Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C1157G3 Lonicera japonica HOM05D002785 ORTHO05D025765 2.8e-94 348.6 175 100.0
TAR624G1101 Trochodendron aralioides HOM05D002785 ORTHO05D003042 2.4e-21 106.3 132 44.7
TAR624G1304 Trochodendron aralioides HOM05D002785 ORTHO05D003042 5.4e-21 105.1 132 43.9
Cfa000764 Carpinus fangiana HOM05D002785 ORTHO05D003042 1.9e-18 96.7 127 45.7
Haze_05954 Corylus avellana HOM05D002785 ORTHO05D003042 4.3e-18 95.5 131 45.0
Nn3g20311 Nelumbo nucifera HOM05D002785 ORTHO05D003042 3.1e-16 89.4 132 40.2
CSS0011878 Camellia sinensis var. sinensis HOM05D002785 ORTHO05D003042 4.0e-16 89.0 146 42.5
Rhsim13G0125900 Rhododendron simsii HOM05D002785 ORTHO05D003042 3.4e-15 85.9 124 42.7
Ciclev10014133m.g Citrus clementina HOM05D002785 ORTHO05D003042 9.9e-15 84.3 135 39.3
Potri.001G459900 Populus trichocarpa HOM05D002785 ORTHO05D003042 9.9e-15 84.3 134 44.0
MD05G1264100 Malus domestica HOM05D002785 ORTHO05D003042 1.3e-14 84.0 128 39.8
CiPaw.10G110800 Carya illinoinensis HOM05D002785 ORTHO05D003042 1.7e-14 83.6 123 43.1
MD10G1242200 Malus domestica HOM05D002785 ORTHO05D025765 1.9e-13 80.1 129 40.3
QL05p064786 Quercus lobata HOM05D002785 ORTHO05D003042 3.2e-13 79.3 127 43.3
DCAR_007810 Daucus carota HOM05D002785 ORTHO05D003042 7.1e-13 78.2 110 45.5
FAN21G2235 Fragaria x ananassa HOM05D002785 ORTHO05D003042 7.1e-13 78.2 128 37.5
Prupe.4G101500 Prunus persica HOM05D002785 ORTHO05D003042 2.7e-12 76.3 133 39.8
Sabra16G0311700 Salix brachista HOM05D002785 ORTHO05D003042 4.6e-12 75.5 134 41.8
Cpa.g.sc285.7 Carica papaya HOM05D002785 ORTHO05D003042 1.3e-11 73.9 71 54.9
COL.COLO4_19340 Corchorus olitorius HOM05D002785 ORTHO05D003042 2.3e-11 73.2 135 36.3
Sabra18G0056200 Salix brachista HOM05D002785 ORTHO05D025765 8.6e-11 71.2 130 40.8
TWI63G0524 Tripterygium wilfordii HOM05D002785 ORTHO05D003042 1.5e-10 70.5 134 36.6
vmacro03460 Vaccinium macrocarpon HOM05D002785 ORTHO05D003042 1.9e-10 70.1 101 41.6
FAN25G0371 Fragaria x ananassa HOM05D002785 ORTHO05D003042 2.5e-10 69.7 121 37.2
Nitab4.5_0006230g0020 Nicotiana tabacum HOM05D002785 ORTHO05D003042 2.5e-10 69.7 129 38.0
FvH4_3g11350 Fragaria vesca HOM05D002785 ORTHO05D003042 3.3e-10 69.3 128 35.2
FAN16G0575 Fragaria x ananassa HOM05D002785 ORTHO05D003042 3.3e-10 69.3 128 35.2
ClCG01G008850 Citrullus lanatus HOM05D002785 ORTHO05D003042 4.3e-10 68.9 131 33.6
Lj3g0000529 Lotus japonicus HOM05D002785 ORTHO05D003042 4.3e-10 68.9 127 42.5
Sed0027329 Sechium edule HOM05D002785 ORTHO05D003042 5.6e-10 68.6 132 32.6
Hma1.2p1_0159F.1_g070480 Hydrangea macrophylla HOM05D002785 ORTHO05D003042 1.2e-09 67.4 132 40.2
RcHm_v2.0_Chr5g0018311 Rosa chinensis HOM05D002785 ORTHO05D003042 1.2e-09 67.4 104 41.3
Sopen02g018700 Solanum pennellii HOM05D002785 ORTHO05D003042 1.2e-09 67.4 129 37.2
Thecc.10G003200 Theobroma cacao HOM05D002785 ORTHO05D003042 1.2e-09 67.4 110 39.1
Solyc02g069570.3 Solanum lycopersicum HOM05D002785 ORTHO05D003042 1.6e-09 67.0 129 37.2
Cc09_g07030 Coffea canephora HOM05D002785 ORTHO05D003042 2.8e-09 66.2 121 37.2
Nitab4.5_0001219g0070 Nicotiana tabacum HOM05D002785 ORTHO05D003042 2.8e-09 66.2 129 37.2
MSTRG.7571 Avicennia marina HOM05D002785 ORTHO05D003042 6.2e-09 65.1 101 38.6
Gohir.A10G242200 Gossypium hirsutum HOM05D002785 ORTHO05D003042 1.1e-08 64.3 130 35.4
Manes.14G126700 Manihot esculenta HOM05D002785 ORTHO05D003042 4.0e-08 62.4 131 36.6
Gorai.011G295200 Gossypium raimondii HOM05D002785 ORTHO05D003042 8.9e-08 61.2 130 34.6
CsaV3_1G037710 Cucumis sativus L. HOM05D002785 ORTHO05D003042 1.2e-07 60.8 134 29.9
SGA_v2.0_scaffold298G47642 Striga asiatica HOM05D002785 ORTHO05D000003 5.8e-07 58.5 61 47.5
VMungo1127G0626 Vigna mungo HOM05D002785 ORTHO05D003042 1.7e-06 57.0 125 36.8
MELO3C021816.2 Cucumis melo HOM05D002785 ORTHO05D003042 2.9e-06 56.2 79 39.2
CANSAT35G1290 Cannabis sativa HOM05D002785 ORTHO05D003042 4.9e-06 55.5 126 38.1
PGR083G1445 Punica granatum HOM05D002785 ORTHO05D003042 4.9e-06 55.5 108 33.3
QL07p012105 Quercus lobata HOM05D002785 ORTHO05D000077 4.9e-06 55.5 79 43.0
PSO675G2450 Papaver somniferum HOM05D002785 ORTHO05D003042 6.4e-06 55.1 139 31.7
Sed0002443 Sechium edule HOM05D002785 ORTHO05D003042 6.4e-06 55.1 60 46.7


User provided reference genes

Program Settings