Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 1.2e-86 323.2 163 100.0
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 9.1e-63 243.8 161 74.5
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 1.0e-61 240.4 161 74.5
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 8.5e-61 237.3 159 77.4
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 7.2e-60 234.2 161 75.8
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 2.1e-59 232.6 161 73.9
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 2.7e-59 232.3 161 73.9
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 2.6e-57 225.7 160 70.6
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 9.4e-52 207.2 150 68.0
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 1.6e-51 206.5 130 76.9
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 5.2e-50 201.4 186 58.1
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 8.8e-50 200.7 155 63.9
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 1.1e-49 200.3 161 61.5
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 1.5e-49 199.9 158 66.5
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 1.5e-49 199.9 153 64.1
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 1.1e-47 193.7 163 62.6
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 1.8e-47 193.0 162 61.7
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 2.4e-47 192.6 177 60.5
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 4.1e-47 191.8 161 60.9
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 9.1e-47 190.7 165 59.4
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 1.6e-46 189.9 146 62.3
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 1.6e-46 189.9 127 70.9
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 2.0e-46 189.5 121 76.0
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 3.5e-46 188.7 162 61.1
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 1.7e-45 186.4 132 68.9
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 2.2e-45 186.0 127 71.7
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 2.9e-45 185.7 161 60.2
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 5.0e-45 184.9 154 59.7
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 5.0e-45 184.9 160 61.2
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 6.5e-45 184.5 135 65.9
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 1.1e-44 183.7 151 65.6
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 2.5e-44 182.6 155 60.0
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 2.5e-44 182.6 155 58.7
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 4.2e-44 181.8 129 68.2
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 5.5e-44 181.4 136 64.0
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 9.4e-44 180.6 151 62.9
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 1.2e-43 180.3 156 63.5
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 1.6e-43 179.9 150 63.3
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 2.7e-43 179.1 109 79.8
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 6.1e-43 177.9 165 61.8
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 6.1e-43 177.9 142 64.8
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 8.0e-43 177.6 151 63.6
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 8.0e-43 177.6 155 60.0
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 1.4e-42 176.8 165 61.2
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 1.8e-42 176.4 120 73.3
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 2.3e-42 176.0 165 61.2
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 3.0e-42 175.6 120 73.3
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 4.0e-42 175.3 163 55.2
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 1.2e-41 173.7 123 71.5
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 1.2e-41 173.7 157 61.8
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 1.5e-41 173.3 164 57.9
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 1.5e-41 173.3 169 60.9
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 3.4e-41 172.2 143 60.1
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 4.4e-41 171.8 141 64.5
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 5.7e-41 171.4 166 57.2
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 9.7e-41 170.6 164 54.9
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 9.7e-41 170.6 143 59.4
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 9.7e-41 170.6 143 59.4
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 9.7e-41 170.6 143 59.4
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 4.8e-40 168.3 155 57.4
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 1.1e-39 167.2 160 54.4
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 1.1e-39 167.2 156 58.3
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 1.4e-39 166.8 164 54.3
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 1.8e-39 166.4 138 60.1
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 2.4e-39 166.0 164 55.5
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 3.1e-39 165.6 164 53.7
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 3.1e-39 165.6 160 55.0
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 7.0e-39 164.5 161 52.8
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 3.5e-38 162.2 109 75.2
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 4.5e-38 161.8 147 57.1
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 1.3e-37 160.2 109 72.5
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 1.7e-37 159.8 138 60.9
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 2.2e-37 159.5 154 60.4
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 5.0e-37 158.3 108 73.1
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 1.9e-36 156.4 161 52.2
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 4.2e-36 155.2 118 66.9
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 5.5e-36 154.8 100 74.0
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 5.5e-36 154.8 100 73.0
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 5.5e-36 154.8 100 73.0
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 9.4e-36 154.1 110 70.0
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 6.1e-35 151.4 110 68.2
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 6.1e-35 151.4 157 54.8
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 3.4e-33 145.6 118 61.0
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 9.8e-33 144.1 142 61.3
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 1.3e-32 143.7 119 58.0
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 1.3e-32 143.7 119 57.1
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 1.7e-32 143.3 151 50.3
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 2.2e-32 142.9 101 65.3
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 1.8e-31 139.8 128 59.4
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 2.7e-30 136.0 99 72.7
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 4.5e-30 135.2 109 64.2
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 7.7e-30 134.4 109 64.2
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 1.3e-29 133.7 104 64.4
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 8.6e-29 131.0 109 62.4
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 4.0e-26 122.1 97 61.9
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 6.8e-26 121.3 128 53.9
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 3.4e-25 119.0 87 67.8
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 1.1e-12 77.4 79 53.2
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 5.2e-10 68.6 68 57.4
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 2.2e-08 63.2 98 42.9
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 8.3e-08 61.2 90 37.8
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 1.4e-07 60.5 100 35.0


User provided reference genes

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