Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0017363 Lotus japonicus HOM05D004729 ORTHO05D005451 6.0e-208 727.2 363 100.0
Medtr3g073010 Medicago truncatula HOM05D004729 ORTHO05D005451 1.5e-174 616.3 361 84.2
VMungo1309G0261 Vigna mungo HOM05D004729 ORTHO05D005451 9.1e-172 607.1 361 83.9
Phvul.009G121400 Phaseolus vulgaris HOM05D004729 ORTHO05D005451 9.4e-169 597.0 361 82.8
Psat5g133600 Pisum sativum HOM05D004729 ORTHO05D005451 2.7e-168 595.5 363 82.6
Glyma.04G252900 Glycine max HOM05D004729 ORTHO05D005451 1.8e-167 592.8 362 82.0
Glyma.06G109600 Glycine max HOM05D004729 ORTHO05D005451 5.2e-167 591.3 362 81.5
arahy.Tifrunner.gnm1.ann1.CLQ5CM Arachis hypogaea HOM05D004729 ORTHO05D005451 7.7e-163 577.4 358 80.4
arahy.Tifrunner.gnm1.ann1.J2YLH9 Arachis hypogaea HOM05D004729 ORTHO05D005451 1.4e-159 566.6 377 76.1
Lalb_Chr23g0270821 Lupinus albus HOM05D004729 ORTHO05D005451 5.7e-158 561.2 364 78.3
Prupe.1G503900 Prunus persica HOM05D004729 ORTHO05D005451 3.7e-149 531.9 321 78.8
MD15G1356700 Malus domestica HOM05D004729 ORTHO05D005451 3.8e-146 521.9 333 75.4
Potri.005G173000 Populus trichocarpa HOM05D004729 ORTHO05D005451 5.0e-146 521.5 331 76.4
Potri.002G087700 Populus trichocarpa HOM05D004729 ORTHO05D005451 6.5e-146 521.2 339 75.5
Dinv07919 Davidia involucrata HOM05D004729 ORTHO05D005451 7.2e-145 517.7 339 74.0
MD08G1169900 Malus domestica HOM05D004729 ORTHO05D005451 1.2e-144 516.9 344 72.4
RcHm_v2.0_Chr6g0294871 Rosa chinensis HOM05D004729 ORTHO05D005451 1.6e-144 516.5 338 73.7
GSVIVG01008929001 Vitis vinifera HOM05D004729 ORTHO05D005451 8.0e-144 514.2 343 74.1
FvH4_2g26260 Fragaria vesca HOM05D004729 ORTHO05D005451 1.8e-143 513.1 331 74.6
Gohir.D05G234700 Gossypium hirsutum HOM05D004729 ORTHO05D005451 1.8e-143 513.1 334 74.3
Ciclev10001583m.g Citrus clementina HOM05D004729 ORTHO05D005451 2.3e-143 512.7 339 72.9
CiPaw.05G227200 Carya illinoinensis HOM05D004729 ORTHO05D005451 4.0e-143 511.9 372 69.1
Thecc.08G118600 Theobroma cacao HOM05D004729 ORTHO05D005451 5.2e-143 511.5 340 72.6
Duzib116G0142 Durio zibethinus HOM05D004729 ORTHO05D005451 8.9e-143 510.8 325 74.8
Gohir.A05G236400 Gossypium hirsutum HOM05D004729 ORTHO05D005451 7.5e-142 507.7 334 74.0
CSS0005799 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 3.7e-141 505.4 339 72.0
Eucgr.F03750 Eucalyptus grandis HOM05D004729 ORTHO05D005451 4.9e-141 505.0 335 71.9
TWI56G0049 Tripterygium wilfordii HOM05D004729 ORTHO05D005451 6.3e-141 504.6 349 70.5
TAR628G0451 Trochodendron aralioides HOM05D004729 ORTHO05D005451 1.8e-140 503.1 338 71.3
CSS0018062 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 4.1e-140 501.9 332 72.3
THA.LOC104817066 Tarenaya hassleriana HOM05D004729 ORTHO05D005451 1.6e-139 500.0 366 67.5
Manes.02G159900 Manihot esculenta HOM05D004729 ORTHO05D005451 1.1e-137 493.8 365 68.5
FAN15G1542 Fragaria x ananassa HOM05D004729 ORTHO05D005451 1.9e-137 493.0 325 73.5
CANSAT78G0882 Cannabis sativa HOM05D004729 ORTHO05D005451 2.5e-137 492.7 362 67.4
PGR042G2886 Punica granatum HOM05D004729 ORTHO05D005451 5.6e-137 491.5 345 70.7
Duzib093G1993 Durio zibethinus HOM05D004729 ORTHO05D005451 7.3e-137 491.1 322 73.6
FAN27G3155 Fragaria x ananassa HOM05D004729 ORTHO05D005451 1.2e-136 490.3 325 72.9
Gorai.009G243000 Gossypium raimondii HOM05D004729 ORTHO05D005451 6.1e-136 488.0 325 72.3
TAR151G0002 Trochodendron aralioides HOM05D004729 ORTHO05D005451 1.4e-135 486.9 322 72.4
Actinidia23053 Actinidia chinensis HOM05D004729 ORTHO05D005451 2.3e-135 486.1 325 72.0
Cpa.g.sc36.9 Carica papaya HOM05D004729 ORTHO05D005451 4.0e-135 485.3 321 70.1
FAN24G1570 Fragaria x ananassa HOM05D004729 ORTHO05D005451 5.2e-135 485.0 350 68.6
MELO3C012993.2 Cucumis melo HOM05D004729 ORTHO05D005451 2.0e-134 483.0 338 67.8
CsaV3_3G023700 Cucumis sativus L. HOM05D004729 ORTHO05D005451 7.5e-134 481.1 326 69.3
Migut.C01178 Erythranthe guttata HOM05D004729 ORTHO05D005451 1.1e-132 477.2 355 66.2
Sp1g31520 Schrenkiella parvula HOM05D004729 ORTHO05D005451 1.8e-132 476.5 324 68.5
Cc10_g10550 Coffea canephora HOM05D004729 ORTHO05D005451 3.2e-132 475.7 353 67.1
Thhalv10027838m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 7.0e-132 474.6 324 68.2
SGA_v2.0_scaffold52G19009 Striga asiatica HOM05D004729 ORTHO05D005451 2.0e-131 473.0 328 70.4
BcaB05g24351 Brassica carinata HOM05D004729 ORTHO05D005451 3.5e-131 472.2 336 66.4
BraA02t06545Z Brassica rapa HOM05D004729 ORTHO05D005451 3.0e-130 469.2 337 66.2
A02p14780 Brassica napus HOM05D004729 ORTHO05D005451 3.9e-130 468.8 337 66.2
TPR.G22343 Trifolium pratense HOM05D004729 ORTHO05D005451 8.6e-130 467.6 286 82.2
MSTRG.25403 Avicennia marina HOM05D004729 ORTHO05D005451 1.5e-129 466.8 345 66.1
AL1G51210 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 1.9e-129 466.5 359 63.8
CARHR115540 Cardamine hirsuta HOM05D004729 ORTHO05D005451 1.9e-129 466.5 329 66.6
BcaC03g14925 Brassica carinata HOM05D004729 ORTHO05D005451 5.6e-129 464.9 336 66.4
C02p24210 Brassica napus HOM05D004729 ORTHO05D005451 9.5e-129 464.2 337 66.2
Carub.0004s0549 Capsella rubella HOM05D004729 ORTHO05D005451 9.5e-129 464.2 332 67.8
BolC2t08529H Brassica oleracea HOM05D004729 ORTHO05D005451 1.6e-128 463.4 337 65.9
Nn1g08655 Nelumbo nucifera HOM05D004729 ORTHO05D005451 2.1e-128 463.0 336 67.3
AL4G17320 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 3.1e-127 459.1 321 68.2
Carub.0004s0560 Capsella rubella HOM05D004729 ORTHO05D005451 3.1e-127 459.1 328 66.2
Aa31LG7G12040 Aethionema arabicum HOM05D004729 ORTHO05D005451 3.7e-125 452.2 348 63.5
Haze_00501 Corylus avellana HOM05D004729 ORTHO05D005451 1.4e-124 450.3 359 63.8
Hund27047 Selenicereus undatus HOM05D004729 ORTHO05D005451 1.9e-124 449.9 342 66.7
Sc23g0000860 Simmondsia chinensis HOM05D004729 ORTHO05D005451 9.2e-124 447.6 310 69.0
DCAR_024544 Daucus carota HOM05D004729 ORTHO05D005451 4.6e-123 445.3 313 68.7
PSO528G0069 Papaver somniferum HOM05D004729 ORTHO05D005451 6.0e-123 444.9 333 64.3
SGA_v2.0_scaffold24G10496 Striga asiatica HOM05D004729 ORTHO05D005451 7.8e-123 444.5 312 67.6
C09p08700 Brassica napus HOM05D004729 ORTHO05D005451 1.0e-122 444.1 326 64.4
PSO170G2478 Papaver somniferum HOM05D004729 ORTHO05D005451 1.3e-122 443.7 333 63.7
Sed0026543 Sechium edule HOM05D004729 ORTHO05D005451 3.0e-122 442.6 385 57.9
DCAR_024606 Daucus carota HOM05D004729 ORTHO05D005451 3.9e-122 442.2 311 68.5
SalBow7G0963 Salvia bowleyana HOM05D004729 ORTHO05D005451 8.6e-122 441.0 318 67.9
ECA236G4997 Erigeron canadensis HOM05D004729 ORTHO05D005451 4.3e-121 438.7 323 66.9
Solyc11g013200.2 Solanum lycopersicum HOM05D004729 ORTHO05D005451 5.6e-121 438.3 336 63.4
Lsat_1_v5_gn_8_107920 Lactuca sativa HOM05D004729 ORTHO05D005451 3.6e-120 435.6 344 63.7
Sopen11g008240 Solanum pennellii HOM05D004729 ORTHO05D005451 8.1e-120 434.5 334 63.2
Ah.05g172360 Amaranthus hybridus HOM05D004729 ORTHO05D005451 1.1e-119 434.1 331 63.7
Aqoxy5G04147 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 1.8e-119 433.3 331 64.0
BcaC04g23401 Brassica carinata HOM05D004729 ORTHO05D005451 2.3e-119 433.0 337 61.4
BolC9t53782H Brassica oleracea HOM05D004729 ORTHO05D005451 3.1e-119 432.6 340 61.5
Nitab4.5_0000494g0050 Nicotiana tabacum HOM05D004729 ORTHO05D005451 3.1e-119 432.6 327 65.1
HanXRQChr06g0181001 Helianthus annuus HOM05D004729 ORTHO05D005451 4.0e-119 432.2 355 61.4
MBI06_g01065_MAGBIO Magnolia biondii HOM05D004729 ORTHO05D005451 6.8e-119 431.4 332 63.0
Aqoxy1G01637 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 8.9e-119 431.0 331 64.0
CAN.G321.55 Capsicum annuum HOM05D004729 ORTHO05D005451 4.9e-117 425.2 341 61.9
Peaxi162Scf00679g00006 Petunia axillaris HOM05D004729 ORTHO05D005451 1.4e-116 423.7 337 61.7
ATR0684G041 Amborella trichopoda HOM05D004729 ORTHO05D005451 1.6e-115 420.2 313 64.9
CDE08G0072 Ceratophyllum demersum HOM05D004729 ORTHO05D005451 2.7e-115 419.5 322 62.7
CAN.G630.60 Capsicum annuum HOM05D004729 ORTHO05D005451 1.7e-114 416.8 337 62.0
Lj4C592G4 Lonicera japonica HOM05D004729 ORTHO05D005451 2.3e-114 416.4 286 69.9
QL09p035890 Quercus lobata HOM05D004729 ORTHO05D005451 6.6e-114 414.8 591 43.0
Oeu017724.4 Olea europaea HOM05D004729 ORTHO05D005451 4.3e-113 412.1 324 63.3
ClCG11G010630 Citrullus lanatus HOM05D004729 ORTHO05D005451 5.6e-113 411.8 336 60.4
HPP92_002257 Vanilla planifolia HOM05D004729 ORTHO05D005451 1.6e-112 410.2 328 61.9
Atru.chr13.1337 Acer truncatum HOM05D004729 ORTHO05D005451 6.2e-112 408.3 263 74.1
Atru.chr13.1380 Acer truncatum HOM05D004729 ORTHO05D005451 6.2e-112 408.3 263 74.1
AUR62023623 Chenopodium quinoa HOM05D004729 ORTHO05D005451 1.1e-111 407.5 266 71.8
FAN18G3003 Fragaria x ananassa HOM05D004729 ORTHO05D005451 2.0e-110 403.3 317 63.1
COL.COLO4_38234 Corchorus olitorius HOM05D004729 ORTHO05D005451 1.3e-109 400.6 286 69.2
Lsat_1_v5_gn_3_63181 Lactuca sativa HOM05D004729 ORTHO05D005451 1.3e-106 390.6 312 60.3
AT1G37150 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 3.0e-106 389.4 286 63.6
Hma1.2p1_0542F.1_g174920 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 3.9e-106 389.0 260 71.5
Oeu032968.2 Olea europaea HOM05D004729 ORTHO05D005451 2.5e-105 386.3 260 69.2
unitig_46.g18427 Utricularia gibba HOM05D004729 ORTHO05D005451 9.6e-105 384.4 326 58.9
Lj3g0025484 Lotus japonicus HOM05D004729 ORTHO05D005451 3.6e-104 382.5 197 93.4
Os02g0167000 Oryza sativa ssp. japonica HOM05D004729 ORTHO05D005451 1.5e-102 377.1 272 64.0
Thhalv10004827m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 4.4e-102 375.6 238 70.2
AT2G25710 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 2.2e-101 373.2 278 64.7
Zm00001eb232860 Zea mays HOM05D004729 ORTHO05D005451 8.4e-101 371.3 330 55.8
SHI32261 Sapria himalayana HOM05D004729 ORTHO05D005451 5.4e-100 368.6 323 56.3
Peaxi162Scf00412g00069 Petunia axillaris HOM05D004729 ORTHO05D005451 8.7e-98 361.3 298 59.4
AUR62029101 Chenopodium quinoa HOM05D004729 ORTHO05D005451 1.9e-97 360.1 320 58.1
Nitab4.5_0000193g0110 Nicotiana tabacum HOM05D004729 ORTHO05D005451 5.3e-95 352.1 362 52.8
EL10Ac1g00023 Beta vulgaris HOM05D004729 ORTHO05D005451 7.6e-94 348.2 335 54.9
AagrBONN_evm.TU.Sc2ySwM_117.2782 Anthoceros agrestis HOM05D004729 ORTHO05D005451 8.1e-88 328.2 312 53.5
Pp3c9_4090 Physcomitrium patens HOM05D004729 ORTHO05D005451 6.9e-87 325.1 319 51.4
BcaNung01386 Brassica carinata HOM05D004729 ORTHO05D005451 5.8e-86 322.0 250 60.8
Aa31LG6G9140 Aethionema arabicum HOM05D004729 ORTHO05D005451 1.4e-84 317.4 204 72.1
Mapoly0100s0036 Marchantia polymorpha HOM05D004729 ORTHO05D005451 1.9e-81 307.0 333 45.9
FvH4_5g31361 Fragaria vesca HOM05D004729 ORTHO05D005451 2.9e-77 293.1 176 77.3
Rhsim11G0066000 Rhododendron simsii HOM05D004729 ORTHO05D005451 1.6e-72 277.3 329 48.6
SalBow7G1557 Salvia bowleyana HOM05D004729 ORTHO05D005451 2.8e-72 276.6 188 69.7
CBR_g4408 Chara braunii HOM05D004729 ORTHO05D005451 2.5e-68 263.5 288 45.1
CSS0041333 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 6.1e-67 258.8 203 65.5
Nn5g28096 Nelumbo nucifera HOM05D004729 ORTHO05D005451 2.3e-66 256.9 307 48.2
SMO356G0070 Selaginella moellendorffii HOM05D004729 ORTHO05D005451 1.1e-65 254.6 245 53.5
arahy.Tifrunner.gnm1.ann1.XVDB66 Arachis hypogaea HOM05D004729 ORTHO05D005451 2.1e-59 233.8 143 79.0
MCO05G148 Micromonas commoda HOM05D004729 ORTHO05D005451 9.1e-55 218.4 256 43.4
PRCOL_00005327 Prasinoderma coloniale HOM05D004729 ORTHO05D005451 1.7e-53 214.2 261 42.9
Nn1g08666 Nelumbo nucifera HOM05D004729 ORTHO05D005451 1.2e-51 208.0 153 67.3
Manes.18G073729 Manihot esculenta HOM05D004729 ORTHO05D005451 1.2e-46 191.4 230 49.6
SEGI_13253 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 2.0e-46 190.7 160 56.2
Cre09.g406000 Chlamydomonas reinhardtii HOM05D004729 ORTHO05D005451 7.7e-46 188.7 286 36.4
BraA09t36427Z Brassica rapa HOM05D004729 ORTHO05D005451 4.2e-44 183.0 209 48.3
A09p07790 Brassica napus HOM05D004729 ORTHO05D005451 5.5e-44 182.6 211 48.3
Aqoxy356s001 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 6.3e-40 169.1 129 62.0
Cfa026220 Carpinus fangiana HOM05D004729 ORTHO05D005451 2.7e-38 163.7 294 36.7
TPR.G675 Trifolium pratense HOM05D004729 ORTHO05D005451 3.2e-36 156.8 79 91.1
SEGI_02892 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 5.5e-36 156.0 161 47.8
FvH4_5g31362 Fragaria vesca HOM05D004729 ORTHO05D005451 2.1e-27 127.5 145 47.6
arahy.Tifrunner.gnm1.ann1.M1Z3QL Arachis hypogaea HOM05D004729 ORTHO05D005451 6.1e-27 125.9 125 53.6
Lalb_Chr11g0065751 Lupinus albus HOM05D004729 ORTHO05D005451 4.4e-25 119.8 181 40.9
Haze_27035 Corylus avellana HOM05D000050 ORTHO05D005451 1.1e-20 105.1 272 27.6
Hma1.2p1_0009F.1_g006083 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 3.6e-19 100.1 82 61.0
Hma1.2p1_0009F.1_g006090 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 3.6e-19 100.1 82 61.0
Aqoxy5G04170 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 5.8e-17 92.8 113 46.9
Dinv27372 Davidia involucrata HOM05D004729 ORTHO05D005451 8.3e-16 89.0 57 71.9
Sabra02G0069200 Salix brachista HOM05D004729 ORTHO05D005451 2.0e-14 84.3 48 77.1
ECA248G3021 Erigeron canadensis HOM05D004729 ORTHO05D005451 3.5e-14 83.6 71 56.3
arahy.Tifrunner.gnm1.ann1.7BX7P6 Arachis hypogaea HOM05D004729 ORTHO05D009789 6.6e-13 79.3 62 64.5
Nn1g08661 Nelumbo nucifera HOM05D004729 ORTHO05D005451 8.3e-08 62.4 40 65.0
CSS0043726 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 3.5e-06 57.0 27 88.9


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