Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P130T21 Lonicera japonica HOM05D005995 ORTHO05D007362 9.2e-56 219.9 107 100.0
Dinv09649 Davidia involucrata HOM05D002227 ORTHO05D002337 4.4e-50 201.1 107 91.6
Haze_24375 Corylus avellana HOM05D005995 ORTHO05D007362 2.2e-49 198.7 107 90.7
Actinidia02782 Actinidia chinensis HOM05D005995 ORTHO05D007362 3.7e-49 198.0 107 90.7
Manes.17G003200 Manihot esculenta HOM05D005995 ORTHO05D007362 1.1e-48 196.4 107 88.8
Actinidia23218 Actinidia chinensis HOM05D005995 ORTHO05D007362 1.4e-48 196.1 107 88.8
CANSAT54G2854 Cannabis sativa HOM05D005995 ORTHO05D007362 1.9e-48 195.7 106 87.7
GSVIVG01024692001 Vitis vinifera HOM05D005995 ORTHO05D007362 3.2e-48 194.9 107 89.7
Cfa011735 Carpinus fangiana HOM05D005995 ORTHO05D007362 7.1e-48 193.7 107 88.8
CiPaw.14G056700 Carya illinoinensis HOM05D005995 ORTHO05D007362 7.1e-48 193.7 107 88.8
Glyma.11G168600 Glycine max HOM05D005995 ORTHO05D007362 9.2e-48 193.4 107 86.9
Duzib170G0863 Durio zibethinus HOM05D005995 ORTHO05D007362 2.1e-47 192.2 107 86.9
Aqoxy4G02443 Aquilegia oxysepala HOM05D005995 ORTHO05D007362 2.7e-47 191.8 107 85.0
Cpa.g.sc2.418 Carica papaya HOM05D005995 ORTHO05D007362 2.7e-47 191.8 107 86.9
Cc01_g14560 Coffea canephora HOM05D005995 ORTHO05D007362 2.7e-47 191.8 107 87.9
VMungo0540G0986 Vigna mungo HOM05D005995 ORTHO05D007362 4.6e-47 191.0 107 86.0
HanXRQChr11g0334701 Helianthus annuus HOM05D005995 ORTHO05D007362 6.0e-47 190.7 107 86.9
QL01p039263 Quercus lobata HOM05D005995 ORTHO05D007362 6.0e-47 190.7 107 85.0
Thecc.09G353200 Theobroma cacao HOM05D005995 ORTHO05D007362 7.8e-47 190.3 107 86.0
COL.COLO4_11080 Corchorus olitorius HOM05D005995 ORTHO05D007362 1.3e-46 189.5 107 85.0
Eucgr.B02232 Eucalyptus grandis HOM05D005995 ORTHO05D007362 1.3e-46 189.5 107 85.0
Atru.chr3.4142 Acer truncatum HOM05D005995 ORTHO05D007362 1.7e-46 189.1 107 85.0
Ciclev10029374m.g Citrus clementina HOM05D005995 ORTHO05D007362 1.7e-46 189.1 107 86.0
Phvul.006G070800 Phaseolus vulgaris HOM05D005995 ORTHO05D007362 1.7e-46 189.1 107 85.0
Prupe.6G053100 Prunus persica HOM05D005995 ORTHO05D007362 1.7e-46 189.1 107 84.1
Lsat_1_v5_gn_5_173181 Lactuca sativa HOM05D005995 ORTHO05D007362 3.0e-46 188.3 107 84.1
Potri.001G279700 Populus trichocarpa HOM05D005995 ORTHO05D007362 3.0e-46 188.3 106 85.8
Potri.009G074400 Populus trichocarpa HOM05D005995 ORTHO05D007362 3.0e-46 188.3 107 85.0
Rhsim13G0066700 Rhododendron simsii HOM05D005995 ORTHO05D007362 3.0e-46 188.3 106 85.8
DCAR_015647 Daucus carota HOM05D005995 ORTHO05D007362 3.9e-46 188.0 107 87.9
Nn2g14523 Nelumbo nucifera HOM05D005995 ORTHO05D007362 3.9e-46 188.0 107 86.0
CiPaw.13G073700 Carya illinoinensis HOM05D005995 ORTHO05D007362 5.1e-46 187.6 107 84.1
Gohir.A13G233500 Gossypium hirsutum HOM05D005995 ORTHO05D007362 8.6e-46 186.8 107 85.0
Sabra16G0173300 Salix brachista HOM05D005995 ORTHO05D007362 8.6e-46 186.8 106 85.8
CSS0037016 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 1.1e-45 186.4 107 86.0
CSS0047754 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 1.1e-45 186.4 107 86.0
Oeu031050.1 Olea europaea HOM05D005995 ORTHO05D007362 1.1e-45 186.4 107 86.0
arahy.Tifrunner.gnm1.ann1.SCP5PP Arachis hypogaea HOM05D005995 ORTHO05D007362 1.5e-45 186.0 107 83.2
ECA248G1932 Erigeron canadensis HOM05D005995 ORTHO05D007362 1.9e-45 185.7 107 83.2
TAR131G0002 Trochodendron aralioides HOM05D005995 ORTHO05D007362 1.9e-45 185.7 107 85.0
Sopen06g033540 Solanum pennellii HOM05D005995 ORTHO05D007362 2.5e-45 185.3 106 83.0
PGSC0003DMG400030447 Solanum tuberosum HOM05D005995 ORTHO05D007362 2.5e-45 185.3 106 83.0
Lalb_Chr20g0114841 Lupinus albus HOM05D005995 ORTHO05D007362 3.3e-45 184.9 107 82.2
Glyma.18G060000 Glycine max HOM05D005995 ORTHO05D007362 4.3e-45 184.5 103 85.4
CAN.G1095.10 Capsicum annuum HOM05D005995 ORTHO05D007362 5.6e-45 184.1 106 82.1
Lj6g0019722 Lotus japonicus HOM05D005995 ORTHO05D007362 5.6e-45 184.1 106 82.1
TAR623G0738 Trochodendron aralioides HOM05D005995 ORTHO05D007362 5.6e-45 184.1 107 84.1
Solyc06g082160.4 Solanum lycopersicum HOM05D005995 ORTHO05D007362 7.3e-45 183.7 106 82.1
TPR.G32896 Trifolium pratense HOM05D005995 ORTHO05D007362 9.5e-45 183.3 107 80.4
Lalb_Chr18g0051191 Lupinus albus HOM05D005995 ORTHO05D007362 1.2e-44 183.0 107 83.2
Migut.N00147 Erythranthe guttata HOM05D005995 ORTHO05D007362 1.6e-44 182.6 107 84.1
PSO017G3188 Papaver somniferum HOM05D005995 ORTHO05D007362 1.6e-44 182.6 107 83.2
Psat0s2070g0120 Pisum sativum HOM05D005995 ORTHO05D007362 1.6e-44 182.6 107 81.3
FAN25G2223 Fragaria x ananassa HOM05D005995 ORTHO05D007362 2.1e-44 182.2 103 84.5
PGR031G2980 Punica granatum HOM05D005995 ORTHO05D007362 2.1e-44 182.2 107 81.3
arahy.Tifrunner.gnm1.ann1.6174C5 Arachis hypogaea HOM05D005995 ORTHO05D007362 2.8e-44 181.8 106 81.1
FAN21G0787 Fragaria x ananassa HOM05D005995 ORTHO05D007362 2.8e-44 181.8 103 84.5
Duzib168G2258 Durio zibethinus HOM05D005995 ORTHO05D007362 3.6e-44 181.4 107 81.3
FvH4_3g39150 Fragaria vesca HOM05D005995 ORTHO05D007362 3.6e-44 181.4 103 83.5
FAN11G1452 Fragaria x ananassa HOM05D005995 ORTHO05D007362 3.6e-44 181.4 103 83.5
Ca_14969_v3 Cicer arietinum L. HOM05D005995 ORTHO05D007362 4.7e-44 181.0 107 81.3
MBI03_g03955_MAGBIO Magnolia biondii HOM05D005995 ORTHO05D007362 4.7e-44 181.0 107 84.1
PSO170G4292 Papaver somniferum HOM05D005995 ORTHO05D007362 4.7e-44 181.0 107 82.2
Medtr3g465040 Medicago truncatula HOM05D005995 ORTHO05D007362 6.2e-44 180.6 107 80.4
RcHm_v2.0_Chr5g0070551 Rosa chinensis HOM05D005995 ORTHO05D007362 8.1e-44 180.3 103 82.5
MD03G1063100 Malus domestica HOM05D005995 ORTHO05D007362 1.4e-43 179.5 107 80.4
MD11G1066600 Malus domestica HOM05D005995 ORTHO05D007362 1.8e-43 179.1 106 81.1
Nitab4.5_0013485g0010 Nicotiana tabacum HOM05D005995 ORTHO05D007362 1.8e-43 179.1 106 81.1
vmacro02942 Vaccinium macrocarpon HOM05D005995 ORTHO05D007362 1.8e-43 179.1 107 80.4
TAR633G2447 Trochodendron aralioides HOM05D005995 ORTHO05D007362 2.4e-43 178.7 107 81.3
FAN16G3099 Fragaria x ananassa HOM05D005995 ORTHO05D007362 3.1e-43 178.3 103 82.5
AUR62023851 Chenopodium quinoa HOM05D005995 ORTHO05D007362 5.2e-43 177.6 107 80.4
Nitab4.5_0002043g0030 Nicotiana tabacum HOM05D005995 ORTHO05D007362 5.2e-43 177.6 106 81.1
ATR0681G053 Amborella trichopoda HOM05D005995 ORTHO05D007362 6.8e-43 177.2 107 79.4
Hund06617 Selenicereus undatus HOM05D005995 ORTHO05D007362 6.8e-43 177.2 107 81.3
MSTRG.10034 Avicennia marina HOM05D005995 ORTHO05D007362 1.5e-42 176.0 107 80.4
Sc06g0010410 Simmondsia chinensis HOM05D005995 ORTHO05D007362 1.5e-42 176.0 107 78.5
CDE10G1344 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 2.6e-42 175.3 107 79.4
Sabra09G0056500 Salix brachista HOM05D005995 ORTHO05D007362 3.4e-42 174.9 107 79.4
SGA_v2.0_scaffold371G50155 Striga asiatica HOM05D005995 ORTHO05D007362 4.4e-42 174.5 106 79.2
Thhalv10014805m.g Eutrema salsugineum HOM05D005995 ORTHO05D007362 1.3e-41 172.9 107 77.6
AT5G58575 Arabidopsis thaliana HOM05D005995 ORTHO05D007362 1.7e-41 172.6 107 75.7
EL10Ac3g05994 Beta vulgaris HOM05D005995 ORTHO05D007362 2.9e-41 171.8 107 75.7
Sp6g20270 Schrenkiella parvula HOM05D005995 ORTHO05D007362 3.8e-41 171.4 106 77.4
unitig_62.g23487 Utricularia gibba HOM05D005995 ORTHO05D007362 8.4e-41 170.2 107 80.4
CARHR272410 Cardamine hirsuta HOM05D005995 ORTHO05D007362 1.1e-40 169.9 107 75.7
Carub.0008s1918 Capsella rubella HOM05D005995 ORTHO05D007362 2.4e-40 168.7 107 73.8
AL8G34810 Arabidopsis lyrata HOM05D005995 ORTHO05D007362 3.2e-40 168.3 107 73.8
BcaC01g06637 Brassica carinata HOM05D005995 ORTHO05D007362 4.1e-40 167.9 106 74.5
A03p12120 Brassica napus HOM05D005995 ORTHO05D007362 4.1e-40 167.9 106 74.5
BolC3t13867H Brassica oleracea HOM05D005995 ORTHO05D007362 4.1e-40 167.9 106 74.5
BraA03t10524Z Brassica rapa HOM05D005995 ORTHO05D007362 4.1e-40 167.9 106 74.5
BcaB01g04505 Brassica carinata HOM05D005995 ORTHO05D007362 7.1e-40 167.2 106 74.5
BcaNung06849 Brassica carinata HOM05D002227 ORTHO05D007362 7.1e-40 167.2 106 74.5
Gohir.D13G239100 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.2e-39 166.4 107 76.6
Gorai.013G270000 Gossypium raimondii HOM05D005995 ORTHO05D007362 1.2e-39 166.4 107 76.6
THA.LOC104799390 Tarenaya hassleriana HOM05D005995 ORTHO05D007362 1.6e-39 166.0 106 73.6
Aa31LG11G350 Aethionema arabicum HOM05D005995 ORTHO05D007362 3.5e-39 164.9 107 73.8
MD11G1152800 Malus domestica HOM05D005995 ORTHO05D007362 1.0e-38 163.3 100 77.0
HPP92_012020 Vanilla planifolia HOM05D005995 ORTHO05D007362 2.3e-38 162.2 107 77.6
Sed0015986 Sechium edule HOM05D005995 ORTHO05D007362 6.6e-38 160.6 107 72.0
CDE10G0962 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 2.5e-37 158.7 105 76.2
ClCG03G000500 Citrullus lanatus HOM05D005995 ORTHO05D007362 3.3e-37 158.3 107 72.9
MELO3C020526.2 Cucumis melo HOM05D005995 ORTHO05D007362 3.3e-37 158.3 107 72.9
CsaV3_1G036430 Cucumis sativus L. HOM05D005995 ORTHO05D007362 4.3e-37 157.9 107 72.0
Peaxi162Scf00540g00015 Petunia axillaris HOM05D005995 ORTHO05D007362 4.3e-37 157.9 106 72.6
TWI79G0924 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 2.0e-34 149.1 107 67.3
MD11G1066800 Malus domestica HOM05D005995 ORTHO05D007362 4.4e-34 147.9 100 71.0
SEGI_16655 Sequoiadendron giganteum HOM05D005995 ORTHO05D007362 2.4e-32 142.1 101 66.3
Mapoly0008s0254 Marchantia polymorpha HOM05D005995 ORTHO05D007362 3.2e-32 141.7 108 64.8
TWI31G1135 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 4.2e-32 141.4 107 64.5
C03p14210 Brassica napus HOM05D005995 ORTHO05D007362 1.0e-30 136.7 106 63.2
Pp3c7_14690 Physcomitrium patens HOM05D005995 ORTHO05D007362 1.9e-29 132.5 101 64.4
AagrBONN_evm.TU.Sc2ySwM_344.2127 Anthoceros agrestis HOM05D005995 ORTHO05D007362 6.2e-28 127.5 104 59.6
Zm00001eb286290 Zea mays HOM05D005995 ORTHO05D007362 1.4e-27 126.3 116 58.6
Os05g0351500 Oryza sativa ssp. japonica HOM05D005995 ORTHO05D007362 3.4e-26 121.7 109 57.8
SMO358G0374 Selaginella moellendorffii HOM05D005995 ORTHO05D007362 4.5e-26 121.3 99 61.6
Sed0014404 Sechium edule HOM05D005995 ORTHO05D007362 2.2e-25 119.0 104 59.6
Pp3c11_11530 Physcomitrium patens HOM05D001687 ORTHO05D001608 5.4e-24 114.4 91 60.4
BcaC01g06639 Brassica carinata HOM05D005995 ORTHO05D007362 9.3e-24 113.6 100 58.0
AUR62002337 Chenopodium quinoa HOM05D005995 ORTHO05D007362 6.0e-23 110.9 65 76.9
MD11G1153100 Malus domestica HOM05D005995 ORTHO05D007362 1.3e-22 109.8 75 72.0
Gohir.D05G107900 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.3e-20 103.2 107 53.3
Gorai.009G112000 Gossypium raimondii HOM05D005995 ORTHO05D007362 1.3e-20 103.2 107 53.3
Actinidia32626 Actinidia chinensis HOM05D005995 ORTHO05D007362 1.6e-20 102.8 57 91.2
Gohir.A05G107700 Gossypium hirsutum HOM05D005995 ORTHO05D007362 8.1e-20 100.5 107 52.3
HPP92_013780 Vanilla planifolia HOM05D005995 ORTHO05D007362 2.6e-18 95.5 79 64.6
CBR_g49952 Chara braunii HOM05D000019 ORTHO05D000002 9.9e-18 93.6 137 41.6
Cre17.g719550 Chlamydomonas reinhardtii HOM05D005995 ORTHO05D007362 3.4e-10 68.6 40 67.5
Medtr6g460490 Medicago truncatula HOM05D005995 ORTHO05D007362 3.2e-08 62.0 35 80.0
Pp3c4_14820 Physcomitrium patens HOM05D005995 ORTHO05D311899 3.5e-07 58.5 100 37.0
MCO04G081 Micromonas commoda HOM05D005995 ORTHO05D007362 1.3e-06 56.6 120 35.0
MD11G1071400 Malus domestica HOM05D005995 ORTHO05D007362 1.8e-06 56.2 44 75.0


User provided reference genes

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