Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A361T11 Lonicera japonica HOM05D006389 ORTHO05D007863 4.9e-93 344.4 161 100.0
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 6.0e-67 257.7 161 72.7
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 2.4e-60 235.7 162 70.4
Hma1.2p1_0728F.1_g209340 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 4.6e-59 231.5 162 67.9
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 1.3e-56 223.4 161 64.0
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 4.0e-55 218.4 161 62.7
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 5.8e-54 214.5 161 62.1
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 1.9e-52 209.5 161 60.2
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 5.4e-52 208.0 161 60.9
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 2.3e-50 202.6 161 57.8
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 5.1e-50 201.4 162 61.1
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 5.1e-50 201.4 161 59.0
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 1.1e-49 200.3 162 61.7
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 1.5e-49 199.9 161 57.8
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.5e-49 199.9 161 58.4
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 4.3e-49 198.4 161 59.6
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 4.3e-49 198.4 162 60.5
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 1.6e-48 196.4 161 61.5
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 2.1e-48 196.1 163 57.1
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 2.8e-48 195.7 163 62.6
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 3.7e-48 195.3 161 60.9
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 4.8e-48 194.9 162 57.4
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 1.1e-47 193.7 161 55.9
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 3.1e-47 192.2 162 59.3
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 4.0e-47 191.8 162 56.8
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 5.3e-47 191.4 161 55.9
Nitab4.5_0000175g0150 Nicotiana tabacum HOM05D006389 ORTHO05D007863 6.9e-47 191.0 162 59.3
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 1.2e-46 190.3 161 57.1
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 5.8e-46 188.0 162 56.2
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 5.8e-46 188.0 161 55.9
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 1.3e-45 186.8 143 63.6
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 2.9e-45 185.7 162 54.9
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 3.8e-45 185.3 161 55.9
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 8.4e-45 184.1 162 56.2
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.1e-44 183.7 187 50.8
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 1.2e-43 180.3 163 57.7
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 1.2e-43 180.3 164 54.9
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 1.6e-43 179.9 164 57.9
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 2.1e-43 179.5 162 58.0
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 2.7e-43 179.1 170 53.5
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 3.5e-43 178.7 186 50.0
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 1.0e-42 177.2 173 56.6
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 1.3e-42 176.8 163 52.8
PSO384G2577 Papaver somniferum HOM05D006389 ORTHO05D007863 1.3e-42 176.8 142 55.6
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 7.4e-41 171.0 161 55.9
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 7.4e-41 171.0 161 54.0
Ciclev10016567m.g Citrus clementina HOM05D006389 ORTHO05D007863 9.6e-41 170.6 171 56.1
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 9.6e-41 170.6 129 62.0
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 9.6e-41 170.6 161 50.9
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 6.2e-40 167.9 162 54.3
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 1.8e-39 166.4 161 49.1
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 3.1e-39 165.6 161 54.7
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 2.2e-37 159.5 168 53.6
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 7.1e-36 154.5 163 49.1
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 7.1e-36 154.5 161 50.3
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 7.1e-36 154.5 161 50.3
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 1.2e-35 153.7 161 47.8
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 1.2e-35 153.7 161 50.9
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 1.6e-35 153.3 167 50.9
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 4.6e-35 151.8 189 46.6
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 1.1e-33 147.1 162 45.1
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 1.5e-33 146.7 166 46.4
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 1.5e-33 146.7 168 47.6
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 4.3e-33 145.2 163 46.6
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 5.7e-33 144.8 161 52.2
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 5.7e-33 144.8 166 44.6
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 9.7e-33 144.1 170 46.5
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 1.3e-32 143.7 167 46.1
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 1.6e-32 143.3 161 47.2
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 2.2e-32 142.9 163 49.1
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 3.7e-32 142.1 163 44.2
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 4.1e-31 138.7 173 44.5
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 4.1e-31 138.7 165 50.3
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 2.0e-30 136.3 169 44.4
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 7.6e-30 134.4 161 46.0
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 2.9e-29 132.5 164 45.1
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 3.8e-29 132.1 165 43.6
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 6.5e-29 131.3 211 42.7
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 9.3e-28 127.5 171 42.7
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.6e-27 126.7 161 44.1
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 2.1e-27 126.3 167 46.1
Ca_20580_v3 Cicer arietinum L. HOM05D006389 ORTHO05D007863 2.3e-26 122.9 134 48.5
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 8.8e-26 120.9 156 43.6
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 5.7e-25 118.2 73 78.1
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 9.7e-25 117.5 76 67.1
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 8.2e-24 114.4 145 42.1
vmacro04177 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 1.5e-22 110.2 91 54.9
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 1.3e-21 107.1 205 38.0
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 3.8e-21 105.5 73 67.1
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 2.7e-19 99.4 62 72.6
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 4.7e-19 98.6 156 34.0
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 1.4e-18 97.1 73 61.6
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 5.1e-18 95.1 153 38.6
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.3e-16 90.5 188 33.0
Peaxi162Scf00559g00114 Petunia axillaris HOM05D006389 ORTHO05D007863 2.8e-16 89.4 61 68.9
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 6.3e-16 88.2 163 35.0
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 1.9e-12 76.6 135 32.6
MBI01_g14332_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 2.7e-11 72.8 100 38.0
AagrBONN_evm.TU.Sc2ySwM_228.3166 Anthoceros agrestis HOM05D006389 ORTHO05D007863 2.0e-09 66.6 146 29.5
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 4.4e-09 65.5 55 60.0
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 4.4e-09 65.5 100 29.0


User provided reference genes

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