Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0015317 Lotus japonicus HOM05D004247 ORTHO05D004994 1.3e-83 313.2 168 100.0
Ca_15453_v3 Cicer arietinum L. HOM05D004247 ORTHO05D004994 1.4e-71 273.1 168 84.5
Medtr3g114850 Medicago truncatula HOM05D004247 ORTHO05D004994 1.1e-68 263.5 168 81.5
Glyma.04G020300 Glycine max HOM05D004247 ORTHO05D004994 7.4e-68 260.8 168 83.3
CiPaw.08G069600 Carya illinoinensis HOM05D004247 ORTHO05D004994 9.6e-68 260.4 169 82.2
Haze_22717 Corylus avellana HOM05D004247 ORTHO05D004994 1.4e-66 256.5 169 81.7
QL02p013016 Quercus lobata HOM05D004247 ORTHO05D004994 1.8e-66 256.1 168 81.0
Cfa014015 Carpinus fangiana HOM05D004247 ORTHO05D004994 4.1e-66 255.0 169 82.2
COL.COLO4_26078 Corchorus olitorius HOM05D004247 ORTHO05D004994 4.1e-66 255.0 168 78.0
MD15G1006300 Malus domestica HOM05D004247 ORTHO05D004994 4.1e-66 255.0 169 81.7
Psat5g011080 Pisum sativum HOM05D004247 ORTHO05D004994 4.1e-66 255.0 169 79.9
TPR.G38114 Trifolium pratense HOM05D004247 ORTHO05D004994 6.9e-66 254.2 168 78.0
CiPaw.07G143100 Carya illinoinensis HOM05D004247 ORTHO05D004994 1.2e-65 253.4 169 80.5
MD08G1007200 Malus domestica HOM05D004247 ORTHO05D004994 1.2e-65 253.4 169 81.1
Glyma.06G020400 Glycine max HOM05D004247 ORTHO05D004994 1.5e-65 253.1 168 80.4
TWI56G0334 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 1.0e-64 250.4 169 81.1
Lj4C16T12 Lonicera japonica HOM05D004247 ORTHO05D004994 2.2e-64 249.2 169 78.7
Gorai.009G190800 Gossypium raimondii HOM05D004247 ORTHO05D004994 3.8e-64 248.4 170 77.6
Gohir.D05G185400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 8.4e-64 247.3 170 77.1
TAR381G1019 Trochodendron aralioides HOM05D004247 ORTHO05D004994 1.1e-63 246.9 169 78.1
PSO541G1800 Papaver somniferum HOM05D004247 ORTHO05D004994 1.9e-63 246.1 168 76.2
RcHm_v2.0_Chr6g0303721 Rosa chinensis HOM05D004247 ORTHO05D004994 3.2e-63 245.4 170 78.2
PSO675G9160 Papaver somniferum HOM05D004247 ORTHO05D004994 4.2e-63 245.0 168 75.6
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea HOM05D004247 ORTHO05D004994 5.5e-63 244.6 173 78.6
FvH4_2g37890 Fragaria vesca HOM05D004247 ORTHO05D004994 7.2e-63 244.2 168 76.2
Potri.005G246100 Populus trichocarpa HOM05D004247 ORTHO05D004994 7.2e-63 244.2 171 75.4
Duzib116G0390 Durio zibethinus HOM05D004247 ORTHO05D004994 9.3e-63 243.8 170 77.1
FAN20G0823 Fragaria x ananassa HOM05D004247 ORTHO05D004994 9.3e-63 243.8 168 75.0
Gohir.A05G182400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 9.3e-63 243.8 170 77.1
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 1.6e-62 243.0 171 76.0
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 1.6e-62 243.0 171 76.0
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea HOM05D004247 ORTHO05D004994 2.1e-62 242.7 173 78.0
Dinv31897 Davidia involucrata HOM05D004247 ORTHO05D004994 2.1e-62 242.7 163 79.8
FAN15G0804 Fragaria x ananassa HOM05D004247 ORTHO05D004994 2.1e-62 242.7 168 75.6
FAN27G2657 Fragaria x ananassa HOM05D004247 ORTHO05D004994 2.1e-62 242.7 168 75.0
Peaxi162Scf00174g00103 Petunia axillaris HOM05D004247 ORTHO05D004994 3.5e-62 241.9 168 76.2
Nitab4.5_0007524g0020 Nicotiana tabacum HOM05D004247 ORTHO05D004994 7.9e-62 240.7 169 77.5
Nitab4.5_0003030g0010 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.8e-61 239.6 171 76.0
Phvul.009G020300 Phaseolus vulgaris HOM05D004247 ORTHO05D004994 2.3e-61 239.2 168 75.6
Nitab4.5_0001936g0030 Nicotiana tabacum HOM05D004247 ORTHO05D004994 3.0e-61 238.8 169 76.3
Sc26g0004480 Simmondsia chinensis HOM05D004247 ORTHO05D004994 3.0e-61 238.8 170 74.7
Lalb_Chr03g0033581 Lupinus albus HOM05D004247 ORTHO05D004994 3.9e-61 238.4 170 75.9
Sabra05G0190200 Salix brachista HOM05D004247 ORTHO05D004994 3.9e-61 238.4 171 74.3
Thecc.08G052400 Theobroma cacao HOM05D004247 ORTHO05D004994 3.9e-61 238.4 168 74.4
ClCG05G015390 Citrullus lanatus HOM05D004247 ORTHO05D004994 5.1e-61 238.0 168 75.6
MBI08_g05719_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 5.1e-61 238.0 164 77.4
Prupe.1G358900 Prunus persica HOM05D004247 ORTHO05D004994 6.7e-61 237.7 170 74.7
VMungo1309G1934 Vigna mungo HOM05D004247 ORTHO05D004994 6.7e-61 237.7 168 75.6
GSVIVG01008733001 Vitis vinifera HOM05D004247 ORTHO05D004994 6.7e-61 237.7 169 75.7
Lalb_Chr01g0008481 Lupinus albus HOM05D004247 ORTHO05D004994 1.1e-60 236.9 171 74.3
Potri.002G016000 Populus trichocarpa HOM05D004247 ORTHO05D004994 1.1e-60 236.9 171 75.4
Aqoxy6G01936 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 1.9e-60 236.1 169 74.0
Ciclev10002698m.g Citrus clementina HOM05D004247 ORTHO05D004994 1.9e-60 236.1 169 73.4
TAR625G1162 Trochodendron aralioides HOM05D004247 ORTHO05D004994 2.5e-60 235.7 169 74.6
Ah.04g150590 Amaranthus hybridus HOM05D004247 ORTHO05D004994 3.3e-60 235.3 169 73.4
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 3.3e-60 235.3 173 75.1
CSS0046333 Camellia sinensis var. sinensis HOM05D004247 ORTHO05D004994 7.4e-60 234.2 171 76.0
Thhalv10008749m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 9.7e-60 233.8 168 73.2
Sabra02G0012900 Salix brachista HOM05D004247 ORTHO05D004994 9.7e-60 233.8 169 74.6
Lj4P802T100 Lonicera japonica HOM05D004247 ORTHO05D004994 1.6e-59 233.0 168 75.0
MELO3C003725.2 Cucumis melo HOM05D004247 ORTHO05D004994 2.2e-59 232.6 168 75.6
Manes.05G142000 Manihot esculenta HOM05D004247 ORTHO05D004994 2.2e-59 232.6 172 73.3
Actinidia37957 Actinidia chinensis HOM05D004247 ORTHO05D004994 3.7e-59 231.9 168 74.4
CsaV3_3G046150 Cucumis sativus L. HOM05D004247 ORTHO05D004994 3.7e-59 231.9 168 75.0
CAN.G311.79 Capsicum annuum HOM05D004247 ORTHO05D004994 4.8e-59 231.5 168 73.8
Lalb_Chr19g0131621 Lupinus albus HOM05D004247 ORTHO05D004994 8.2e-59 230.7 170 73.5
BolC7t42849H Brassica oleracea HOM05D004247 ORTHO05D004994 1.4e-58 229.9 168 70.8
Cpa.g.sc26.256 Carica papaya HOM05D004247 ORTHO05D004994 1.8e-58 229.6 170 74.1
Sp1g18060 Schrenkiella parvula HOM05D004247 ORTHO05D004994 1.8e-58 229.6 168 70.8
BcaB07g32038 Brassica carinata HOM05D004247 ORTHO05D004994 2.4e-58 229.2 168 70.8
BcaNung03373 Brassica carinata HOM05D004247 ORTHO05D004994 2.4e-58 229.2 168 70.2
C07p23120 Brassica napus HOM05D004247 ORTHO05D004994 2.4e-58 229.2 168 70.2
Cc10_g01080 Coffea canephora HOM05D004247 ORTHO05D004994 2.4e-58 229.2 171 73.7
A07p15730 Brassica napus HOM05D004247 ORTHO05D004994 4.1e-58 228.4 168 70.2
A07p15830 Brassica napus HOM05D004247 ORTHO05D004994 4.1e-58 228.4 168 70.2
BraA07t29309Z Brassica rapa HOM05D004247 ORTHO05D004994 4.1e-58 228.4 168 70.2
MBI05_g34744_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 4.1e-58 228.4 170 72.9
Carub.0001s1985 Capsella rubella HOM05D004247 ORTHO05D004994 2.6e-57 225.7 168 69.6
Migut.N03188 Erythranthe guttata HOM05D004247 ORTHO05D004994 2.6e-57 225.7 170 68.8
CARHR020810 Cardamine hirsuta HOM05D004247 ORTHO05D004994 3.4e-57 225.3 169 71.6
A08p29430 Brassica napus HOM05D004247 ORTHO05D004994 4.5e-57 224.9 168 72.0
BraA08t34878Z Brassica rapa HOM05D004247 ORTHO05D004994 4.5e-57 224.9 168 72.0
THA.LOC104813771 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 4.5e-57 224.9 169 71.6
C08p20070 Brassica napus HOM05D004247 ORTHO05D004994 5.9e-57 224.6 168 71.4
Lsat_1_v5_gn_8_28601 Lactuca sativa HOM05D004247 ORTHO05D004994 7.7e-57 224.2 169 70.4
BcaC07g39030 Brassica carinata HOM05D004247 ORTHO05D004994 1.0e-56 223.8 168 71.4
BcaB03g12872 Brassica carinata HOM05D004247 ORTHO05D004994 2.2e-56 222.6 168 70.8
A06p16430 Brassica napus HOM05D004247 ORTHO05D004994 2.2e-56 222.6 168 70.8
BraA06t24747Z Brassica rapa HOM05D004247 ORTHO05D004994 2.2e-56 222.6 168 70.8
AL1G33170 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 2.9e-56 222.2 168 68.5
AT1G20340 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 5.0e-56 221.5 168 67.3
Rhsim07G0251400 Rhododendron simsii HOM05D004247 ORTHO05D004994 1.4e-55 219.9 170 70.6
SalBow6G1848 Salvia bowleyana HOM05D004247 ORTHO05D004994 1.4e-55 219.9 168 67.9
CANSAT25G3567 Cannabis sativa HOM05D004247 ORTHO05D004994 1.9e-55 219.5 173 69.9
Thhalv10019237m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 1.9e-55 219.5 169 70.4
THA.LOC104809663 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 1.9e-55 219.5 171 69.0
BolC8t49642H Brassica oleracea HOM05D004247 ORTHO05D004994 2.5e-55 219.2 165 70.9
BcaC05g25945 Brassica carinata HOM05D004247 ORTHO05D004994 3.2e-55 218.8 169 69.2
C05p18970 Brassica napus HOM05D004247 ORTHO05D004994 3.2e-55 218.8 169 69.2
BolC5t30597H Brassica oleracea HOM05D004247 ORTHO05D004994 3.2e-55 218.8 169 69.2
Rhsim06G0011800 Rhododendron simsii HOM05D004247 ORTHO05D004994 7.2e-55 217.6 168 67.9
CARHR069640 Cardamine hirsuta HOM05D004247 ORTHO05D004994 9.4e-55 217.2 172 69.8
Sed0002819 Sechium edule HOM05D004247 ORTHO05D004994 9.4e-55 217.2 169 69.8
TWI12G1003 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 1.2e-54 216.9 155 77.4
Lsat_1_v5_gn_0_680 Lactuca sativa HOM05D004247 ORTHO05D004994 1.6e-54 216.5 168 67.9
PGR031G2466 Punica granatum HOM05D004247 ORTHO05D004994 1.6e-54 216.5 170 69.4
Oeu051143.1 Olea europaea HOM05D004247 ORTHO05D004994 4.6e-54 214.9 169 69.2
Sed0013890 Sechium edule HOM05D004247 ORTHO05D004994 4.6e-54 214.9 168 68.5
ATR0661G060 Amborella trichopoda HOM05D004247 ORTHO05D004994 1.4e-53 213.4 169 69.8
BcaC08g47292 Brassica carinata HOM05D004247 ORTHO05D004994 1.4e-53 213.4 171 69.0
BolC6t40043H Brassica oleracea HOM05D004247 ORTHO05D004994 1.4e-53 213.4 171 69.0
Oeu027609.1 Olea europaea HOM05D004247 ORTHO05D004994 1.4e-53 213.4 169 68.6
C06p50040 Brassica napus HOM05D004247 ORTHO05D004994 1.8e-53 213.0 171 69.0
A07p41660 Brassica napus HOM05D004247 ORTHO05D004994 2.3e-53 212.6 171 67.3
BraA07t31695Z Brassica rapa HOM05D004247 ORTHO05D004994 2.3e-53 212.6 171 69.0
Sp5g31220 Schrenkiella parvula HOM05D004247 ORTHO05D004994 2.3e-53 212.6 170 67.6
BcaC08g47103 Brassica carinata HOM05D004247 ORTHO05D004994 3.0e-53 212.2 170 69.4
Oeu021483.1 Olea europaea HOM05D004247 ORTHO05D004994 3.0e-53 212.2 170 68.2
SGA_v2.0_scaffold19G08591 Striga asiatica HOM05D004247 ORTHO05D004994 3.9e-53 211.8 165 67.9
AL2G36140 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 5.1e-53 211.5 172 66.3
AT1G76100 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 8.8e-53 210.7 172 66.3
DCAR_013894 Daucus carota HOM05D004247 ORTHO05D004994 8.8e-53 210.7 172 70.3
Aa31LG7G4700 Aethionema arabicum HOM05D004247 ORTHO05D004994 1.1e-52 210.3 168 63.7
Aqoxy6G01937 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 1.5e-52 209.9 169 66.3
EL10Ac1g02063 Beta vulgaris HOM05D004247 ORTHO05D004994 3.3e-52 208.8 161 69.6
ECA232G3771 Erigeron canadensis HOM05D004247 ORTHO05D004994 5.7e-52 208.0 170 65.9
ECA232G0296 Erigeron canadensis HOM05D004247 ORTHO05D004994 7.4e-52 207.6 168 66.7
HanXRQChr05g0146621 Helianthus annuus HOM05D004247 ORTHO05D004994 7.4e-52 207.6 168 66.7
CDE04G1887 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 4.8e-51 204.9 157 68.8
CDE02G3101 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 8.2e-51 204.1 164 64.6
ECA233G0125 Erigeron canadensis HOM05D004247 ORTHO05D004994 8.2e-51 204.1 164 64.6
Solyc04g082010.1 Solanum lycopersicum HOM05D004247 ORTHO05D004994 8.2e-51 204.1 171 66.1
Sopen04g035660 Solanum pennellii HOM05D004247 ORTHO05D004994 8.2e-51 204.1 171 66.1
Aa31LG4G6220 Aethionema arabicum HOM05D004247 ORTHO05D004994 2.4e-50 202.6 168 66.1
PGSC0003DMG400041620 Solanum tuberosum HOM05D004247 ORTHO05D004994 5.9e-49 198.0 171 63.7
Nn6g31900 Nelumbo nucifera HOM05D004247 ORTHO05D004994 1.3e-48 196.8 146 75.3
unitig_899.g15551 Utricularia gibba HOM05D004247 ORTHO05D004994 1.7e-48 196.4 170 65.3
Migut.C00904 Erythranthe guttata HOM05D004247 ORTHO05D004994 2.5e-47 192.6 168 64.3
AUR62036731 Chenopodium quinoa HOM05D004247 ORTHO05D004994 4.8e-43 178.3 102 81.4
Dinv39560 Davidia involucrata HOM05D004247 ORTHO05D004994 8.2e-43 177.6 100 85.0
TPR.G8442 Trifolium pratense HOM05D004247 ORTHO05D004994 8.2e-43 177.6 100 81.0
AUR62013862 Chenopodium quinoa HOM05D004247 ORTHO05D004994 9.1e-42 174.1 102 79.4
Zm00001eb268360 Zea mays HOM05D004247 ORTHO05D004994 7.7e-41 171.0 169 59.8
Zm00001eb379570 Zea mays HOM05D004247 ORTHO05D004994 3.2e-39 165.6 170 60.0
SEGI_02730 Sequoiadendron giganteum HOM05D004247 ORTHO05D004994 5.5e-39 164.9 174 54.6
Os06g0101600 Oryza sativa ssp. japonica HOM05D004247 ORTHO05D004994 2.7e-38 162.5 169 58.6
Sc02g0008920 Simmondsia chinensis HOM05D004247 ORTHO05D004994 6.7e-37 157.9 144 60.4
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis HOM05D004247 ORTHO05D004994 5.3e-34 148.3 174 47.1
Pp3c21_4230 Physcomitrium patens HOM05D004247 ORTHO05D004994 1.6e-33 146.7 168 50.0
HPP92_015000 Vanilla planifolia HOM05D004247 ORTHO05D004994 1.6e-33 146.7 217 46.1
Pp3c19_21160 Physcomitrium patens HOM05D004247 ORTHO05D004994 2.7e-33 146.0 171 48.5
Pp3c18_13090 Physcomitrium patens HOM05D004247 ORTHO05D004994 8.5e-32 141.0 173 46.2
SMO351G0102 Selaginella moellendorffii HOM05D004247 ORTHO05D004994 1.1e-31 140.6 175 46.9
PRCOL_00002380 Prasinoderma coloniale HOM05D004247 ORTHO05D004994 4.0e-29 132.1 145 49.7
CBR_g18572 Chara braunii HOM05D004247 ORTHO05D004994 1.3e-27 127.1 171 49.7
Cre03.g182551 Chlamydomonas reinhardtii HOM05D004247 ORTHO05D004994 3.7e-27 125.6 147 47.6
Atru.chr13.210 Acer truncatum HOM05D004247 ORTHO05D004994 4.1e-26 122.1 176 50.6
Nitab4.5_0006806g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.6e-25 120.2 70 78.6
Nitab4.5_0001476g0060 Nicotiana tabacum HOM05D004247 ORTHO05D004994 7.7e-25 117.9 70 75.7
MCO15G475 Micromonas commoda HOM05D004247 ORTHO05D004994 2.2e-24 116.3 183 43.2
Mapoly0080s0027 Marchantia polymorpha HOM05D004247 ORTHO05D004994 9.4e-23 110.9 170 44.1
Nitab4.5_0002353g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.6e-17 93.6 67 68.7
Nitab4.5_0000498g0120 Nicotiana tabacum HOM05D004247 ORTHO05D004994 2.7e-17 92.8 81 60.5
Cc01_g01320 Coffea canephora HOM05D004247 ORTHO05D004994 8.0e-14 81.3 44 84.1
Cc01_g01310 Coffea canephora HOM05D004247 ORTHO05D004994 2.0e-09 66.6 71 63.4


User provided reference genes

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