Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0007847 Lotus japonicus HOM05D005673 ORTHO05D007081 5.4e-147 524.2 255 100.0
Ca_07421_v3 Cicer arietinum L. HOM05D005673 ORTHO05D007081 3.3e-120 435.3 256 83.2
TPR.G10191 Trifolium pratense HOM05D005673 ORTHO05D007081 5.9e-117 424.5 256 83.2
Glyma.08G340700 Glycine max HOM05D005673 ORTHO05D007081 7.7e-117 424.1 263 81.7
Lalb_Chr19g0126251 Lupinus albus HOM05D005673 ORTHO05D007081 8.8e-113 410.6 251 80.1
Phvul.008G138600 Phaseolus vulgaris HOM05D005673 ORTHO05D007081 2.8e-111 405.6 262 78.2
arahy.Tifrunner.gnm1.ann1.R12QR1 Arachis hypogaea HOM05D005673 ORTHO05D007081 8.2e-103 377.5 258 70.2
arahy.Tifrunner.gnm1.ann1.YNZN7C Arachis hypogaea HOM05D005673 ORTHO05D007081 1.2e-101 373.6 253 71.1
QL08p057314 Quercus lobata HOM05D005673 ORTHO05D007081 1.6e-85 320.1 257 62.3
Ciclev10032487m.g Citrus clementina HOM05D005673 ORTHO05D007081 2.0e-85 319.7 255 61.6
GSVIVG01032643001 Vitis vinifera HOM05D005673 ORTHO05D007081 7.7e-85 317.8 260 59.2
Potri.008G046400 Populus trichocarpa HOM05D005673 ORTHO05D007081 3.8e-84 315.5 259 61.0
Thecc.10G064600 Theobroma cacao HOM05D005673 ORTHO05D007081 4.2e-83 312.0 256 61.3
CiPaw.02G177700 Carya illinoinensis HOM05D005673 ORTHO05D007081 5.5e-83 311.6 255 62.0
TWI38G1168 Tripterygium wilfordii HOM05D005673 ORTHO05D007081 9.4e-83 310.8 258 60.9
MD01G1114500 Malus domestica HOM05D005673 ORTHO05D007081 1.2e-82 310.5 259 62.2
Cfa001572 Carpinus fangiana HOM05D005673 ORTHO05D007081 2.1e-82 309.7 255 61.6
Haze_16957 Corylus avellana HOM05D005673 ORTHO05D007081 2.7e-82 309.3 255 61.2
MD07G1182600 Malus domestica HOM05D005673 ORTHO05D007081 2.7e-82 309.3 259 61.8
Sabra08G0032600 Salix brachista HOM05D005673 ORTHO05D007081 1.4e-81 307.0 259 59.8
Manes.07G105200 Manihot esculenta HOM05D005673 ORTHO05D007081 2.3e-81 306.2 258 58.5
CANSAT11G2273 Cannabis sativa HOM05D005673 ORTHO05D007081 2.0e-80 303.1 258 57.4
Duzib114G0197 Durio zibethinus HOM05D005673 ORTHO05D007081 7.5e-80 301.2 256 59.8
Gohir.A06G179004 Gossypium hirsutum HOM05D005673 ORTHO05D007081 6.3e-79 298.1 254 60.6
Gorai.010G203600 Gossypium raimondii HOM05D005673 ORTHO05D007081 6.3e-79 298.1 254 60.2
Aqoxy4G03141 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 8.3e-79 297.7 258 57.4
Gohir.D06G174000 Gossypium hirsutum HOM05D005673 ORTHO05D007081 1.8e-78 296.6 254 59.8
FvH4_7g20560 Fragaria vesca HOM05D005673 ORTHO05D007081 3.1e-78 295.8 253 58.9
FAN06G0951 Fragaria x ananassa HOM05D005673 ORTHO05D007081 3.1e-78 295.8 253 58.9
FAN10G0505 Fragaria x ananassa HOM05D005673 ORTHO05D007081 4.1e-78 295.4 253 58.9
PGR142G2170 Punica granatum HOM05D005673 ORTHO05D007081 4.1e-78 295.4 262 55.7
Cfa005598 Carpinus fangiana HOM05D005673 ORTHO05D007081 5.4e-78 295.0 257 59.9
COL.COLO4_08204 Corchorus olitorius HOM05D005673 ORTHO05D007081 7.0e-78 294.7 260 57.7
FAN03G2886 Fragaria x ananassa HOM05D005673 ORTHO05D007081 7.0e-78 294.7 253 58.5
RcHm_v2.0_Chr1g0364441 Rosa chinensis HOM05D005673 ORTHO05D007081 7.0e-78 294.7 253 58.5
Actinidia03012 Actinidia chinensis HOM05D005673 ORTHO05D007081 9.1e-78 294.3 255 57.6
Nitab4.5_0000575g0020 Nicotiana tabacum HOM05D005673 ORTHO05D007081 1.2e-77 293.9 255 57.3
FAN06G2416 Fragaria x ananassa HOM05D005673 ORTHO05D007081 2.0e-77 293.1 253 58.1
Hund22450 Selenicereus undatus HOM05D005673 ORTHO05D007081 2.0e-77 293.1 262 57.3
FAN01G1496 Fragaria x ananassa HOM05D005673 ORTHO05D007081 3.5e-77 292.4 253 58.5
FAN01G2008 Fragaria x ananassa HOM05D005673 ORTHO05D007081 3.5e-77 292.4 253 58.5
Ah.16g108000 Amaranthus hybridus HOM05D005673 ORTHO05D007081 5.9e-77 291.6 269 56.5
Actinidia38234 Actinidia chinensis HOM05D005673 ORTHO05D007081 1.7e-76 290.0 255 56.5
AUR62036006 Chenopodium quinoa HOM05D005673 ORTHO05D007081 1.7e-76 290.0 258 58.1
Nitab4.5_0002078g0030 Nicotiana tabacum HOM05D005673 ORTHO05D007081 1.7e-76 290.0 255 56.9
CsaV3_5G006400 Cucumis sativus L. HOM05D005673 ORTHO05D007081 8.6e-76 287.7 253 60.1
ClCG02G013770 Citrullus lanatus HOM05D005673 ORTHO05D007081 1.1e-75 287.3 255 58.8
PSO339G1442 Papaver somniferum HOM05D005673 ORTHO05D007081 2.5e-75 286.2 259 56.8
PGSC0003DMG400002916 Solanum tuberosum HOM05D005673 ORTHO05D007081 2.5e-75 286.2 253 56.1
MELO3C011718.2 Cucumis melo HOM05D005673 ORTHO05D007081 5.5e-75 285.0 255 59.2
Medtr7g047440 Medicago truncatula HOM05D005673 ORTHO05D007081 5.5e-75 285.0 157 88.5
Medtr7g451610 Medicago truncatula HOM05D005673 ORTHO05D007081 5.5e-75 285.0 157 88.5
Medtr7g451710 Medicago truncatula HOM05D005673 ORTHO05D007081 5.5e-75 285.0 157 88.5
CAN.G551.89 Capsicum annuum HOM05D005673 ORTHO05D007081 7.2e-75 284.6 253 54.5
PSO384G5123 Papaver somniferum HOM05D005673 ORTHO05D007081 7.2e-75 284.6 257 57.6
Solyc12g009500.2 Solanum lycopersicum HOM05D005673 ORTHO05D007081 9.5e-75 284.3 253 55.3
Sopen12g004500 Solanum pennellii HOM05D005673 ORTHO05D007081 9.5e-75 284.3 253 55.7
CSS0045417 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 3.6e-74 282.3 255 57.6
THA.LOC104825722 Tarenaya hassleriana HOM05D005673 ORTHO05D007081 4.7e-74 282.0 259 55.6
ECA233G0150 Erigeron canadensis HOM05D005673 ORTHO05D007081 8.0e-74 281.2 251 57.4
Sed0006326 Sechium edule HOM05D005673 ORTHO05D007081 1.0e-73 280.8 255 58.0
MBI14_g17793_MAGBIO Magnolia biondii HOM05D005673 ORTHO05D007081 2.3e-73 279.6 252 57.1
EL10Ac2g03532 Beta vulgaris HOM05D005673 ORTHO05D007081 3.0e-73 279.3 257 55.3
CSS0019421 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 3.0e-73 279.3 255 56.9
Eucgr.G02786 Eucalyptus grandis HOM05D005673 ORTHO05D007081 1.5e-72 276.9 255 54.9
HanXRQChr08g0219361 Helianthus annuus HOM05D005673 ORTHO05D007081 1.3e-71 273.9 256 54.3
Lj1A928T62 Lonicera japonica HOM05D005673 ORTHO05D007081 3.7e-71 272.3 259 52.5
Lsat_1_v5_gn_8_21281 Lactuca sativa HOM05D005673 ORTHO05D007081 1.1e-70 270.8 260 53.1
Lj1A926T37 Lonicera japonica HOM05D005673 ORTHO05D007081 1.1e-70 270.8 259 52.1
MSTRG.9191 Avicennia marina HOM05D005673 ORTHO05D007081 2.4e-70 269.6 257 52.1
Prupe.2G221200 Prunus persica HOM05D005673 ORTHO05D007081 3.2e-70 269.2 221 62.9
A09p28870 Brassica napus HOM05D005673 ORTHO05D007081 1.6e-69 266.9 254 54.3
TAR623G0755 Trochodendron aralioides HOM05D005673 ORTHO05D007081 1.6e-69 266.9 220 63.2
CARHR261110 Cardamine hirsuta HOM05D005673 ORTHO05D007081 2.7e-69 266.2 259 53.7
BcaC04g21010 Brassica carinata HOM05D005673 ORTHO05D007081 4.5e-69 265.4 254 53.9
C09p36690 Brassica napus HOM05D005673 ORTHO05D007081 4.5e-69 265.4 254 53.9
BolC9t56500H Brassica oleracea HOM05D005673 ORTHO05D007081 4.5e-69 265.4 254 53.9
Aa31LG9G11910 Aethionema arabicum HOM05D005673 ORTHO05D007081 5.9e-69 265.0 254 53.1
SalBow4G0159 Salvia bowleyana HOM05D005673 ORTHO05D007081 5.9e-69 265.0 252 51.6
BcaB01g01447 Brassica carinata HOM05D005673 ORTHO05D007081 7.8e-69 264.6 262 53.1
Thhalv10028887m.g Eutrema salsugineum HOM05D005673 ORTHO05D007081 7.8e-69 264.6 258 54.3
AL6G43874 Arabidopsis lyrata HOM05D005673 ORTHO05D007081 2.3e-68 263.1 259 52.5
Carub.0006s2866 Capsella rubella HOM05D005673 ORTHO05D007081 2.3e-68 263.1 260 52.7
AT4G10090 Arabidopsis thaliana HOM05D005673 ORTHO05D007081 3.9e-68 262.3 259 52.5
Sp6g07430 Schrenkiella parvula HOM05D005673 ORTHO05D007081 6.6e-68 261.5 259 52.5
SGA_v2.0_scaffold62G21443 Striga asiatica HOM05D005673 ORTHO05D007081 7.3e-67 258.1 251 51.0
VMungo1383G1385 Vigna mungo HOM05D005673 ORTHO05D007081 1.2e-66 257.3 155 80.6
Atru.BG.271.p Acer truncatum HOM05D005673 ORTHO05D007081 1.6e-66 256.9 228 55.3
DCAR_015256 Daucus carota HOM05D005673 ORTHO05D007081 2.1e-66 256.5 313 47.3
Cc09_g02320 Coffea canephora HOM05D005673 ORTHO05D007081 4.7e-66 255.4 260 50.4
Rhsim03G0121300 Rhododendron simsii HOM05D005673 ORTHO05D007081 1.5e-64 250.4 225 56.0
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 2.4e-62 243.0 251 49.4
Sc20g0002250 Simmondsia chinensis HOM05D005673 ORTHO05D007081 2.3e-60 236.5 227 52.4
vmacro07099 Vaccinium macrocarpon HOM05D005673 ORTHO05D007081 5.0e-60 235.3 232 52.6
AUR62041616 Chenopodium quinoa HOM05D005673 ORTHO05D007081 5.6e-59 231.9 259 47.9
HPP92_012063 Vanilla planifolia HOM05D005673 ORTHO05D007081 5.6e-59 231.9 265 47.2
Migut.F02013 Erythranthe guttata HOM05D005673 ORTHO05D007081 2.1e-58 229.9 267 47.9
Zm00001eb378810 Zea mays HOM05D005673 ORTHO05D007081 2.1e-58 229.9 255 47.1
Oeu008278.1 Olea europaea HOM05D005673 ORTHO05D007081 1.4e-57 227.3 213 54.9
Os03g0284000 Oryza sativa ssp. japonica HOM05D005673 ORTHO05D007081 4.9e-55 218.8 255 44.7
Atru.chr12.608 Acer truncatum HOM05D005673 ORTHO05D007081 1.4e-54 217.2 164 62.8
Psat3g152960 Pisum sativum HOM05D005673 ORTHO05D007081 7.1e-54 214.9 121 85.1
Peaxi162Scf00170g00413 Petunia axillaris HOM05D005673 ORTHO05D007081 9.2e-54 214.5 246 48.8
Nn2g10602 Nelumbo nucifera HOM05D005673 ORTHO05D007081 2.3e-52 209.9 188 55.3
Psat0s9937g0040 Pisum sativum HOM05D005673 ORTHO05D007081 8.9e-49 198.0 113 85.8
Dinv25934 Davidia involucrata HOM05D005673 ORTHO05D007081 5.8e-48 195.3 165 58.8
Hma1.2p1_0348F.1_g131860 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 1.9e-46 190.3 151 58.3
MD00G1166800 Malus domestica HOM05D005673 ORTHO05D007081 1.1e-43 181.0 184 49.5
Mapoly0003s0199 Marchantia polymorpha HOM05D005673 ORTHO05D007081 1.3e-39 167.5 250 41.2
SGA_v2.0_scaffold17G08196 Striga asiatica HOM05D005673 ORTHO05D007081 3.0e-36 156.4 156 46.8
Psat3g152920 Pisum sativum HOM05D005673 ORTHO05D007081 8.7e-36 154.8 101 76.2
Psat3g153040 Pisum sativum HOM05D005673 ORTHO05D007081 2.4e-33 146.7 101 73.3
unitig_37.g12298 Utricularia gibba HOM05D005673 ORTHO05D007081 3.8e-31 139.4 122 49.2
HPP92_012075 Vanilla planifolia HOM05D005673 ORTHO05D007081 8.4e-31 138.3 149 46.3
Pp3c2_31740 Physcomitrium patens HOM05D005673 ORTHO05D007081 1.9e-30 137.1 261 31.4
SMO347G0616 Selaginella moellendorffii HOM05D005673 ORTHO05D007081 3.2e-30 136.3 204 39.7
PSO713G0026 Papaver somniferum HOM05D005673 ORTHO05D007081 1.1e-27 127.9 163 48.5
Medtr7g050450 Medicago truncatula HOM05D005673 ORTHO05D007081 1.9e-27 127.1 168 46.4
AagrBONN_evm.TU.Sc2ySwM_362.1467 Anthoceros agrestis HOM05D005673 ORTHO05D007081 5.6e-27 125.6 215 33.5
VMungo1383G3547 Vigna mungo HOM05D005673 ORTHO05D007081 4.5e-24 115.9 81 75.3
Aqoxy4G03136 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 1.1e-22 111.3 161 44.7
unitig_37.g12299 Utricularia gibba HOM05D005673 ORTHO05D007081 1.4e-17 94.4 102 47.1
Hma1.2p1_0348F.1_g131840 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 1.8e-17 94.0 79 60.8
HanXRQChr02g0043631 Helianthus annuus HOM05D005673 ORTHO05D007081 8.4e-15 85.1 92 43.5
Cpa.g.c44350 Carica papaya HOM05D005673 ORTHO05D007081 1.1e-14 84.7 75 58.7
HanXRQChr13g0394111 Helianthus annuus HOM05D005673 ORTHO05D007081 6.7e-12 75.5 67 50.7
Cpa.g.sc5360.1 Carica papaya HOM05D005673 ORTHO05D007081 8.7e-12 75.1 48 68.8
BcaB04g18418 Brassica carinata HOM05D005673 ORTHO05D007081 1.5e-11 74.3 92 44.6
CBR_g23354 Chara braunii HOM05D005673 ORTHO05D007081 4.1e-09 66.2 110 34.5
MD01G1114600 Malus domestica HOM05D005673 ORTHO05D007081 3.8e-07 59.7 65 60.0


User provided reference genes

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