORTHO05D008243 9.1e-34 149.4 220 58.2
THA.LOC104820351 Tarenaya hassleriana HOM05D006707 ORTHO05D008243 9.1e-34 149.4 255 53.7
C05p48280 Brassica napus HOM05D006707 ORTHO05D008243 1.6e-33 148.7 220 58.6
A05p31810 Brassica napus HOM05D006707 ORTHO05D008243 2.7e-33 147.9 220 58.2
BraA05t22012Z Brassica rapa HOM05D006707 ORTHO05D008243 2.7e-33 147.9 220 58.2
Eucgr.K02270 Eucalyptus grandis HOM05D006707 ORTHO05D008243 2.7e-33 147.9 224 58.5
Hund22248 Selenicereus undatus HOM05D006707 ORTHO05D008243 2.7e-33 147.9 221 58.4
BcaB06g25867 Brassica carinata HOM05D006707 ORTHO05D008243 7.7e-33 146.4 220 58.2
BcaC05g28725 Brassica carinata HOM05D006707 ORTHO05D008243 6.6e-32 143.3 220 57.3
BolC5t33562H Brassica oleracea HOM05D006707 ORTHO05D008243 6.6e-32 143.3 220 57.3
DCAR_014733 Daucus carota HOM05D006707 ORTHO05D008243 6.6e-32 143.3 209 60.3
Cc04_g06350 Coffea canephora HOM05D006707 ORTHO05D008243 3.3e-31 141.0 217 57.6
SGA_v2.0_scaffold192G40603 Striga asiatica HOM05D006707 ORTHO05D008243 1.8e-29 135.2 207 58.5
ATR0564G450 Amborella trichopoda HOM05D006707 ORTHO05D008243 2.8e-27 127.9 219 56.2
Lsat_1_v5_gn_6_99620 Lactuca sativa HOM05D006707 ORTHO05D008243 3.7e-27 127.5 220 55.5
HanXRQChr10g0279071 Helianthus annuus HOM05D006707 ORTHO05D008243 3.5e-25 120.9 227 52.9
vmacro07812 Vaccinium macrocarpon HOM05D006707 ORTHO05D008243 4.6e-25 120.6 219 34.2
arahy.Tifrunner.gnm1.ann1.55ENF0 Arachis hypogaea HOM05D006707 ORTHO05D008243 6.1e-22 110.2 140 43.6
PSO017G3187 Papaver somniferum HOM05D006707 ORTHO05D008243 3.4e-20 104.4 103 50.5
SEGI_24072 Sequoiadendron giganteum HOM05D006707 ORTHO05D008243 3.7e-19 100.9 192 55.2
CDE07G1516 Ceratophyllum demersum HOM05D006707 ORTHO05D008243 1.9e-18 98.6 219 52.1
Haze_18837 Corylus avellana HOM05D006707 ORTHO05D008243 2.0e-17 95.1 94 51.1
Phvul.008G091500 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 9.5e-15 86.3 71 64.8
Ciclev10024364m.g Citrus clementina HOM05D006707 ORTHO05D008243 2.3e-13 81.6 70 60.0
Zm00001eb111370 Zea mays HOM05D006707 ORTHO05D008243 4.4e-12 77.4 228 30.3
Os07g0674300 Oryza sativa ssp. japonica HOM05D006707 ORTHO05D008243 2.9e-11 74.7 248 31.0
CSS0017365 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 3.5e-09 67.8 61 57.4
CSS0026236 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 3.5e-09 67.8 61 57.4
arahy.Tifrunner.gnm1.ann1.1F7K7B Arachis hypogaea HOM05D006707 ORTHO05D008243 4.6e-09 67.4 41 78.0
ECA246G2801 Erigeron canadensis HOM05D006707 ORTHO05D008243 6.0e-09 67.0 70 45.7
HanXRQChr10g0277831 Helianthus annuus HOM05D006707 ORTHO05D008243 4.3e-07 60.8 153 28.1
Rhsim03G0043000 Rhododendron simsii HOM05D006707 ORTHO05D008243 4.3e-07 60.8 57 50.9
PSO017G4261 Papaver somniferum HOM05D006707 ORTHO05D008243 3.6e-06 57.8 43 62.8


User provided reference genes

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