Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C252G16 Lonicera japonica HOM05D057894 ORTHO05D023989 5.4e-87 324.3 167 100.0
Lj1A272T47 Lonicera japonica HOM05D057894 ORTHO05D023989 4.5e-41 171.8 108 87.0
Lj1A247T60 Lonicera japonica HOM05D001076 ORTHO05D005313 3.7e-27 125.6 147 55.8
FAN16G3163 Fragaria x ananassa HOM05D001076 ORTHO05D005313 3.1e-18 95.9 117 45.3
SGA_v2.0_scaffold29G12156 Striga asiatica HOM05D001076 ORTHO05D005313 4.1e-18 95.5 117 45.3
FAN25G3724 Fragaria x ananassa HOM05D001076 ORTHO05D005313 9.1e-18 94.4 117 45.3
Lsat_1_v5_gn_2_38521 Lactuca sativa HOM05D001076 ORTHO05D005313 2.6e-17 92.8 139 42.4
COL.COLO4_18350 Corchorus olitorius HOM05D001076 ORTHO05D005313 3.5e-17 92.4 121 43.0
BcaB01g04759 Brassica carinata HOM05D001076 ORTHO05D023989 5.0e-16 88.6 114 43.0
BcaB01g04761 Brassica carinata HOM05D001076 ORTHO05D023989 1.5e-15 87.0 116 40.5
C03p12000 Brassica napus HOM05D004396 ORTHO05D023989 1.5e-15 87.0 116 40.5
Cc01_g06920 Coffea canephora HOM05D001076 ORTHO05D005313 1.7e-11 73.6 128 42.2
GSVIVG01029892001 Vitis vinifera HOM05D001076 ORTHO05D005313 7.0e-10 68.2 128 42.2
MELO3C014708.2 Cucumis melo HOM05D001076 ORTHO05D005313 7.7e-09 64.7 45 68.9
Nitab4.5_0002368g0120 Nicotiana tabacum HOM05D001076 ORTHO05D005313 7.7e-09 64.7 127 39.4
CSS0006132 Camellia sinensis var. sinensis HOM05D001076 ORTHO05D005313 1.1e-07 60.8 39 74.4
Gorai.009G105800 Gossypium raimondii HOM05D001076 ORTHO05D005313 1.5e-07 60.5 132 40.2
Gohir.A05G101900 Gossypium hirsutum HOM05D001076 ORTHO05D005313 1.9e-07 60.1 132 40.2
Gohir.D05G101600 Gossypium hirsutum HOM05D001076 ORTHO05D005313 1.9e-07 60.1 132 40.2
Peaxi162Scf00973g00315 Petunia axillaris HOM05D001076 ORTHO05D005313 3.2e-07 59.3 44 59.1
Sabra09G0010600 Salix brachista HOM05D001076 ORTHO05D005313 3.2e-07 59.3 35 74.3
PGR102G0053 Punica granatum HOM05D001076 ORTHO05D005313 4.2e-07 58.9 51 56.9
Thecc.09G338800 Theobroma cacao HOM05D001076 ORTHO05D005313 4.2e-07 58.9 46 65.2
Sc21g0000250 Simmondsia chinensis HOM05D001076 ORTHO05D005313 5.5e-07 58.5 37 73.0
vmacro04099 Vaccinium macrocarpon HOM05D001076 ORTHO05D005313 5.5e-07 58.5 40 62.5
PSO384G3024 Papaver somniferum HOM05D001076 ORTHO05D005313 2.7e-06 56.2 128 39.1
Actinidia06991 Actinidia chinensis HOM05D001076 ORTHO05D005313 3.6e-06 55.8 33 72.7
DCAR_028376 Daucus carota HOM05D001076 ORTHO05D005313 4.7e-06 55.5 130 38.5
Dinv10719 Davidia involucrata HOM05D001076 ORTHO05D005313 4.7e-06 55.5 37 67.6
Gohir.D03G133700 Gossypium hirsutum HOM05D001076 ORTHO05D005313 8.0e-06 54.7 43 58.1
Gorai.003G140800 Gossypium raimondii HOM05D001076 ORTHO05D005313 8.0e-06 54.7 43 58.1


User provided reference genes

Program Settings