Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0000151 Lotus japonicus HOM05D005511 ORTHO05D006616 0.0e+00 1291.2 690 100.0
Lalb_Chr25g0287701 Lupinus albus HOM05D005511 ORTHO05D006616 5.9e-305 1050.4 703 78.1
Phvul.001G199500 Phaseolus vulgaris HOM05D005511 ORTHO05D006616 2.2e-304 1048.5 703 79.5
Glyma.12G151100 Glycine max HOM05D005511 ORTHO05D006616 1.9e-303 1045.4 706 78.8
Glyma.17G079400 Glycine max HOM05D005511 ORTHO05D006616 2.6e-300 1035.0 712 78.1
VMungo1383G1052 Vigna mungo HOM05D005511 ORTHO05D006616 3.7e-299 1031.2 705 79.1
TPR.G32311 Trifolium pratense HOM05D005511 ORTHO05D006616 1.3e-291 1006.1 703 76.0
arahy.Tifrunner.gnm1.ann1.Q5NSRJ Arachis hypogaea HOM05D005511 ORTHO05D006616 5.4e-290 1000.7 704 77.7
Ca_09096_v3 Cicer arietinum L. HOM05D005511 ORTHO05D006616 9.5e-287 989.9 703 75.8
Medtr1g092770 Medicago truncatula HOM05D005511 ORTHO05D006616 1.2e-286 989.6 702 77.1
arahy.Tifrunner.gnm1.ann1.V3D0DH Arachis hypogaea HOM05D005511 ORTHO05D006616 2.7e-281 971.8 735 73.5
Psat5g176520 Pisum sativum HOM05D005511 ORTHO05D006616 1.0e-280 969.9 701 75.0
QL12p025629 Quercus lobata HOM05D005511 ORTHO05D006616 9.2e-250 867.1 707 67.6
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 2.4e-237 825.9 708 66.1
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 1.5e-236 823.2 708 64.4
Cfa013295 Carpinus fangiana HOM05D005511 ORTHO05D006616 3.4e-236 822.0 710 66.5
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 3.8e-235 818.5 706 64.6
Sed0022409 Sechium edule HOM05D005511 ORTHO05D006616 2.3e-232 809.3 700 64.0
TWI34G0645 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 1.1e-229 800.4 714 64.6
CiPaw.07G210700 Carya illinoinensis HOM05D005511 ORTHO05D006616 1.8e-229 799.7 699 64.9
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 8.4e-227 790.8 703 62.3
ClCG05G026390 Citrullus lanatus HOM05D005511 ORTHO05D006616 4.2e-226 788.5 702 62.8
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 4.2e-226 788.5 704 64.1
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 1.0e-224 783.9 694 63.5
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 1.0e-224 783.9 704 63.8
Dinv38802 Davidia involucrata HOM05D005511 ORTHO05D006616 1.3e-224 783.5 694 65.3
Eucgr.H04509 Eucalyptus grandis HOM05D005511 ORTHO05D006616 3.0e-224 782.3 697 64.4
Cpa.g.sc81.17 Carica papaya HOM05D005511 ORTHO05D006616 4.3e-223 778.5 708 63.8
CSS0031635 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 6.9e-221 771.2 698 65.0
Hma1.2p1_1470F.1_g285590 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 9.0e-221 770.8 697 62.8
TWI32G1116 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 3.4e-220 768.8 708 62.7
TAR624G0177 Trochodendron aralioides HOM05D005511 ORTHO05D006616 7.6e-220 767.7 714 62.2
GSVIVG01014608001 Vitis vinifera HOM05D005511 ORTHO05D006616 4.9e-219 765.0 703 63.3
Duzib168G0441 Durio zibethinus HOM05D005511 ORTHO05D006616 6.5e-219 764.6 703 62.0
GSVIVG01029743001 Vitis vinifera HOM05D005511 ORTHO05D006616 2.5e-218 762.7 697 62.3
MD08G1126000 Malus domestica HOM05D005511 ORTHO05D006616 1.9e-215 753.1 712 65.3
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 3.3e-215 752.3 715 60.3
Actinidia31365 Actinidia chinensis HOM05D005511 ORTHO05D006616 3.2e-210 735.7 700 61.4
Nitab4.5_0013218g0030 Nicotiana tabacum HOM05D005511 ORTHO05D006616 3.0e-208 729.2 702 60.1
Potri.018G002000 Populus trichocarpa HOM05D005511 ORTHO05D006616 4.3e-207 725.3 652 63.5
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 2.2e-206 723.0 712 64.3
DCAR_027476 Daucus carota HOM05D005511 ORTHO05D006616 2.0e-204 716.5 739 57.6
Sopen10g032680 Solanum pennellii HOM05D005511 ORTHO05D006616 4.5e-204 715.3 702 59.1
CAN.G841.12 Capsicum annuum HOM05D005511 ORTHO05D006616 1.3e-203 713.8 707 58.4
Solyc10g083200.2 Solanum lycopersicum HOM05D005511 ORTHO05D006616 2.9e-203 712.6 702 58.8
Nitab4.5_0001801g0060 Nicotiana tabacum HOM05D005511 ORTHO05D006616 5.0e-203 711.8 702 59.1
PGR142G1479 Punica granatum HOM05D005511 ORTHO05D006616 6.5e-203 711.4 699 59.8
CAN.G423.39 Capsicum annuum HOM05D005511 ORTHO05D006616 1.1e-202 710.7 709 58.3
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 1.4e-202 710.3 695 60.3
PGSC0003DMG400028246 Solanum tuberosum HOM05D005511 ORTHO05D006616 4.2e-202 708.8 701 58.8
Manes.03G000300 Manihot esculenta HOM05D005511 ORTHO05D006616 1.6e-201 706.8 702 60.1
Peaxi162Scf00096g01112 Petunia axillaris HOM05D005511 ORTHO05D006616 1.6e-201 706.8 707 58.8
Cc03_g10050 Coffea canephora HOM05D005511 ORTHO05D006616 2.7e-201 706.1 706 58.8
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 7.9e-201 704.5 699 57.9
Prupe.1G457600 Prunus persica HOM05D005511 ORTHO05D006616 5.1e-200 701.8 702 59.1
AT4G31200 Arabidopsis thaliana HOM05D005511 ORTHO05D006616 2.6e-199 699.5 712 57.7
PSO541G5250 Papaver somniferum HOM05D005511 ORTHO05D006616 2.2e-198 696.4 717 59.1
Hund14329 Selenicereus undatus HOM05D005511 ORTHO05D006616 1.4e-197 693.7 712 57.9
Carub.0007s0934 Capsella rubella HOM05D005511 ORTHO05D006616 3.8e-195 685.6 704 56.7
Thhalv10024645m.g Eutrema salsugineum HOM05D005511 ORTHO05D006616 3.8e-195 685.6 697 58.1
Peaxi162Scf01013g00235 Petunia axillaris HOM05D005511 ORTHO05D006616 6.5e-195 684.9 708 57.8
AL7G20880 Arabidopsis lyrata HOM05D005511 ORTHO05D006616 5.5e-194 681.8 696 57.2
MELO3C018377.2 Cucumis melo HOM05D005511 ORTHO05D006616 7.2e-194 681.4 553 64.9
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 8.0e-193 677.9 694 57.8
CARHR239100 Cardamine hirsuta HOM05D005511 ORTHO05D006616 1.4e-192 677.2 710 56.5
THA.LOC104819918 Tarenaya hassleriana HOM05D005511 ORTHO05D006616 2.3e-192 676.4 707 56.9
Ah.07g201420 Amaranthus hybridus HOM05D005511 ORTHO05D006616 3.0e-192 676.0 704 57.1
Rhsim04G0157200 Rhododendron simsii HOM05D005511 ORTHO05D006616 3.0e-192 676.0 696 58.5
Oeu001428.2 Olea europaea HOM05D005511 ORTHO05D006616 3.9e-192 675.6 711 56.8
Nitab4.5_0000167g0180 Nicotiana tabacum HOM05D005511 ORTHO05D006616 5.2e-192 675.2 700 56.9
Oeu009791.1 Olea europaea HOM05D005511 ORTHO05D006616 6.7e-192 674.9 703 56.9
Aa31LG11G2310 Aethionema arabicum HOM05D005511 ORTHO05D006616 3.3e-191 672.5 699 57.1
Lsat_1_v5_gn_4_32681 Lactuca sativa HOM05D005511 ORTHO05D006616 4.4e-191 672.2 713 59.2
EL10Ac5g11907 Beta vulgaris HOM05D005511 ORTHO05D006616 2.9e-187 659.4 703 56.8
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 2.9e-187 659.4 641 58.7
ECA234G2010 Erigeron canadensis HOM05D005511 ORTHO05D006616 1.2e-185 654.1 675 59.0
Aqoxy4G02032 Aquilegia oxysepala HOM05D005511 ORTHO05D006616 1.6e-185 653.7 642 59.7
Sp7g29080 Schrenkiella parvula HOM05D005511 ORTHO05D006616 2.7e-185 652.9 699 55.9
HanXRQChr03g0093821 Helianthus annuus HOM05D005511 ORTHO05D006616 8.0e-185 651.4 696 57.0
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 2.2e-182 643.3 713 56.0
Oeu018783.1 Olea europaea HOM05D005511 ORTHO05D006616 3.7e-182 642.5 706 54.0
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 1.2e-180 637.5 705 54.9
A01p07040 Brassica napus HOM05D005511 ORTHO05D006616 2.2e-179 633.3 697 53.1
BcaC09g51902 Brassica carinata HOM05D005511 ORTHO05D006616 9.4e-178 627.9 694 53.7
C01p07790 Brassica napus HOM05D005511 ORTHO05D006616 1.2e-177 627.5 694 53.7
FAN15G0681 Fragaria x ananassa HOM05D005511 ORTHO05D006616 2.7e-177 626.3 573 61.4
AUR62007421 Chenopodium quinoa HOM05D005511 ORTHO05D006616 3.6e-177 625.9 706 54.1
CSS0032846 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 1.4e-176 624.0 696 57.2
BraA01t00656Z Brassica rapa HOM05D005511 ORTHO05D006616 4.0e-176 622.5 701 53.5
FvH4_2g36600 Fragaria vesca HOM05D005511 ORTHO05D006616 1.2e-175 620.9 603 59.4
MBI02_g34313_MAGBIO Magnolia biondii HOM05D005511 ORTHO05D006616 5.7e-175 618.6 685 55.9
BolC1t00765H Brassica oleracea HOM05D005511 ORTHO05D006616 1.1e-173 614.4 695 52.4
RcHm_v2.0_Chr6g0305221 Rosa chinensis HOM05D005511 ORTHO05D006616 4.1e-173 612.5 546 62.6
Sc03g0008920 Simmondsia chinensis HOM05D005511 ORTHO05D006616 4.1e-173 612.5 708 54.2
CDE06G2039 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 6.6e-171 605.1 704 53.0
Nitab4.5_0001579g0070 Nicotiana tabacum HOM05D005511 ORTHO05D006616 1.0e-168 597.8 750 50.4
FAN27G2128 Fragaria x ananassa HOM05D005511 ORTHO05D007122 5.4e-165 585.5 542 60.7
ATR1145G079 Amborella trichopoda HOM05D005511 ORTHO05D006616 7.0e-165 585.1 719 52.3
Migut.H02336 Erythranthe guttata HOM05D005511 ORTHO05D006616 2.3e-160 570.1 701 51.5
FAN20G1701 Fragaria x ananassa HOM05D005511 ORTHO05D007122 6.8e-160 568.5 545 58.9
ATR0686G209 Amborella trichopoda HOM05D005511 ORTHO05D006616 2.2e-158 563.5 716 50.3
Os06g0682700 Oryza sativa ssp. japonica HOM05D005511 ORTHO05D006616 2.7e-156 556.6 580 56.4
Lj3A264G15 Lonicera japonica HOM05D005511 ORTHO05D006616 4.4e-151 539.3 643 53.8
AUR62027311 Chenopodium quinoa HOM05D005511 ORTHO05D006616 7.3e-138 495.4 566 52.1
Mapoly0058s0003 Marchantia polymorpha HOM05D005511 ORTHO05D006616 1.3e-134 484.6 681 46.4
SGA_v2.0_scaffold188G40311 Striga asiatica HOM05D005511 ORTHO05D006616 1.4e-133 481.1 571 52.2
Sc03g0008950 Simmondsia chinensis HOM05D005511 ORTHO05D006616 1.9e-133 480.7 514 55.4
Pp3c17_14220 Physcomitrium patens HOM05D005511 ORTHO05D006616 2.1e-132 477.2 695 45.0
Nn1g03658 Nelumbo nucifera HOM05D005511 ORTHO05D006616 3.9e-131 473.0 436 63.3
unitig_32.g11169 Utricularia gibba HOM05D005511 ORTHO05D006616 6.4e-126 455.7 621 48.6
Sabra06G0216900 Salix brachista HOM05D005511 ORTHO05D006616 3.0e-115 420.2 358 65.6
Atru.chr7.2703 Acer truncatum HOM05D005511 ORTHO05D006616 6.9e-112 409.1 331 66.5
Haze_21772 Corylus avellana HOM05D005511 ORTHO05D006616 1.5e-111 407.9 333 66.4
Zm00001eb273620 Zea mays HOM05D005511 ORTHO05D006616 1.3e-105 388.3 400 57.5
Hma1.2p1_0379F.1_g139860 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 1.0e-102 378.6 324 63.3
Atru.chr7.2702 Acer truncatum HOM05D005511 ORTHO05D006616 2.2e-102 377.5 355 61.4
Haze_21773 Corylus avellana HOM05D005511 ORTHO05D006616 3.5e-100 370.2 353 60.6
SMO147G0244 Selaginella moellendorffii HOM05D005511 ORTHO05D006616 5.7e-98 362.8 652 44.3
CBR_g29483 Chara braunii HOM05D000785 ORTHO05D006616 4.1e-88 330.1 861 33.3
CBR_g44445 Chara braunii HOM05D005511 ORTHO05D006616 1.0e-86 325.5 904 33.5
SEGI_09992 Sequoiadendron giganteum HOM05D005511 ORTHO05D006616 2.3e-75 287.7 370 48.4
SHI01952 Sapria himalayana HOM05D005511 ORTHO05D006616 9.1e-72 275.8 377 48.0
Sabra06G0216800 Salix brachista HOM05D005511 ORTHO05D006616 4.4e-66 256.9 333 55.6
VMungo1383G0863 Vigna mungo HOM05D005511 ORTHO05D006616 9.8e-66 255.8 142 90.1
SHI01951 Sapria himalayana HOM05D000002 ORTHO05D000001 8.5e-62 242.7 329 50.8
MELO3C003615.2 Cucumis melo HOM05D005511 ORTHO05D006616 8.3e-57 226.1 217 58.1
AagrBONN_evm.TU.Sc2ySwM_228.1219 Anthoceros agrestis HOM05D005511 ORTHO05D006616 5.9e-55 219.9 415 39.5
ATR0686G036 Amborella trichopoda HOM05D005511 ORTHO05D006616 2.1e-52 211.5 300 48.0
Psat6g134200 Pisum sativum HOM05D005511 ORTHO05D006616 1.2e-47 195.7 137 77.4
unitig_748.g7741 Utricularia gibba HOM05D005511 ORTHO05D006616 1.8e-43 181.8 287 42.2
Actinidia34689 Actinidia chinensis HOM05D005511 ORTHO05D006616 1.4e-40 172.2 212 50.9
Nitab4.5_0000365g0090 Nicotiana tabacum HOM05D005511 ORTHO05D006616 4.6e-39 167.2 128 68.8
CDE06G0583 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 1.1e-37 162.5 183 47.5
CANSAT21G0937 Cannabis sativa HOM05D005511 ORTHO05D006616 1.7e-30 138.7 158 48.7
ATR1145G067 Amborella trichopoda HOM05D005511 ORTHO05D006616 1.9e-29 135.2 275 37.8
Cre04.g222300 Chlamydomonas reinhardtii HOM05D005511 ORTHO05D006616 4.0e-19 100.9 401 29.4
Sc03g0008960 Simmondsia chinensis HOM05D005511 ORTHO05D006616 6.4e-17 93.6 150 47.3
PGSC0003DMG400027627 Solanum tuberosum HOM05D005511 ORTHO05D006616 2.8e-12 78.2 61 67.2
Actinidia02692 Actinidia chinensis HOM05D005511 ORTHO05D006616 4.5e-10 70.9 107 47.7
Pp3c6_280 Physcomitrium patens HOM05D000251 ORTHO05D007889 2.4e-08 65.1 113 38.1
PRCOL_00003511 Prasinoderma coloniale HOM05D005511 ORTHO05D006616 1.3e-06 59.3 60 45.0


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