Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0004162 Lotus japonicus HOM05D004491 ORTHO05D006742 3.2e-237 824.7 415 100.0
Ca_09104_v3 Cicer arietinum L. HOM05D004491 ORTHO05D006742 2.9e-206 721.8 415 87.0
Glyma.03G207900 Glycine max HOM05D004491 ORTHO05D006742 1.9e-205 719.2 415 85.8
Medtr7g107480 Medicago truncatula HOM05D004491 ORTHO05D006742 5.5e-205 717.6 415 85.8
Psat3g025480 Pisum sativum HOM05D004491 ORTHO05D006742 9.3e-205 716.8 415 85.8
Glyma.19G205200 Glycine max HOM05D004491 ORTHO05D006742 5.1e-203 711.1 415 85.3
VMungo1383G0326 Vigna mungo HOM05D004491 ORTHO05D006742 6.9e-200 700.7 415 84.6
Phvul.001G201100 Phaseolus vulgaris HOM05D004491 ORTHO05D006742 6.5e-198 694.1 415 84.1
arahy.Tifrunner.gnm1.ann1.16527J Arachis hypogaea HOM05D004491 ORTHO05D006742 1.2e-196 689.9 417 83.5
arahy.Tifrunner.gnm1.ann1.5A22SW Arachis hypogaea HOM05D004491 ORTHO05D006742 6.0e-196 687.6 417 83.0
CANSAT25G3440 Cannabis sativa HOM05D004491 ORTHO05D006742 4.3e-194 681.4 414 82.4
Lalb_Chr25g0287571 Lupinus albus HOM05D004491 ORTHO05D006742 1.2e-191 673.3 417 81.1
Prupe.8G251000 Prunus persica HOM05D004491 ORTHO05D006742 1.3e-190 669.8 415 80.0
ClCG01G000050 Citrullus lanatus HOM05D004491 ORTHO05D006742 5.0e-190 667.9 415 79.5
Hma1.2p1_0209F.1_g089210 Hydrangea macrophylla HOM05D004491 ORTHO05D006742 1.1e-189 666.8 414 80.0
Lalb_Chr20g0111001 Lupinus albus HOM05D004491 ORTHO05D006742 3.2e-189 665.2 418 79.4
FAN20G1381 Fragaria x ananassa HOM05D004491 ORTHO05D006742 7.2e-189 664.1 415 80.2
TPR.G32310 Trifolium pratense HOM05D004491 ORTHO05D006742 7.2e-189 664.1 403 82.6
RcHm_v2.0_Chr6g0292401 Rosa chinensis HOM05D004491 ORTHO05D006742 1.6e-188 662.9 415 79.0
CiPaw.07G098600 Carya illinoinensis HOM05D004491 ORTHO05D006742 4.6e-188 661.4 413 79.7
MELO3C005918.2 Cucumis melo HOM05D004491 ORTHO05D006742 6.1e-188 661.0 415 79.3
CsaV3_5G000130 Cucumis sativus L. HOM05D004491 ORTHO05D006742 1.0e-187 660.2 415 79.5
FAN27G1423 Fragaria x ananassa HOM05D004491 ORTHO05D006742 1.3e-187 659.8 415 79.5
FvH4_2g24580 Fragaria vesca HOM05D004491 ORTHO05D006742 2.3e-187 659.1 415 79.5
MD03G1274300 Malus domestica HOM05D004491 ORTHO05D006742 2.3e-187 659.1 415 78.6
Haze_04798 Corylus avellana HOM05D004491 ORTHO05D006742 5.1e-187 657.9 415 79.0
FAN15G2832 Fragaria x ananassa HOM05D004491 ORTHO05D006742 5.1e-187 657.9 415 79.3
FAN24G0196 Fragaria x ananassa HOM05D004491 ORTHO05D006742 1.5e-186 656.4 415 79.3
Sabra14G0101900 Salix brachista HOM05D004491 ORTHO05D006742 4.3e-186 654.8 415 78.1
Sed0005784 Sechium edule HOM05D004491 ORTHO05D006742 9.7e-186 653.7 415 79.5
Actinidia24287 Actinidia chinensis HOM05D004491 ORTHO05D006742 1.6e-185 652.9 415 77.8
Potri.014G135590 Populus trichocarpa HOM05D004491 ORTHO05D006742 1.6e-185 652.9 415 78.6
MD11G1296800 Malus domestica HOM05D004491 ORTHO05D006742 2.8e-185 652.1 415 77.8
Cpa.g.sc9.150 Carica papaya HOM05D004491 ORTHO05D006742 3.7e-185 651.7 413 78.7
Cfa006054 Carpinus fangiana HOM05D004491 ORTHO05D006742 4.8e-185 651.4 415 78.3
QL12p023667 Quercus lobata HOM05D004491 ORTHO05D006742 6.3e-185 651.0 413 78.0
Manes.05G069700 Manihot esculenta HOM05D004491 ORTHO05D006742 8.2e-185 650.6 415 79.0
CSS0018382 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 4.5e-183 644.8 415 77.3
TWI23G1267 Tripterygium wilfordii HOM05D004491 ORTHO05D006742 1.7e-182 642.9 415 77.3
Sed0015582 Sechium edule HOM05D004491 ORTHO05D006742 2.9e-182 642.1 415 77.8
Cc01_g20110 Coffea canephora HOM05D004491 ORTHO05D006742 1.1e-181 640.2 415 77.3
Nitab4.5_0003831g0010 Nicotiana tabacum HOM05D004491 ORTHO05D006742 1.1e-181 640.2 417 76.5
Aqoxy5G00601 Aquilegia oxysepala HOM05D004491 ORTHO05D006742 3.2e-181 638.6 415 75.4
Potri.002G213600 Populus trichocarpa HOM05D004491 ORTHO05D006742 3.2e-181 638.6 412 77.4
Eucgr.K03426 Eucalyptus grandis HOM05D004491 ORTHO05D006742 7.2e-181 637.5 415 76.1
Migut.F00598 Erythranthe guttata HOM05D004491 ORTHO05D006742 9.4e-181 637.1 415 75.9
Atru.chr5.1296 Acer truncatum HOM05D004491 ORTHO05D006742 2.7e-180 635.6 415 76.1
PGSC0003DMG400024040 Solanum tuberosum HOM05D004491 ORTHO05D006742 3.6e-180 635.2 415 75.7
Peaxi162Scf01039g00225 Petunia axillaris HOM05D004491 ORTHO05D006742 6.1e-180 634.4 416 76.7
Sabra02G0149400 Salix brachista HOM05D004491 ORTHO05D006742 7.9e-180 634.0 412 76.7
Sopen06g035830 Solanum pennellii HOM05D004491 ORTHO05D006742 1.0e-179 633.6 415 75.2
Nitab4.5_0002093g0130 Nicotiana tabacum HOM05D004491 ORTHO05D006742 1.4e-179 633.3 417 75.8
Solyc06g084440.3 Solanum lycopersicum HOM05D004491 ORTHO05D006742 1.4e-179 633.3 415 75.2
Rhsim13G0018200 Rhododendron simsii HOM05D004491 ORTHO05D006742 1.8e-179 632.9 416 76.4
Ciclev10011862m.g Citrus clementina HOM05D004491 ORTHO05D006742 5.1e-179 631.3 415 76.1
SalBow3G0026 Salvia bowleyana HOM05D004491 ORTHO05D006742 6.7e-179 630.9 413 76.5
TWI14G1187 Tripterygium wilfordii HOM05D004491 ORTHO05D006742 8.8e-179 630.6 415 75.9
vmacro09158 Vaccinium macrocarpon HOM05D004491 ORTHO05D006742 2.5e-178 629.0 414 75.4
Aa31LG10G16820 Aethionema arabicum HOM05D004491 ORTHO05D006742 3.3e-178 628.6 414 75.1
SGA_v2.0_scaffold44G16642 Striga asiatica HOM05D004491 ORTHO05D006742 7.4e-178 627.5 415 74.9
THA.LOC104817536 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 1.3e-177 626.7 415 74.7
TAR636G1438 Trochodendron aralioides HOM05D004491 ORTHO05D006742 1.7e-177 626.3 413 75.8
DCAR_012436 Daucus carota HOM05D004491 ORTHO05D006742 2.2e-177 625.9 416 75.2
PGR044G0382 Punica granatum HOM05D004491 ORTHO05D006742 1.8e-176 622.9 417 75.8
MSTRG.27268 Avicennia marina HOM05D004491 ORTHO05D006742 1.2e-175 620.2 415 74.5
SGA_v2.0_scaffold60G20898 Striga asiatica HOM05D004491 ORTHO05D006742 1.2e-175 620.2 447 70.2
Lsat_1_v5_gn_5_189841 Lactuca sativa HOM05D004491 ORTHO05D006742 2.6e-175 619.0 415 72.0
Nn3g21241 Nelumbo nucifera HOM05D004491 ORTHO05D006742 1.3e-174 616.7 416 74.8
Gorai.004G139800 Gossypium raimondii HOM05D004491 ORTHO05D006742 1.7e-174 616.3 415 74.5
Sp5g00520 Schrenkiella parvula HOM05D004491 ORTHO05D006742 2.2e-174 615.9 415 73.3
Gohir.D08G136600 Gossypium hirsutum HOM05D004491 ORTHO05D006742 3.8e-174 615.1 415 74.5
C04p30230 Brassica napus HOM05D004491 ORTHO05D006742 6.5e-174 614.4 415 72.8
BolC4t24555H Brassica oleracea HOM05D004491 ORTHO05D006742 6.5e-174 614.4 415 72.8
AT2G47970 Arabidopsis thaliana HOM05D004491 ORTHO05D006742 2.5e-173 612.5 415 73.3
AT3G63000 Arabidopsis thaliana HOM05D004491 ORTHO05D006742 3.2e-173 612.1 414 72.7
PSO170G1317 Papaver somniferum HOM05D004491 ORTHO05D006742 5.5e-173 611.3 416 72.1
BcaC02g10333 Brassica carinata HOM05D004491 ORTHO05D006742 7.2e-173 610.9 415 72.5
A04p00390 Brassica napus HOM05D004491 ORTHO05D006742 1.2e-172 610.1 415 72.5
Carub.0005s2965 Capsella rubella HOM05D004491 ORTHO05D006742 1.2e-172 610.1 414 72.2
Aa31LG1G29390 Aethionema arabicum HOM05D004491 ORTHO05D006742 2.1e-172 609.4 415 73.7
Thecc.01G288700 Theobroma cacao HOM05D004491 ORTHO05D006742 2.7e-172 609.0 415 73.5
BraA04t15757Z Brassica rapa HOM05D004491 ORTHO05D006742 3.6e-172 608.6 415 72.3
Gohir.A08G115800 Gossypium hirsutum HOM05D004491 ORTHO05D006742 3.6e-172 608.6 415 73.7
AL5G45780 Arabidopsis lyrata HOM05D004491 ORTHO05D006742 7.9e-172 607.4 414 72.7
PSO407G0423 Papaver somniferum HOM05D004491 ORTHO05D006742 7.9e-172 607.4 416 72.1
AL4G47560 Arabidopsis lyrata HOM05D004491 ORTHO05D006742 1.8e-171 606.3 415 72.5
BcaB02g08082 Brassica carinata HOM05D004491 ORTHO05D006742 1.8e-171 606.3 415 72.0
ECA248G1403 Erigeron canadensis HOM05D004491 ORTHO05D006742 2.3e-171 605.9 416 71.9
Thhalv10001466m.g Eutrema salsugineum HOM05D004491 ORTHO05D006742 5.1e-171 604.7 415 72.3
Ah.02g115120 Amaranthus hybridus HOM05D004491 ORTHO05D006742 1.1e-170 603.6 419 72.6
Duzib211G0578 Durio zibethinus HOM05D004491 ORTHO05D006742 2.0e-170 602.8 415 72.3
Gorai.008G007400 Gossypium raimondii HOM05D004491 ORTHO05D006742 3.3e-170 602.1 415 72.5
CARHR173290 Cardamine hirsuta HOM05D004491 ORTHO05D006742 4.4e-170 601.7 414 72.0
Oeu022805.1 Olea europaea HOM05D004491 ORTHO05D006742 5.7e-170 601.3 458 67.2
Gohir.A12G007800 Gossypium hirsutum HOM05D004491 ORTHO05D006742 9.7e-170 600.5 415 72.0
Hund18024 Selenicereus undatus HOM05D004491 ORTHO05D006742 9.7e-170 600.5 419 71.8
HanXRQChr11g0334841 Helianthus annuus HOM05D004491 ORTHO05D006742 2.2e-169 599.4 415 70.8
MSTRG.8371 Avicennia marina HOM05D004491 ORTHO05D006742 6.3e-169 597.8 415 72.0
unitig_37.g12470 Utricularia gibba HOM05D004491 ORTHO05D006742 1.1e-168 597.0 416 72.1
ATR0706G070 Amborella trichopoda HOM05D004491 ORTHO05D006742 1.8e-168 596.3 413 71.7
Gohir.D12G007200 Gossypium hirsutum HOM05D004491 ORTHO05D006742 3.1e-168 595.5 415 71.6
vmacro09175 Vaccinium macrocarpon HOM05D004491 ORTHO05D006742 3.5e-167 592.0 481 64.4
CSS0045203 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 5.9e-167 591.3 415 70.1
Sp4g29890 Schrenkiella parvula HOM05D004491 ORTHO05D006742 1.0e-166 590.5 412 71.8
CDE01G0135 Ceratophyllum demersum HOM05D004491 ORTHO05D006742 1.3e-166 590.1 415 70.4
CDE12G0180 Ceratophyllum demersum HOM05D004491 ORTHO05D006742 1.5e-165 586.6 415 69.6
AUR62043003 Chenopodium quinoa HOM05D004491 ORTHO05D006742 9.4e-165 583.9 419 69.5
MBI19_g09851_MAGBIO Magnolia biondii HOM05D004491 ORTHO05D006742 4.7e-164 581.6 421 71.0
Dinv32984 Davidia involucrata HOM05D004682 ORTHO05D006197 3.0e-163 578.9 378 75.7
SEGI_03905 Sequoiadendron giganteum HOM05D004491 ORTHO05D006742 5.2e-163 578.2 413 69.0
TAR365G0641 Trochodendron aralioides HOM05D004491 ORTHO05D006742 2.0e-162 576.2 413 70.0
EL10Ac5g11643 Beta vulgaris HOM05D004491 ORTHO05D006742 1.8e-160 569.7 469 63.3
Lj1C40T6 Lonicera japonica HOM05D004491 ORTHO05D006742 9.1e-160 567.4 511 60.5
HPP92_001332 Vanilla planifolia HOM05D004491 ORTHO05D006742 1.2e-156 557.0 419 66.1
SHI15482 Sapria himalayana HOM05D004491 ORTHO05D006742 3.5e-151 538.9 432 63.7
COL.COLO4_08043 Corchorus olitorius HOM05D004491 ORTHO05D006742 9.4e-149 530.8 351 74.9
Mapoly0023s0134 Marchantia polymorpha HOM05D004491 ORTHO05D006742 1.8e-147 526.6 412 65.0
AagrBONN_evm.TU.Sc2ySwM_228.2306 Anthoceros agrestis HOM05D004491 ORTHO05D006742 4.0e-139 498.8 412 61.2
CAN.G1209.44 Capsicum annuum HOM05D004491 ORTHO05D006742 1.3e-137 493.8 307 78.5
Pp3c4_25410 Physcomitrium patens HOM05D004491 ORTHO05D006742 1.3e-137 493.8 413 60.0
Sc05g0004670 Simmondsia chinensis HOM05D004491 ORTHO05D006742 4.9e-137 491.9 334 74.3
Duzib133G1404 Durio zibethinus HOM05D004491 ORTHO05D006742 5.4e-136 488.4 331 73.4
SMO011G0024 Selaginella moellendorffii HOM05D004491 ORTHO05D006742 4.4e-130 468.8 412 58.7
CSS0029376 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 4.9e-129 465.3 351 67.2
Os01g0377700 Oryza sativa ssp. japonica HOM05D004491 ORTHO05D006742 3.2e-128 462.6 420 58.6
AUR62034024 Chenopodium quinoa HOM05D004491 ORTHO05D006742 5.0e-126 455.3 336 69.0
Zm00001eb366640 Zea mays HOM05D004491 ORTHO05D006742 2.3e-123 446.4 419 56.6
Zm00001eb146560 Zea mays HOM05D004491 ORTHO05D006742 2.2e-121 439.9 419 55.8
THA.LOC104820469 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 5.8e-106 388.7 236 83.1
PSO384G1012 Papaver somniferum HOM05D004491 ORTHO05D006742 4.6e-103 379.0 244 75.4
PRCOL_00001630 Prasinoderma coloniale HOM05D004491 ORTHO05D006742 3.0e-78 296.6 434 42.2
MCO03G089 Micromonas commoda HOM05D004491 ORTHO05D006742 2.0e-74 283.9 392 43.9
THA.LOC104799698 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 5.0e-73 279.3 182 75.3
Duzib147G1201 Durio zibethinus HOM05D004491 ORTHO05D006742 2.8e-68 263.5 238 58.8
Cre06.g293051 Chlamydomonas reinhardtii HOM05D000780 ORTHO05D001132 2.0e-61 240.7 333 43.2
Aa31sc35G70 Aethionema arabicum HOM05D004491 ORTHO05D006742 5.0e-57 226.1 186 64.0
Actinidia00704 Actinidia chinensis HOM05D004491 ORTHO05D019493 8.0e-47 192.2 257 47.1
GSVIVG01011019001 Vitis vinifera HOM05D004491 ORTHO05D006742 4.0e-46 189.9 115 79.1
BcaB02g07304 Brassica carinata HOM05D004491 ORTHO05D091651 1.2e-34 151.8 221 42.1
Zm00001eb098320 Zea mays HOM05D004491 ORTHO05D006742 6.5e-33 146.0 126 57.9
AUR62034023 Chenopodium quinoa HOM05D004491 ORTHO05D019493 1.5e-29 134.8 86 70.9
Sopen08g018880 Solanum pennellii HOM05D004491 ORTHO05D006742 2.7e-26 124.0 80 75.0
SEGI_06416 Sequoiadendron giganteum HOM05D004491 ORTHO05D019493 4.5e-26 123.2 84 66.7
Actinidia28542 Actinidia chinensis HOM05D004491 ORTHO05D057841 9.5e-24 115.5 184 41.3
Gohir.A04G054626 Gossypium hirsutum HOM05D004491 ORTHO05D019493 2.8e-23 114.0 83 67.5
Gohir.A11G248600 Gossypium hirsutum HOM05D004491 ORTHO05D019493 2.8e-23 114.0 90 62.2
BcaC08g45254 Brassica carinata HOM05D004491 ORTHO05D032214 5.2e-22 109.8 74 66.2
C08p37710 Brassica napus HOM05D004491 ORTHO05D031847 5.2e-22 109.8 91 62.6
BolC6t38019H Brassica oleracea HOM05D004491 ORTHO05D032214 5.2e-22 109.8 74 66.2
BolC8t51354H Brassica oleracea HOM05D004491 ORTHO05D031847 5.2e-22 109.8 91 62.6
C06p28510 Brassica napus HOM05D004491 ORTHO05D032214 3.4e-21 107.1 74 64.9
BcaC07g40782 Brassica carinata HOM05D004491 ORTHO05D031847 2.2e-20 104.4 91 61.5
SHI00898 Sapria himalayana HOM05D004491 ORTHO05D019493 8.6e-17 92.4 73 57.5
BcaC07g42722 Brassica carinata HOM05D004491 ORTHO05D095981 5.6e-16 89.7 66 59.1
HPP92_013688 Vanilla planifolia HOM05D004491 ORTHO05D006742 3.6e-15 87.0 82 56.1
SHI19086 Sapria himalayana HOM05D004491 ORTHO05D019493 5.2e-14 83.2 59 66.1
BcaC07g42719 Brassica carinata HOM05D004491 ORTHO05D094938 2.6e-13 80.9 67 58.2
BolC6t38020H Brassica oleracea HOM05D004491 ORTHO05D040597 8.3e-12 75.9 115 41.7
C06p28520 Brassica napus HOM05D004491 ORTHO05D040597 1.1e-11 75.5 115 40.9
CAN.G1682.2 Capsicum annuum HOM05D011687 ORTHO05D014163 2.7e-10 70.9 86 47.7


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