Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C868T5 Lonicera japonica HOM05D006362 ORTHO05D008295 7.9e-305 1049.7 541 100.0
Dinv40729 Davidia involucrata HOM05D006362 ORTHO05D008295 2.7e-236 822.0 537 81.4
Hma1.2p1_1344F.1_g277040 Hydrangea macrophylla HOM05D006362 ORTHO05D008295 1.4e-232 809.7 537 80.3
GSVIVG01001989001 Vitis vinifera HOM05D006362 ORTHO05D008295 1.3e-230 803.1 538 78.4
Atru.chr2.3247 Acer truncatum HOM05D006362 ORTHO05D008295 1.2e-228 796.6 538 77.0
Potri.011G135800 Populus trichocarpa HOM05D006362 ORTHO05D008295 5.1e-227 791.2 539 77.9
Thecc.07G046200 Theobroma cacao HOM05D006362 ORTHO05D008295 8.6e-227 790.4 541 76.9
TAR626G1624 Trochodendron aralioides HOM05D006362 ORTHO05D008295 1.2e-225 786.6 536 78.0
TWI38G1299 Tripterygium wilfordii HOM05D006362 ORTHO05D008295 2.8e-225 785.4 539 76.8
Cc05_g13400 Coffea canephora HOM05D006362 ORTHO05D008295 8.1e-225 783.9 538 77.1
Manes.15G074800 Manihot esculenta HOM05D006362 ORTHO05D008295 1.8e-224 782.7 538 76.6
Gorai.002G084800 Gossypium raimondii HOM05D006362 ORTHO05D008295 4.0e-224 781.6 539 75.7
QL08p012554 Quercus lobata HOM05D006362 ORTHO05D008295 6.8e-224 780.8 538 76.4
DCAR_022536 Daucus carota HOM05D006362 ORTHO05D008295 4.4e-223 778.1 554 75.3
Gohir.A01G076501 Gossypium hirsutum HOM05D006362 ORTHO05D008295 5.8e-223 777.7 539 75.1
MD03G1209000 Malus domestica HOM05D006362 ORTHO05D008295 3.8e-222 775.0 539 75.7
CANSAT11G0353 Cannabis sativa HOM05D006362 ORTHO05D008295 4.1e-221 771.5 538 74.2
Ciclev10007871m.g Citrus clementina HOM05D006362 ORTHO05D008295 2.1e-220 769.2 538 75.5
Nitab4.5_0002342g0020 Nicotiana tabacum HOM05D006362 ORTHO05D008295 2.3e-219 765.8 536 75.7
Gohir.D01G064000 Gossypium hirsutum HOM05D006362 ORTHO05D008295 5.1e-219 764.6 539 74.6
Cfa020397 Carpinus fangiana HOM05D006362 ORTHO05D008295 6.6e-219 764.2 606 69.1
HanXRQChr13g0407741 Helianthus annuus HOM05D006362 ORTHO05D008295 3.3e-218 761.9 535 74.8
MELO3C018085.2 Cucumis melo HOM05D006362 ORTHO05D008295 1.2e-217 760.0 539 74.0
CsaV3_1G044730 Cucumis sativus L. HOM05D006362 ORTHO05D008295 3.6e-217 758.4 539 74.0
Duzib268G0905 Durio zibethinus HOM05D006362 ORTHO05D008295 3.6e-217 758.4 541 75.0
Oeu021406.2 Olea europaea HOM05D006362 ORTHO05D008295 1.8e-216 756.1 540 74.1
Prupe.4G206200 Prunus persica HOM05D006362 ORTHO05D008295 2.4e-216 755.7 539 75.3
Eucgr.F03442 Eucalyptus grandis HOM05D006362 ORTHO05D008295 4.0e-216 755.0 539 74.0
RcHm_v2.0_Chr4g0399351 Rosa chinensis HOM05D006362 ORTHO05D008295 5.2e-216 754.6 543 74.4
CAN.G1781.12 Capsicum annuum HOM05D006362 ORTHO05D008295 1.2e-215 753.4 538 74.5
Sed0025840 Sechium edule HOM05D006362 ORTHO05D008295 1.2e-215 753.4 539 72.5
Solyc10g006410.3 Solanum lycopersicum HOM05D006362 ORTHO05D008295 1.2e-215 753.4 535 74.2
FAN12G0341 Fragaria x ananassa HOM05D006362 ORTHO05D008295 2.0e-215 752.7 543 74.6
Sopen10g002360 Solanum pennellii HOM05D006362 ORTHO05D008295 3.4e-215 751.9 535 74.2
FvH4_4g07170 Fragaria vesca HOM05D006362 ORTHO05D008295 4.4e-215 751.5 543 74.4
Sc14g0006480 Simmondsia chinensis HOM05D006362 ORTHO05D008295 9.9e-215 750.4 545 73.2
Glyma.06G271800 Glycine max HOM05D006362 ORTHO05D008295 6.4e-214 747.7 535 72.9
TPR.G25875 Trifolium pratense HOM05D006362 ORTHO05D008295 1.2e-212 743.4 539 71.8
ECA240G1610 Erigeron canadensis HOM05D006362 ORTHO05D008295 2.7e-212 742.3 535 73.6
FAN22G0212 Fragaria x ananassa HOM05D006362 ORTHO05D008295 6.0e-212 741.1 552 73.0
THA.LOC104818092 Tarenaya hassleriana HOM05D006362 ORTHO05D008295 7.8e-212 740.7 543 72.4
Lalb_Chr03g0030071 Lupinus albus HOM05D006362 ORTHO05D008295 1.0e-211 740.3 539 72.2
Lj3g0015245 Lotus japonicus HOM05D006362 ORTHO05D008295 5.1e-211 738.0 537 72.1
Aqoxy1G03661 Aquilegia oxysepala HOM05D006362 ORTHO05D008295 1.1e-210 736.9 535 73.1
Nn1g07069 Nelumbo nucifera HOM05D006362 ORTHO05D008295 1.9e-210 736.1 518 74.9
Psat7g162880 Pisum sativum HOM05D006362 ORTHO05D008295 1.9e-210 736.1 539 71.4
PSO832G4364 Papaver somniferum HOM05D006362 ORTHO05D008295 4.3e-210 734.9 539 72.5
Gorai.009G425700 Gossypium raimondii HOM05D006362 ORTHO05D008295 2.8e-209 732.3 541 71.9
arahy.Tifrunner.gnm1.ann1.Z96I2W Arachis hypogaea HOM05D006362 ORTHO05D008295 4.8e-209 731.5 539 71.1
Medtr4g081050 Medicago truncatula HOM05D006362 ORTHO05D008295 6.2e-209 731.1 539 70.9
Haze_09637 Corylus avellana HOM05D006362 ORTHO05D008295 1.4e-208 729.9 598 68.2
Rhsim06G0213400 Rhododendron simsii HOM05D006362 ORTHO05D008295 1.2e-207 726.9 579 70.1
Thhalv10020417m.g Eutrema salsugineum HOM05D006362 ORTHO05D008295 3.4e-207 725.3 540 71.3
Phvul.011G136800 Phaseolus vulgaris HOM05D006362 ORTHO05D008295 7.6e-207 724.2 539 71.4
Aa31LG8G2360 Aethionema arabicum HOM05D006362 ORTHO05D008295 9.9e-207 723.8 538 70.8
Peaxi162Scf00387g00613 Petunia axillaris HOM05D006362 ORTHO05D008295 9.9e-207 723.8 534 72.7
AL3G27550 Arabidopsis lyrata HOM05D006362 ORTHO05D008295 1.3e-206 723.4 540 71.5
CARHR090140 Cardamine hirsuta HOM05D006362 ORTHO05D008295 1.7e-206 723.0 536 70.9
AT3G15160 Arabidopsis thaliana HOM05D006362 ORTHO05D008295 2.2e-206 722.6 540 71.1
Carub.0003s1481 Capsella rubella HOM05D006362 ORTHO05D008295 3.8e-206 721.8 540 71.1
ClCG05G014560 Citrullus lanatus HOM05D006362 ORTHO05D008295 1.4e-205 719.9 544 71.1
PGR031G2573 Punica granatum HOM05D006362 ORTHO05D008295 1.9e-205 719.5 522 73.6
BraA03t13067Z Brassica rapa HOM05D006362 ORTHO05D008295 3.2e-205 718.8 540 70.4
Sp3g13370 Schrenkiella parvula HOM05D006362 ORTHO05D008295 7.1e-205 717.6 538 70.8
C03p47540 Brassica napus HOM05D006362 ORTHO05D008295 9.3e-205 717.2 540 70.7
BolC3t17030H Brassica oleracea HOM05D006362 ORTHO05D008295 9.3e-205 717.2 540 70.6
ATR0697G203 Amborella trichopoda HOM05D006362 ORTHO05D008295 2.7e-204 715.7 541 70.4
A03p39180 Brassica napus HOM05D006362 ORTHO05D008295 7.9e-204 714.1 540 70.2
Ca_18860_v3 Cicer arietinum L. HOM05D006362 ORTHO05D008295 2.8e-201 705.7 523 70.6
AUR62020525 Chenopodium quinoa HOM05D006362 ORTHO05D008295 1.2e-199 700.3 522 71.3
Ah.06g182950 Amaranthus hybridus HOM05D006362 ORTHO05D008295 2.0e-199 699.5 548 67.5
arahy.Tifrunner.gnm1.ann1.GJJ2CM Arachis hypogaea HOM05D006362 ORTHO05D008295 2.0e-199 699.5 535 69.3
COL.COLO4_09973 Corchorus olitorius HOM05D004186 ORTHO05D006965 1.1e-197 693.7 538 70.8
Gohir.A04G020300 Gossypium hirsutum HOM05D006362 ORTHO05D008295 4.2e-197 691.8 540 69.1
HPP92_009387 Vanilla planifolia HOM05D006362 ORTHO05D008295 1.3e-195 686.8 535 67.9
BcaC01g03890 Brassica carinata HOM05D006362 ORTHO05D008295 1.8e-195 686.4 562 67.1
Lsat_1_v5_gn_5_81640 Lactuca sativa HOM05D006362 ORTHO05D008295 1.3e-193 680.2 521 71.2
Sabra11G0122000 Salix brachista HOM05D006362 ORTHO05D008295 3.1e-192 675.6 524 71.4
SGA_v2.0_scaffold80G25930 Striga asiatica HOM05D006362 ORTHO05D008295 3.1e-192 675.6 540 68.3
Nitab4.5_0002229g0190 Nicotiana tabacum HOM05D006362 ORTHO05D008295 5.8e-191 671.4 559 67.6
EL10Ac4g07932 Beta vulgaris HOM05D006362 ORTHO05D008295 1.7e-190 669.8 533 67.7
AUR62015672 Chenopodium quinoa HOM05D006362 ORTHO05D008295 5.5e-189 664.8 549 66.1
CDE05G0917 Ceratophyllum demersum HOM05D006362 ORTHO05D008295 2.1e-188 662.9 523 68.6
Os04g0626900 Oryza sativa ssp. japonica HOM05D006362 ORTHO05D008295 3.7e-185 652.1 538 64.9
Migut.M01793 Erythranthe guttata HOM05D006362 ORTHO05D008295 1.9e-181 639.8 538 64.7
FAN17G1244 Fragaria x ananassa HOM05D006362 ORTHO05D008295 4.2e-181 638.6 548 66.8
Hund23291 Selenicereus undatus HOM05D006362 ORTHO05D008295 2.2e-174 616.3 512 65.2
CiPaw.11G185900 Carya illinoinensis HOM05D006362 ORTHO05D008295 2.9e-166 589.3 400 77.8
vmacro11753 Vaccinium macrocarpon HOM05D006362 ORTHO05D008295 1.4e-152 543.9 660 50.8
Gohir.D05G366200 Gossypium hirsutum HOM05D006362 ORTHO05D008295 7.0e-152 541.6 400 72.0
Mapoly0021s0009 Marchantia polymorpha HOM05D006362 ORTHO05D008295 1.6e-151 540.4 539 56.0
Pp3c24_12510 Physcomitrium patens HOM05D006362 ORTHO05D008295 2.7e-151 539.7 542 55.7
SMO115G0345 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 7.0e-144 515.0 533 55.0
Pp3c23_6050 Physcomitrium patens HOM05D006362 ORTHO05D008295 2.5e-133 479.9 513 54.8
AagrBONN_evm.TU.Sc2ySwM_117.2426 Anthoceros agrestis HOM05D006362 ORTHO05D008295 4.3e-133 479.2 541 49.5
BolC3t17019H Brassica oleracea HOM05D006362 ORTHO05D008295 2.4e-112 410.2 293 71.7
PGSC0003DMG403014396 Solanum tuberosum HOM05D006362 ORTHO05D008295 1.2e-100 371.3 273 71.8
Zm00001eb070060 Zea mays HOM05D006362 ORTHO05D008295 9.6e-93 345.1 308 59.1
HPP92_009392 Vanilla planifolia HOM05D006362 ORTHO05D008295 5.4e-88 329.3 277 64.3
CSS0013960 Camellia sinensis var. sinensis HOM05D006362 ORTHO05D008295 1.3e-76 291.6 192 80.7
PGSC0003DMG402014396 Solanum tuberosum HOM05D006362 ORTHO05D008295 3.7e-60 236.9 159 76.7
SEGI_18975 Sequoiadendron giganteum HOM05D006362 ORTHO05D008295 1.3e-52 211.8 166 69.3
Rhsim12G0205700 Rhododendron simsii HOM05D006362 ORTHO05D008295 9.1e-43 179.1 268 47.4
CBR_g57499 Chara braunii HOM05D006362 ORTHO05D008295 1.0e-38 165.6 242 40.5
SHI31860 Sapria himalayana HOM05D006362 ORTHO05D008295 7.2e-32 142.9 115 62.6
Gorai.002G084600 Gossypium raimondii HOM05D006362 ORTHO05D008295 2.7e-31 141.0 107 67.3
Hma1.2p1_1609F.1_g293480 Hydrangea macrophylla HOM05D006362 ORTHO05D008295 2.7e-31 141.0 103 72.8
Gohir.D01G063866 Gossypium hirsutum HOM05D006362 ORTHO05D008295 7.5e-29 132.9 107 64.5
Cpa.g.sc131.92 Carica papaya HOM05D006362 ORTHO05D008295 1.7e-28 131.7 84 79.8
VMungo0251G2436 Vigna mungo HOM05D006362 ORTHO05D008295 1.6e-23 115.2 83 69.9
SEGI_13710 Sequoiadendron giganteum HOM05D006362 ORTHO05D008295 3.6e-23 114.0 132 47.7
CBR_g57501 Chara braunii HOM05D006362 ORTHO05D008295 3.1e-19 100.9 111 49.5
HPP92_009393 Vanilla planifolia HOM05D006362 ORTHO05D008295 3.1e-19 100.9 96 57.3
HanXRQChr16g0507081 Helianthus annuus HOM05D006362 ORTHO05D008295 9.2e-19 99.4 78 69.2
Cc02_g13940 Coffea canephora HOM05D006362 ORTHO05D008295 9.8e-13 79.3 68 72.1
SMO347G0562 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 6.4e-12 76.6 179 36.9
BcaB04g20946 Brassica carinata HOM05D006362 ORTHO05D008295 1.6e-10 72.0 45 71.1
SMO228G0126 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 1.6e-10 72.0 192 32.8
SMO167G0061 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 6.0e-10 70.1 131 41.2
Lsat_1_v5_gn_3_32440 Lactuca sativa HOM05D006362 ORTHO05D228842 1.7e-09 68.6 51 72.5


User provided reference genes

Program Settings