Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0009858 Lotus japonicus HOM05D005861 ORTHO05D007151 1.4e-124 449.5 211 100.0
Lj1g0026190 Lotus japonicus HOM05D005861 ORTHO05D007151 2.1e-43 179.9 138 69.6
Lj6g0026320 Lotus japonicus HOM05D005861 ORTHO05D007151 1.8e-39 166.8 113 77.9
Lalb_Chr18g0052021 Lupinus albus HOM05D005861 ORTHO05D007151 2.7e-35 152.9 111 70.3
Medtr2g035660 Medicago truncatula HOM05D005861 ORTHO05D007151 2.3e-34 149.8 113 68.1
Manes.03G071200 Manihot esculenta HOM05D005861 ORTHO05D007151 3.0e-34 149.4 117 65.8
Haze_05240 Corylus avellana HOM05D005861 ORTHO05D007151 3.9e-34 149.1 124 62.1
VMungo1309G1344 Vigna mungo HOM05D005861 ORTHO05D007151 6.7e-34 148.3 113 68.1
Potri.003G155100 Populus trichocarpa HOM05D005861 ORTHO05D007151 8.8e-34 147.9 113 66.4
MELO3C002396.2 Cucumis melo HOM05D005861 ORTHO05D007151 1.1e-33 147.5 117 64.1
GSVIVG01012161001 Vitis vinifera HOM05D005861 ORTHO05D007151 1.1e-33 147.5 113 66.4
PGR004G1814 Punica granatum HOM05D005861 ORTHO05D007151 1.5e-33 147.1 113 66.4
TPR.G26579 Trifolium pratense HOM05D005861 ORTHO05D007151 1.5e-33 147.1 113 69.0
Thecc.09G140900 Theobroma cacao HOM05D005861 ORTHO05D007151 2.5e-33 146.4 113 67.3
arahy.Tifrunner.gnm1.ann1.MH4CM1 Arachis hypogaea HOM05D005861 ORTHO05D007151 3.3e-33 146.0 113 67.3
CsaV3_1G010060 Cucumis sativus L. HOM05D005861 ORTHO05D007151 3.3e-33 146.0 117 63.2
Glyma.15G156500 Glycine max HOM05D005861 ORTHO05D007151 3.3e-33 146.0 113 66.4
Nitab4.5_0000844g0330 Nicotiana tabacum HOM05D005861 ORTHO05D007151 3.3e-33 146.0 113 64.6
Phvul.009G243500 Phaseolus vulgaris HOM05D005861 ORTHO05D007151 3.3e-33 146.0 113 65.5
Prupe.4G119100 Prunus persica HOM05D005861 ORTHO05D007151 3.3e-33 146.0 113 64.6
Duzib168G0529 Durio zibethinus HOM05D005861 ORTHO05D007151 4.3e-33 145.6 113 66.4
Glyma.09G049800 Glycine max HOM05D005861 ORTHO05D007151 4.3e-33 145.6 113 66.4
Cfa001144 Carpinus fangiana HOM05D005861 ORTHO05D007151 5.7e-33 145.2 112 66.1
CAN.G809.40 Capsicum annuum HOM05D005861 ORTHO05D007151 7.4e-33 144.8 113 64.6
CiPaw.09G138900 Carya illinoinensis HOM05D005861 ORTHO05D007151 7.4e-33 144.8 113 63.7
ClCG03G004130 Citrullus lanatus HOM05D005861 ORTHO05D007151 7.4e-33 144.8 117 63.2
COL.COLO4_24113 Corchorus olitorius HOM05D005861 ORTHO05D003578 7.4e-33 144.8 110 67.3
MD10G1226200 Malus domestica HOM05D005861 ORTHO05D007151 7.4e-33 144.8 113 64.6
TWI63G1685 Tripterygium wilfordii HOM05D005861 ORTHO05D007151 7.4e-33 144.8 118 62.7
QL11p011864 Quercus lobata HOM05D005861 ORTHO05D007151 9.7e-33 144.4 117 64.1
QL93p0142_0007 Quercus lobata HOM05D005861 ORTHO05D007151 9.7e-33 144.4 117 64.1
Hund25553 Selenicereus undatus HOM05D005861 ORTHO05D007151 9.7e-33 144.4 111 66.7
EL10Ac3g07109 Beta vulgaris HOM05D005861 ORTHO05D007151 1.3e-32 144.1 113 65.5
Gohir.A05G011700 Gossypium hirsutum HOM05D005861 ORTHO05D007151 1.7e-32 143.7 117 63.2
Gohir.D05G012400 Gossypium hirsutum HOM05D005861 ORTHO05D007151 1.7e-32 143.7 117 63.2
Gohir.D05G012700 Gossypium hirsutum HOM05D005861 ORTHO05D007151 1.7e-32 143.7 117 63.2
Gorai.009G012700 Gossypium raimondii HOM05D005861 ORTHO05D007151 1.7e-32 143.7 117 63.2
Sc24g0002940 Simmondsia chinensis HOM05D005861 ORTHO05D007151 1.7e-32 143.7 113 63.7
Ciclev10015087m.g Citrus clementina HOM05D005861 ORTHO05D007151 2.2e-32 143.3 113 61.9
Sed0025210 Sechium edule HOM05D005861 ORTHO05D007151 2.2e-32 143.3 117 63.2
Sopen02g026550 Solanum pennellii HOM05D005861 ORTHO05D007151 2.2e-32 143.3 113 63.7
TWI38G1305 Tripterygium wilfordii HOM05D005861 ORTHO05D007151 2.2e-32 143.3 117 64.1
Gorai.N022300 Gossypium raimondii HOM05D005861 ORTHO05D007151 2.8e-32 142.9 157 51.0
Nitab4.5_0000632g0140 Nicotiana tabacum HOM05D005861 ORTHO05D007151 4.8e-32 142.1 110 66.4
TAR636G0982 Trochodendron aralioides HOM05D005861 ORTHO05D007151 4.8e-32 142.1 113 64.6
Atru.chr10.266 Acer truncatum HOM05D005861 ORTHO05D007151 6.3e-32 141.7 117 60.7
Dinv05874 Davidia involucrata HOM05D005861 ORTHO05D007151 6.3e-32 141.7 113 62.8
arahy.Tifrunner.gnm1.ann1.RN3XR3 Arachis hypogaea HOM05D005861 ORTHO05D007151 1.1e-31 141.0 114 63.2
Cc09_g01980 Coffea canephora HOM05D005861 ORTHO05D007151 1.1e-31 141.0 113 62.8
Solyc02g081920.3 Solanum lycopersicum HOM05D005861 ORTHO05D007151 1.1e-31 141.0 113 62.8
PSO063G0366 Papaver somniferum HOM05D005861 ORTHO05D007151 1.4e-31 140.6 113 61.1
PSO782G3554 Papaver somniferum HOM05D005861 ORTHO05D007151 1.4e-31 140.6 113 61.1
Peaxi162Scf00036g00158 Petunia axillaris HOM05D005861 ORTHO05D007151 1.4e-31 140.6 113 60.2
MSTRG.18594 Avicennia marina HOM05D005861 ORTHO05D007151 2.4e-31 139.8 113 61.1
ATR0763G186 Amborella trichopoda HOM05D005479 ORTHO05D007756 3.1e-31 139.4 113 62.8
Aqoxy3G04101 Aquilegia oxysepala HOM05D005861 ORTHO05D007151 3.1e-31 139.4 117 61.5
Nn7g38377 Nelumbo nucifera HOM05D005861 ORTHO05D007151 3.1e-31 139.4 113 63.7
Psat1g150560 Pisum sativum HOM05D005861 ORTHO05D007151 3.1e-31 139.4 113 63.7
PGSC0003DMG401007333 Solanum tuberosum HOM05D005861 ORTHO05D007151 3.1e-31 139.4 113 61.1
CDE02G4422 Ceratophyllum demersum HOM05D005861 ORTHO05D007151 4.1e-31 139.0 117 65.0
DCAR_003751 Daucus carota HOM05D005861 ORTHO05D007151 4.1e-31 139.0 113 61.9
FvH4_3g13130 Fragaria vesca HOM05D005861 ORTHO05D007151 6.9e-31 138.3 113 62.8
FAN16G2684 Fragaria x ananassa HOM05D005861 ORTHO05D007151 6.9e-31 138.3 113 62.8
RcHm_v2.0_Chr5g0021381 Rosa chinensis HOM05D005861 ORTHO05D007151 9.1e-31 137.9 113 63.7
CSS0003156 Camellia sinensis var. sinensis HOM05D005861 ORTHO05D007151 1.2e-30 137.5 113 61.1
SGA_v2.0_scaffold298G47711 Striga asiatica HOM05D005861 ORTHO05D007151 1.5e-30 137.1 113 60.2
FAN21G1611 Fragaria x ananassa HOM05D005861 ORTHO05D007151 3.4e-30 136.0 113 61.9
Migut.M02023 Erythranthe guttata HOM05D005861 ORTHO05D007151 5.9e-30 135.2 113 59.3
Migut.O00467 Erythranthe guttata HOM05D005861 ORTHO05D007151 5.9e-30 135.2 113 59.3
Oeu008732.1 Olea europaea HOM05D005861 ORTHO05D007151 1.3e-29 134.0 113 59.3
THA.LOC104811881 Tarenaya hassleriana HOM05D005861 ORTHO05D007151 1.3e-29 134.0 113 61.1
CARHR226960 Cardamine hirsuta HOM05D005861 ORTHO05D007151 2.9e-29 132.9 113 61.9
Aa31LG6G2540 Aethionema arabicum HOM05D005861 ORTHO05D007151 3.8e-29 132.5 113 60.2
Carub.0007s2100 Capsella rubella HOM05D005861 ORTHO05D007151 3.8e-29 132.5 113 61.1
AL7G33690 Arabidopsis lyrata HOM05D005861 ORTHO05D007151 5.0e-29 132.1 113 60.2
Eucgr.D00007 Eucalyptus grandis HOM05D005861 ORTHO05D007151 8.5e-29 131.3 113 58.4
Sp7g18560 Schrenkiella parvula HOM05D005861 ORTHO05D007151 1.1e-28 131.0 113 59.3
Ah.08g212320 Amaranthus hybridus HOM05D005861 ORTHO05D007151 1.4e-28 130.6 111 60.4
AT4G20130 Arabidopsis thaliana HOM05D005861 ORTHO05D007151 1.9e-28 130.2 113 59.3
BcaB03g11658 Brassica carinata HOM05D005861 ORTHO05D007151 2.1e-27 126.7 113 58.4
BcaC01g00656 Brassica carinata HOM05D005861 ORTHO05D007151 2.1e-27 126.7 113 58.4
C03p82790 Brassica napus HOM05D005861 ORTHO05D007151 2.1e-27 126.7 113 58.4
BolC3t20561H Brassica oleracea HOM05D005861 ORTHO05D007151 2.1e-27 126.7 113 58.4
HanXRQChr04g0116561 Helianthus annuus HOM05D005861 ORTHO05D007151 6.1e-27 125.2 113 55.8
A08p14640 Brassica napus HOM05D005861 ORTHO05D007151 1.4e-26 124.0 113 57.5
BraA08t33451Z Brassica rapa HOM05D005861 ORTHO05D007151 1.4e-26 124.0 113 57.5
Sabra03G0112200 Salix brachista HOM05D005861 ORTHO05D007151 1.4e-26 124.0 66 84.8
A04p29830 Brassica napus HOM05D005861 ORTHO05D007151 2.3e-26 123.2 113 56.6
BraA04t18443Z Brassica rapa HOM05D005861 ORTHO05D007151 2.3e-26 123.2 111 56.8
ECA236G3447 Erigeron canadensis HOM05D005861 ORTHO05D007151 3.0e-26 122.9 113 53.1
unitig_37.g12046 Utricularia gibba HOM05D005861 ORTHO05D007151 1.1e-25 120.9 113 53.1
Lsat_1_v5_gn_7_27441 Lactuca sativa HOM05D005861 ORTHO05D007151 2.0e-25 120.2 113 52.2
AUR62040329 Chenopodium quinoa HOM05D005861 ORTHO05D007151 7.4e-25 118.2 79 67.1
Cfa001273 Carpinus fangiana HOM05D005861 ORTHO05D007151 1.3e-24 117.5 64 81.2
AUR62039890 Chenopodium quinoa HOM05D005861 ORTHO05D007151 1.3e-24 117.5 89 62.9
Thhalv10027180m.g Eutrema salsugineum HOM05D005861 ORTHO05D007151 5.3e-23 112.1 98 59.2
vmacro03562 Vaccinium macrocarpon HOM05D005861 ORTHO05D007151 1.5e-22 110.5 69 68.1
Zm00001eb345040 Zea mays HOM05D005861 ORTHO05D007151 1.3e-21 107.5 113 49.6
FAN25G2772 Fragaria x ananassa HOM05D005861 ORTHO05D007151 1.5e-20 104.0 97 57.7
Mapoly0003s0096 Marchantia polymorpha HOM05D005861 ORTHO05D007151 6.7e-18 95.1 122 42.6
Pp3c8_21700 Physcomitrium patens HOM05D005861 ORTHO05D007151 2.6e-17 93.2 111 45.9
MD05G1244800 Malus domestica HOM05D005861 ORTHO05D007151 1.7e-16 90.5 111 44.1
SMO331G0022 Selaginella moellendorffii HOM05D005861 ORTHO05D007151 1.2e-14 84.3 111 40.5
AagrBONN_evm.TU.Sc2ySwM_344.4889 Anthoceros agrestis HOM05D005861 ORTHO05D007151 1.6e-14 84.0 111 42.3
Cpa.g.sc30.93 Carica papaya HOM05D005861 ORTHO05D007151 1.5e-12 77.4 113 41.6
HPP92_009503 Vanilla planifolia HOM05D005861 ORTHO05D007151 1.5e-09 67.4 79 50.6
CBR_g61479 Chara braunii HOM05D005861 ORTHO05D007151 2.0e-06 57.0 65 43.1
Ca_01979_v3 Cicer arietinum L. HOM05D005861 ORTHO05D007151 3.5e-06 56.2 66 51.5
Eucgr.F01825 Eucalyptus grandis HOM05D000924 ORTHO05D001209 5.9e-06 55.5 43 53.5


User provided reference genes

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