Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C750T6 Lonicera japonica HOM05D003463 ORTHO05D004206 1.2e-80 303.1 149 100.0
Lj1C753T3 Lonicera japonica HOM05D003463 ORTHO05D004206 2.4e-78 295.4 144 100.0
Dinv10901 Davidia involucrata HOM05D003463 ORTHO05D004206 9.8e-56 220.3 140 77.9
CSS0023493 Camellia sinensis var. sinensis HOM05D003463 ORTHO05D004206 3.9e-52 208.4 140 75.0
CSS0042378 Camellia sinensis var. sinensis HOM05D003463 ORTHO05D004206 8.6e-52 207.2 139 75.5
Thecc.02G164300 Theobroma cacao HOM05D003463 ORTHO05D004206 1.9e-51 206.1 140 73.6
Prupe.3G222600 Prunus persica HOM05D003463 ORTHO05D004206 4.3e-51 204.9 141 74.5
Duzib052G0139 Durio zibethinus HOM05D003463 ORTHO05D004206 1.2e-50 203.4 141 70.9
Manes.13G074400 Manihot esculenta HOM05D003463 ORTHO05D004206 2.8e-50 202.2 140 75.0
Actinidia12488 Actinidia chinensis HOM05D003463 ORTHO05D004206 3.6e-50 201.8 134 73.9
Dinv18548 Davidia involucrata HOM05D003463 ORTHO05D004206 3.6e-50 201.8 133 76.7
MD09G1103200 Malus domestica HOM05D003463 ORTHO05D004206 6.2e-50 201.1 140 72.9
RcHm_v2.0_Chr2g0160501 Rosa chinensis HOM05D003463 ORTHO05D004206 6.2e-50 201.1 139 74.1
TAR627G1072 Trochodendron aralioides HOM05D003463 ORTHO05D004206 8.0e-50 200.7 140 72.9
Duzib248G0717 Durio zibethinus HOM05D003463 ORTHO05D004206 2.3e-49 199.1 141 71.6
Ciclev10014009m.g Citrus clementina HOM05D003463 ORTHO05D004206 3.1e-49 198.7 141 75.9
MD17G1091000 Malus domestica HOM05D003463 ORTHO05D004206 8.9e-49 197.2 140 71.4
COL.COLO4_13026 Corchorus olitorius HOM05D003463 ORTHO05D004206 1.5e-48 196.4 141 69.5
Rhsim06G0155700 Rhododendron simsii HOM05D003463 ORTHO05D004206 1.5e-48 196.4 139 71.9
Gohir.A03G162950 Gossypium hirsutum HOM05D003463 ORTHO05D004206 4.4e-48 194.9 140 70.0
TAR629G1280 Trochodendron aralioides HOM05D003463 ORTHO05D004206 5.8e-48 194.5 135 71.9
Atru.chr6.3118 Acer truncatum HOM05D003463 ORTHO05D004206 7.5e-48 194.1 141 74.5
Gorai.005G208600 Gossypium raimondii HOM05D003463 ORTHO05D004206 9.8e-48 193.7 140 69.3
Cpa.g.sc8.254 Carica papaya HOM05D003463 ORTHO05D004206 1.7e-47 193.0 141 70.9
HanXRQChr17g0563751 Helianthus annuus HOM05D003463 ORTHO05D004206 1.7e-47 193.0 128 73.4
Lalb_Chr14g0375591 Lupinus albus HOM05D003463 ORTHO05D004206 1.7e-47 193.0 145 69.0
Cfa014461 Carpinus fangiana HOM05D003463 ORTHO05D004206 3.7e-47 191.8 140 69.3
vmacro12241 Vaccinium macrocarpon HOM05D003463 ORTHO05D004206 3.7e-47 191.8 134 70.1
CANSAT64G0087 Cannabis sativa HOM05D003463 ORTHO05D004206 6.4e-47 191.0 139 69.8
DCAR_021199 Daucus carota HOM05D003463 ORTHO05D004206 6.4e-47 191.0 140 69.3
Peaxi162Scf00007g01417 Petunia axillaris HOM05D003463 ORTHO05D004206 6.4e-47 191.0 125 72.0
Psat0s3330g0040 Pisum sativum HOM05D003463 ORTHO05D004206 6.4e-47 191.0 144 66.7
Haze_12964 Corylus avellana HOM05D003463 ORTHO05D004206 8.3e-47 190.7 140 69.3
Lj3g0003812 Lotus japonicus HOM05D003463 ORTHO05D004206 8.3e-47 190.7 142 67.6
FvH4_6g43760 Fragaria vesca HOM05D003463 ORTHO05D004206 1.9e-46 189.5 139 70.5
FAN09G4547 Fragaria x ananassa HOM05D003463 ORTHO05D004206 1.9e-46 189.5 139 70.5
FAN14G1979 Fragaria x ananassa HOM05D003463 ORTHO05D004206 1.9e-46 189.5 139 70.5
Nitab4.5_0001134g0130 Nicotiana tabacum HOM05D003463 ORTHO05D004206 3.2e-46 188.7 125 72.0
QL08p034245 Quercus lobata HOM05D003463 ORTHO05D004206 3.2e-46 188.7 140 70.0
FAN05G2372 Fragaria x ananassa HOM05D003463 ORTHO05D004206 4.1e-46 188.3 139 70.5
Potri.017G041100 Populus trichocarpa HOM05D003463 ORTHO05D004206 4.1e-46 188.3 140 69.3
TPR.G30794 Trifolium pratense HOM05D003463 ORTHO05D004206 4.1e-46 188.3 144 64.6
Nn1g03744 Nelumbo nucifera HOM05D003463 ORTHO05D004206 5.4e-46 188.0 140 68.6
Glyma.06G301900 Glycine max HOM05D003463 ORTHO05D004206 1.2e-45 186.8 140 66.4
Nitab4.5_0003429g0030 Nicotiana tabacum HOM05D003463 ORTHO05D004206 1.6e-45 186.4 125 70.4
CsaV3_7G003880 Cucumis sativus L. HOM05D003463 ORTHO05D004206 2.0e-45 186.0 139 70.5
FAN02G4525 Fragaria x ananassa HOM05D003463 ORTHO05D004206 2.0e-45 186.0 139 69.8
Sabra17G0027900 Salix brachista HOM05D003463 ORTHO05D004206 2.7e-45 185.7 148 64.9
MELO3C018791.2 Cucumis melo HOM05D003463 ORTHO05D004206 3.5e-45 185.3 139 69.8
Nn1g06924 Nelumbo nucifera HOM05D003463 ORTHO05D004206 6.0e-45 184.5 140 67.1
Medtr2g089080 Medicago truncatula HOM05D003463 ORTHO05D004206 7.8e-45 184.1 144 64.6
VMungo1080G1634 Vigna mungo HOM05D003463 ORTHO05D004206 7.8e-45 184.1 141 66.0
Lsat_1_v5_gn_8_129901 Lactuca sativa HOM05D003463 ORTHO05D004206 1.3e-44 183.3 141 67.4
Sed0025509 Sechium edule HOM05D003463 ORTHO05D004206 1.3e-44 183.3 140 69.3
Hund08062 Selenicereus undatus HOM05D003463 ORTHO05D004206 1.3e-44 183.3 141 67.4
Sed0018482 Sechium edule HOM05D003463 ORTHO05D004206 1.7e-44 183.0 138 69.6
CiPaw.04G119100 Carya illinoinensis HOM05D003463 ORTHO05D004206 2.3e-44 182.6 140 67.9
Ca_01564_v3 Cicer arietinum L. HOM05D003463 ORTHO05D004206 2.3e-44 182.6 138 66.7
Phvul.005G112000 Phaseolus vulgaris HOM05D003463 ORTHO05D004206 2.3e-44 182.6 141 65.2
TWI36G1584 Tripterygium wilfordii HOM05D003463 ORTHO05D004206 3.0e-44 182.2 141 68.8
Potri.007G119300 Populus trichocarpa HOM05D003463 ORTHO05D004206 3.9e-44 181.8 140 67.1
TWI18G0507 Tripterygium wilfordii HOM05D003463 ORTHO05D004206 5.0e-44 181.4 140 69.3
Glyma.12G102400 Glycine max HOM05D003463 ORTHO05D004206 6.6e-44 181.0 140 65.0
Eucgr.A01739 Eucalyptus grandis HOM05D003463 ORTHO05D004206 1.5e-43 179.9 141 65.2
Glyma.13G305000 Glycine max HOM05D003463 ORTHO05D004206 1.9e-43 179.5 141 63.8
Ca_20672_v3 Cicer arietinum L. HOM05D003463 ORTHO05D004206 2.5e-43 179.1 141 65.2
Glyma.12G196800 Glycine max HOM05D003463 ORTHO05D004206 3.3e-43 178.7 141 63.1
EL10Ac9g22340 Beta vulgaris HOM05D003463 ORTHO05D004206 7.3e-43 177.6 133 66.2
Lj3g0021154 Lotus japonicus HOM05D003463 ORTHO05D004206 1.6e-42 176.4 140 62.9
Lalb_Chr19g0135651 Lupinus albus HOM05D003463 ORTHO05D004206 1.6e-42 176.4 143 62.2
Solyc07g052940.4 Solanum lycopersicum HOM05D003463 ORTHO05D004206 2.1e-42 176.0 122 68.9
Sopen07g026490 Solanum pennellii HOM05D003463 ORTHO05D004206 2.1e-42 176.0 122 68.9
TPR.G33076 Trifolium pratense HOM05D003463 ORTHO05D004206 2.1e-42 176.0 142 61.3
PGR042G2093 Punica granatum HOM05D003463 ORTHO05D004206 2.8e-42 175.6 141 65.2
SalBow7G2865 Salvia bowleyana HOM05D003463 ORTHO05D004206 2.8e-42 175.6 139 65.5
ECA233G2663 Erigeron canadensis HOM05D003463 ORTHO05D004206 3.6e-42 175.3 120 73.3
Sc21g0001820 Simmondsia chinensis HOM05D003463 ORTHO05D004206 4.7e-42 174.9 136 63.2
Medtr4g045743 Medicago truncatula HOM05D003463 ORTHO05D004206 8.1e-42 174.1 144 60.4
Migut.M00384 Erythranthe guttata HOM05D003463 ORTHO05D004206 1.4e-41 173.3 131 65.6
Aa31LG8G8660 Aethionema arabicum HOM05D003463 ORTHO05D004206 3.1e-41 172.2 146 58.2
PSO675G4322 Papaver somniferum HOM05D003463 ORTHO05D004206 3.1e-41 172.2 127 68.5
CAN.G86.25 Capsicum annuum HOM05D003463 ORTHO05D004206 4.0e-41 171.8 122 67.2
PSO541G5151 Papaver somniferum HOM05D003463 ORTHO05D004206 5.2e-41 171.4 127 68.5
Aqoxy4G01913 Aquilegia oxysepala HOM05D003463 ORTHO05D004206 1.5e-40 169.9 123 67.5
BcaB02g07835 Brassica carinata HOM05D003463 ORTHO05D004206 2.0e-40 169.5 138 62.3
BcaC08g44245 Brassica carinata HOM05D003463 ORTHO05D004206 2.0e-40 169.5 138 62.3
BcaC09g50202 Brassica carinata HOM05D003463 ORTHO05D004206 2.0e-40 169.5 134 63.4
C01p27890 Brassica napus HOM05D003463 ORTHO05D004206 2.0e-40 169.5 134 63.4
C06p16490 Brassica napus HOM05D003463 ORTHO05D004206 2.0e-40 169.5 138 62.3
BolC1t02722H Brassica oleracea HOM05D003463 ORTHO05D004206 2.0e-40 169.5 134 63.4
BolC6t36852H Brassica oleracea HOM05D003463 ORTHO05D004206 2.0e-40 169.5 138 62.3
Thhalv10024183m.g Eutrema salsugineum HOM05D003463 ORTHO05D004206 2.6e-40 169.1 134 63.4
A05p17060 Brassica napus HOM05D003463 ORTHO05D004206 3.4e-40 168.7 138 62.3
BraA05t20607Z Brassica rapa HOM05D003463 ORTHO05D004206 3.4e-40 168.7 138 62.3
THA.LOC104808502 Tarenaya hassleriana HOM05D003463 ORTHO05D004206 4.4e-40 168.3 134 66.4
BcaNung00300 Brassica carinata HOM05D003463 ORTHO05D004206 5.8e-40 167.9 132 65.9
A01p22340 Brassica napus HOM05D003463 ORTHO05D004206 1.3e-39 166.8 134 62.7
BraA01t02149Z Brassica rapa HOM05D003463 ORTHO05D004206 1.3e-39 166.8 134 62.7
Sp7g13400 Schrenkiella parvula HOM05D003463 ORTHO05D004206 1.3e-39 166.8 129 64.3
Psat4g159400 Pisum sativum HOM05D003463 ORTHO05D004846 2.9e-39 165.6 127 65.4
DCAR_009696 Daucus carota HOM05D003463 ORTHO05D004206 4.9e-39 164.9 125 66.4
SHI10284 Sapria himalayana HOM05D003463 ORTHO05D004206 4.9e-39 164.9 124 66.1
Ah.01g005040 Amaranthus hybridus HOM05D003463 ORTHO05D004206 6.4e-39 164.5 129 61.2
Gohir.D02G186400 Gossypium hirsutum HOM05D003463 ORTHO05D004206 6.4e-39 164.5 140 62.1
Psat7g193080 Pisum sativum HOM05D003463 ORTHO05D004206 6.4e-39 164.5 111 71.2
AL7G40500 Arabidopsis lyrata HOM05D003463 ORTHO05D004206 1.4e-38 163.3 133 62.4
CARHR221910 Cardamine hirsuta HOM05D003463 ORTHO05D004206 7.1e-38 161.0 134 57.5
Psat0s2295g0120 Pisum sativum HOM05D004553 ORTHO05D005426 7.1e-38 161.0 126 64.3
TPR.G19054 Trifolium pratense HOM05D003463 ORTHO05D004206 1.6e-37 159.8 107 70.1
unitig_8.g4613 Utricularia gibba HOM05D003463 ORTHO05D004206 4.6e-37 158.3 111 70.3
SGA_v2.0_scaffold34G13880 Striga asiatica HOM05D003463 ORTHO05D004206 6.0e-37 157.9 132 59.1
CDE11G1115 Ceratophyllum demersum HOM05D003463 ORTHO05D004206 7.8e-37 157.5 111 66.7
CDE05G3394 Ceratophyllum demersum HOM05D003463 ORTHO05D004206 3.0e-36 155.6 111 67.6
Zm00001eb413080 Zea mays HOM05D003463 ORTHO05D004206 2.1e-34 149.4 109 65.1
ATR0804G005 Amborella trichopoda HOM05D003463 ORTHO05D004206 4.7e-34 148.3 135 54.8
Zm00001eb171790 Zea mays HOM05D003463 ORTHO05D004206 4.0e-33 145.2 108 64.8
Cc05_g05330 Coffea canephora HOM05D003463 ORTHO05D004206 3.8e-31 138.7 144 54.9
AT4G15180 Arabidopsis thaliana HOM05D003463 ORTHO05D004206 4.7e-26 121.7 147 49.0
Aa31LG9G1440 Aethionema arabicum HOM05D003463 ORTHO05D000047 5.8e-24 114.8 125 51.2
Psat3g081480 Pisum sativum HOM05D003675 ORTHO05D004318 3.9e-20 102.1 86 59.3
SEGI_02831 Sequoiadendron giganteum HOM05D003463 ORTHO05D004206 6.7e-12 74.7 105 38.1
Oeu011067.1 Olea europaea HOM05D003463 ORTHO05D004206 1.1e-06 57.4 91 42.9
Mapoly0021s0105 Marchantia polymorpha HOM05D003463 ORTHO05D004206 4.2e-06 55.5 59 40.7


User provided reference genes

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