Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P63T41 Lonicera japonica HOM05D000003 ORTHO05D000022 3.6e-87 324.7 147 100.0
Sabra01G0000100 Salix brachista HOM05D000003 ORTHO05D000004 2.3e-12 76.3 143 33.6
Sopen09g016340 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-11 73.9 138 31.2
Sopen09g012310 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-11 73.2 138 31.2
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 2.5e-11 72.8 137 29.9
Sabra06G0000400 Salix brachista HOM05D000003 ORTHO05D000004 3.3e-11 72.4 143 32.9
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-10 70.1 134 31.3
TWI74G1532 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.8e-10 69.3 132 31.1
PGSC0003DMG400015911 Solanum tuberosum HOM05D000003 ORTHO05D001389 8.0e-10 67.8 144 31.2
SGA_v2.0_scaffold61G21206 Striga asiatica HOM05D000003 ORTHO05D000006 8.0e-10 67.8 146 30.8
Thecc.04G000100 Theobroma cacao HOM05D000024 ORTHO05D000006 1.0e-09 67.4 134 29.9
Sopen00g012040 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-09 67.0 138 30.4
Sabra11G0000200 Salix brachista HOM05D000155 ORTHO05D000022 6.8e-09 64.7 149 34.9
Thecc.02G366600 Theobroma cacao HOM05D000003 ORTHO05D000006 6.8e-09 64.7 134 26.1
Cc00_g07050 Coffea canephora HOM05D000003 ORTHO05D000004 1.5e-08 63.5 139 25.2
MBI02_g40095_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 7.5e-08 61.2 119 31.1
CiPaw.04G137600 Carya illinoinensis HOM05D000155 ORTHO05D000022 1.3e-07 60.5 139 28.1
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 2.2e-07 59.7 120 30.0
MBI05_g23299_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.7e-07 58.9 132 28.0
Thecc.03G325600 Theobroma cacao HOM05D000003 ORTHO05D000006 4.9e-07 58.5 132 28.0
MBI09_g08665_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.3e-07 57.8 121 28.9
Cc11_g02100 Coffea canephora HOM05D000003 ORTHO05D000022 1.9e-06 56.6 130 22.3
PGSC0003DMG402031434 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.9e-06 56.6 152 27.6
MBI15_g26833_MAGBIO Magnolia biondii HOM05D000669 ORTHO05D000022 2.4e-06 56.2 126 28.6
MBI02_g26231_MAGBIO Magnolia biondii HOM05D000103 ORTHO05D000022 3.2e-06 55.8 125 28.8
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 7.0e-06 54.7 116 25.9
PGSC0003DMG401032256 Solanum tuberosum HOM05D000003 ORTHO05D000004 7.0e-06 54.7 140 25.7


User provided reference genes

Program Settings