Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0001041 Lotus japonicus HOM05D010129 ORTHO05D008996 7.8e-112 407.1 205 100.0
Phvul.009G173300 Phaseolus vulgaris HOM05D010129 ORTHO05D008996 2.1e-48 196.4 204 54.9
Glyma.04G188600 Glycine max HOM05D010129 ORTHO05D008996 3.9e-47 192.2 210 53.3
Phvul.003G205500 Phaseolus vulgaris HOM05D000885 ORTHO05D008996 5.9e-43 178.3 206 49.0
Glyma.06G177000 Glycine max HOM05D010129 ORTHO05D008996 3.2e-41 172.6 169 54.4
Lj4g0006123 Lotus japonicus HOM05D000885 ORTHO05D008996 1.5e-38 163.7 208 49.0
Cfa019224 Carpinus fangiana HOM05D000885 ORTHO05D008996 3.3e-38 162.5 207 44.9
Glyma.17G124400 Glycine max HOM05D000885 ORTHO05D008996 1.3e-37 160.6 203 46.8
VMungo1215G0788 Vigna mungo HOM05D000885 ORTHO05D008996 6.3e-37 158.3 193 47.7
Lalb_Chr12g0201911 Lupinus albus HOM05D000885 ORTHO05D008996 4.1e-36 155.6 205 46.8
Lalb_Chr07g0182991 Lupinus albus HOM05D000885 ORTHO05D008996 4.5e-35 152.1 203 44.3
QL10p006845 Quercus lobata HOM05D000885 ORTHO05D008996 5.9e-35 151.8 212 43.9
Medtr4g104770 Medicago truncatula HOM05D000885 ORTHO05D008996 7.7e-35 151.4 205 46.8
Ca_19418_v3 Cicer arietinum L. HOM05D000885 ORTHO05D008996 3.6e-32 142.5 206 44.2
VMungo1309G3046 Vigna mungo HOM05D015604 ORTHO05D008996 1.0e-31 141.0 182 48.4
Ca_16126_v3 Cicer arietinum L. HOM05D010129 ORTHO05D013305 2.3e-31 139.8 178 44.4
Ca_30303_v3 Cicer arietinum L. HOM05D010129 ORTHO05D013305 2.3e-31 139.8 178 44.4
TPR.G37502 Trifolium pratense HOM05D000885 ORTHO05D008996 5.2e-31 138.7 209 44.0
CiPaw.12G031400 Carya illinoinensis HOM05D000885 ORTHO05D008996 6.7e-31 138.3 210 41.4
Atru.chr9.2584 Acer truncatum HOM05D000885 ORTHO05D008996 2.6e-30 136.3 215 39.5
Dinv20596 Davidia involucrata HOM05D000885 ORTHO05D008996 2.6e-30 136.3 217 41.9
Haze_07592 Corylus avellana HOM05D000885 ORTHO05D008996 4.4e-30 135.6 196 42.3
PSO063G6095 Papaver somniferum HOM05D000885 ORTHO05D008996 4.4e-30 135.6 218 40.4
CiPaw.11G019200 Carya illinoinensis HOM05D000885 ORTHO05D008996 2.2e-29 133.3 207 40.6
GSVIVG01007639001 Vitis vinifera HOM05D000885 ORTHO05D008996 2.8e-29 132.9 203 42.9
Cc00_g26390 Coffea canephora HOM05D000885 ORTHO05D008996 1.4e-28 130.6 217 39.2
Dinv38523 Davidia involucrata HOM05D000885 ORTHO05D008996 1.4e-28 130.6 214 40.2
Manes.06G110900 Manihot esculenta HOM05D000885 ORTHO05D008996 2.4e-28 129.8 213 38.5
TAR629G0635 Trochodendron aralioides HOM05D000885 ORTHO05D008996 7.0e-28 128.3 220 40.9
Psat4g060640 Pisum sativum HOM05D000885 ORTHO05D008996 1.2e-27 127.5 211 41.7
TAR371G0994 Trochodendron aralioides HOM05D000885 ORTHO05D008996 1.2e-27 127.5 219 38.4
MD14G1171000 Malus domestica HOM05D000885 ORTHO05D008996 2.0e-27 126.7 207 39.6
RcHm_v2.0_Chr7g0192501 Rosa chinensis HOM05D000885 ORTHO05D008996 2.7e-27 126.3 206 40.3
MD06G1165500 Malus domestica HOM05D000885 ORTHO05D008996 4.5e-27 125.6 210 38.1
FvH4_5g06340 Fragaria vesca HOM05D000885 ORTHO05D008996 1.3e-26 124.0 206 39.8
FAN18G0237 Fragaria x ananassa HOM05D000885 ORTHO05D008996 1.3e-26 124.0 206 39.8
Actinidia19363 Actinidia chinensis HOM05D000885 ORTHO05D008996 1.7e-26 123.6 218 39.0
FAN13G1050 Fragaria x ananassa HOM05D000885 ORTHO05D008996 1.7e-26 123.6 206 39.8
CANSAT80G2717 Cannabis sativa HOM05D000885 ORTHO05D008996 2.2e-26 123.2 207 40.6
Lj9C442T3 Lonicera japonica HOM05D000885 ORTHO05D008996 2.2e-26 123.2 217 38.2
TAR622G0608 Trochodendron aralioides HOM05D000885 ORTHO05D008996 2.2e-26 123.2 217 40.6
FAN08G3554 Fragaria x ananassa HOM05D000885 ORTHO05D008996 5.0e-26 122.1 206 39.3
Nn4g22584 Nelumbo nucifera HOM05D000885 ORTHO05D008996 1.1e-25 120.9 218 36.2
Hma1.2p1_1092F.1_g255950 Hydrangea macrophylla HOM05D000885 ORTHO05D008996 1.5e-25 120.6 217 37.8
FAN04G1252 Fragaria x ananassa HOM05D000885 ORTHO05D008996 3.2e-25 119.4 206 38.8
Cpa.g.sc159.15 Carica papaya HOM05D000885 ORTHO05D008996 7.2e-25 118.2 213 37.6
Potri.012G086500 Populus trichocarpa HOM05D000885 ORTHO05D008996 7.2e-25 118.2 213 36.6
Thecc.03G026300 Theobroma cacao HOM05D000885 ORTHO05D008996 1.2e-24 117.5 230 36.1
DCAR_026175 Daucus carota HOM05D000885 ORTHO05D008996 4.7e-24 115.5 214 33.6
TWI14G0880 Tripterygium wilfordii HOM05D000885 ORTHO05D008996 4.7e-24 115.5 211 40.8
PSO754G0088 Papaver somniferum HOM05D000885 ORTHO05D008996 6.1e-24 115.2 181 40.9
Aqoxy3G01240 Aquilegia oxysepala HOM05D000885 ORTHO05D008996 1.8e-23 113.6 218 35.8
CsaV3_1G008860 Cucumis sativus L. HOM05D000885 ORTHO05D008996 2.3e-23 113.2 206 38.8
Sed0003121 Sechium edule HOM05D000885 ORTHO05D008996 2.3e-23 113.2 207 38.6
Manes.14G060400 Manihot esculenta HOM05D000885 ORTHO05D008996 5.2e-23 112.1 213 37.1
CSS0019047 Camellia sinensis var. sinensis HOM05D000885 ORTHO05D008996 8.8e-23 111.3 179 42.5
MSTRG.11498 Avicennia marina HOM05D000885 ORTHO05D008996 1.2e-22 110.9 219 36.1
Prupe.5G165100 Prunus persica HOM05D000885 ORTHO05D008996 5.7e-22 108.6 175 40.0
Ciclev10022143m.g Citrus clementina HOM05D000885 ORTHO05D008996 7.5e-22 108.2 176 36.9
Eucgr.K02787 Eucalyptus grandis HOM05D000885 ORTHO05D008996 1.7e-21 107.1 216 33.8
Actinidia16220 Actinidia chinensis HOM05D000885 ORTHO05D008996 2.2e-21 106.7 181 39.8
Rhsim08G0178100 Rhododendron simsii HOM05D000885 ORTHO05D008996 2.8e-21 106.3 239 36.4
SalBow5G1579 Salvia bowleyana HOM05D000885 ORTHO05D008996 8.3e-21 104.8 213 36.2
MSTRG.23169 Avicennia marina HOM05D000885 ORTHO05D008996 1.8e-20 103.6 217 35.0
vmacro19293 Vaccinium macrocarpon HOM05D000885 ORTHO05D008996 2.4e-20 103.2 182 40.1
Glyma.05G041800 Glycine max HOM05D010129 ORTHO05D008996 5.4e-20 102.1 129 44.2
Nn3g16685 Nelumbo nucifera HOM05D006734 ORTHO05D008580 5.4e-20 102.1 185 40.5
ECA232G2046 Erigeron canadensis HOM05D000885 ORTHO05D008996 9.1e-20 101.3 207 36.2
Nitab4.5_0000003g0830 Nicotiana tabacum HOM05D000885 ORTHO05D008996 1.2e-19 100.9 217 32.7
HanXRQChr10g0296021 Helianthus annuus HOM05D000885 ORTHO05D008996 3.5e-19 99.4 202 36.6
Nitab4.5_0008713g0010 Nicotiana tabacum HOM05D000885 ORTHO05D008996 1.7e-18 97.1 217 33.2
Oeu020883.2 Olea europaea HOM05D000885 ORTHO05D008996 1.7e-18 97.1 174 36.8
Sabra12G0061900 Salix brachista HOM05D000885 ORTHO05D008996 2.3e-18 96.7 193 35.2
Oeu036500.2 Olea europaea HOM05D000885 ORTHO05D008996 2.9e-18 96.3 180 39.4
Lsat_1_v5_gn_4_77360 Lactuca sativa HOM05D000885 ORTHO05D008996 3.8e-18 95.9 211 34.1
Peaxi162Scf00763g00438 Petunia axillaris HOM05D000885 ORTHO05D008996 3.8e-18 95.9 217 33.2
Hund02789 Selenicereus undatus HOM05D000885 ORTHO05D008996 3.8e-18 95.9 213 34.7
Solyc03g112160.3 Solanum lycopersicum HOM05D000885 ORTHO05D008996 6.5e-18 95.1 218 33.9
PGSC0003DMG400018127 Solanum tuberosum HOM05D000885 ORTHO05D008996 1.5e-17 94.0 218 33.5
CAN.G993.19 Capsicum annuum HOM05D000885 ORTHO05D008996 2.5e-17 93.2 219 32.9
PGSC0003DMG400027072 Solanum tuberosum HOM05D000885 ORTHO05D008996 2.5e-17 93.2 217 32.7
ClCG03G003020 Citrullus lanatus HOM05D000885 ORTHO05D008996 4.2e-17 92.4 171 36.3
Nitab4.5_0002522g0010 Nicotiana tabacum HOM05D000885 ORTHO05D008996 4.2e-17 92.4 182 34.6
Duzib205G1010 Durio zibethinus HOM05D000885 ORTHO05D008996 9.5e-17 91.3 212 34.9
Sopen06g028070 Solanum pennellii HOM05D000885 ORTHO05D008996 9.5e-17 91.3 217 32.7
Migut.O00162 Erythranthe guttata HOM05D000885 ORTHO05D008996 1.2e-16 90.9 217 30.4
HanXRQChr16g0504731 Helianthus annuus HOM05D000885 ORTHO05D008996 1.2e-16 90.9 169 37.9
MBI10_g11212_MAGBIO Magnolia biondii HOM05D000885 ORTHO05D008996 1.6e-16 90.5 177 36.2
Nitab4.5_0008913g0040 Nicotiana tabacum HOM05D000885 ORTHO05D008996 2.1e-16 90.1 183 33.9
Solyc06g071780.4 Solanum lycopersicum HOM05D000885 ORTHO05D008996 2.8e-16 89.7 219 32.9
EL10Ac5g10650 Beta vulgaris HOM05D000885 ORTHO05D008996 8.0e-16 88.2 212 35.4
Medtr2g028420 Medicago truncatula HOM05D010129 ORTHO05D013305 8.0e-16 88.2 204 33.3
AUR62028721 Chenopodium quinoa HOM05D000885 ORTHO05D008996 1.8e-15 87.0 214 35.0
AUR62008139 Chenopodium quinoa HOM05D000885 ORTHO05D008996 2.3e-15 86.7 216 36.6
CAN.G338.44 Capsicum annuum HOM05D000885 ORTHO05D008996 3.0e-15 86.3 215 32.6
SGA_v2.0_scaffold25G10795 Striga asiatica HOM05D000885 ORTHO05D008996 6.8e-15 85.1 157 35.7
Psat5g118280 Pisum sativum HOM05D010129 ORTHO05D013305 5.7e-14 82.0 174 36.8
Psat5g118320 Pisum sativum HOM05D020197 ORTHO05D013305 1.3e-13 80.9 165 38.2
Sc10g0010220 Simmondsia chinensis HOM05D000885 ORTHO05D008996 2.2e-13 80.1 205 30.2
Psat5g118360 Pisum sativum HOM05D020197 ORTHO05D013305 1.1e-12 77.8 159 34.6
Sopen03g031250 Solanum pennellii HOM05D000885 ORTHO05D008996 1.1e-12 77.8 177 33.9
HPP92_023366 Vanilla planifolia HOM05D000885 ORTHO05D008996 2.4e-12 76.6 174 31.6
Medtr3g076880 Medicago truncatula HOM05D010129 ORTHO05D013305 5.4e-12 75.5 179 36.9
TPR.G30840 Trifolium pratense HOM05D010129 ORTHO05D013305 5.4e-12 75.5 184 32.6
Glyma.06G177200 Glycine max HOM05D010129 ORTHO05D008996 1.6e-11 73.9 93 44.1
arahy.Tifrunner.gnm1.ann1.AK3NNE Arachis hypogaea HOM05D067848 ORTHO05D038856 3.5e-11 72.8 187 38.0
Medtr1215s0010 Medicago truncatula HOM05D010129 ORTHO05D013305 1.0e-10 71.2 124 34.7
MD02G1231100 Malus domestica HOM05D000885 ORTHO05D008996 1.7e-10 70.5 117 36.8
Medtr3g076670 Medicago truncatula HOM05D010129 ORTHO05D013305 8.6e-10 68.2 170 33.5
Pp3c1_42090 Physcomitrium patens HOM05D000885 ORTHO05D008875 8.6e-10 68.2 194 29.4
Actinidia40341 Actinidia chinensis HOM05D000885 ORTHO05D001238 1.9e-09 67.0 206 29.6
Os01g0971100 Oryza sativa ssp. japonica HOM05D000885 ORTHO05D008996 1.9e-09 67.0 177 30.5
Nitab4.5_0000570g0330 Nicotiana tabacum HOM05D000885 ORTHO05D001238 2.5e-09 66.6 201 26.9
Thecc.04G293800 Theobroma cacao HOM05D000885 ORTHO05D001238 2.5e-09 66.6 219 31.1
Os05g0107900 Oryza sativa ssp. japonica HOM05D000885 ORTHO05D008996 2.1e-08 63.5 181 32.6
arahy.Tifrunner.gnm1.ann1.C5RG8M Arachis hypogaea HOM05D067848 ORTHO05D038856 6.1e-08 62.0 187 35.8
MBI18_g22703_MAGBIO Magnolia biondii HOM05D000885 ORTHO05D008996 6.1e-08 62.0 253 27.3
Pp3c14_18810 Physcomitrium patens HOM05D000885 ORTHO05D008875 6.1e-08 62.0 189 28.6
Zm00001eb139880 Zea mays HOM05D000885 ORTHO05D008996 6.1e-08 62.0 133 30.1
Manes.03G200800 Manihot esculenta HOM05D000885 ORTHO05D001238 8.0e-08 61.6 190 30.0
Pp3c2_1490 Physcomitrium patens HOM05D000885 ORTHO05D008875 1.4e-07 60.8 197 27.4
Duzib151G0920 Durio zibethinus HOM05D000885 ORTHO05D001238 2.3e-07 60.1 208 30.8
TAR365G0492 Trochodendron aralioides HOM05D000885 ORTHO05D001238 2.3e-07 60.1 184 28.3
Nn1g04213 Nelumbo nucifera HOM05D000885 ORTHO05D008875 8.9e-07 58.2 237 28.3
Sed0025212 Sechium edule HOM05D000885 ORTHO05D001238 8.9e-07 58.2 197 28.9
Actinidia25829 Actinidia chinensis HOM05D000885 ORTHO05D001238 1.2e-06 57.8 198 26.8
DCAR_005410 Daucus carota HOM05D000885 ORTHO05D001238 2.0e-06 57.0 219 26.0
Medtr3g076720 Medicago truncatula HOM05D010129 ORTHO05D013305 2.0e-06 57.0 136 31.6
CsaV3_1G038490 Cucumis sativus L. HOM05D000885 ORTHO05D001238 2.6e-06 56.6 227 26.4
SMO356G0068 Selaginella moellendorffii HOM05D000885 ORTHO05D008996 2.6e-06 56.6 185 28.6
CSS0020477 Camellia sinensis var. sinensis HOM05D000885 ORTHO05D001238 4.4e-06 55.8 186 25.8
CSS0027663 Camellia sinensis var. sinensis HOM05D000885 ORTHO05D001238 4.4e-06 55.8 186 25.8
Lsat_1_v5_gn_7_73641 Lactuca sativa HOM05D000885 ORTHO05D001238 4.4e-06 55.8 212 27.8
Zm00001eb130380 Zea mays HOM05D001942 ORTHO05D008996 4.4e-06 55.8 51 43.1
Potri.014G125500 Populus trichocarpa HOM05D000885 ORTHO05D001238 9.8e-06 54.7 224 25.9


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