Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A204T33 Lonicera japonica HOM05D000161 ORTHO05D009031 9.2e-259 896.3 447 100.0
Lj1A36T49 Lonicera japonica HOM05D000161 ORTHO05D009031 1.2e-213 746.5 549 74.0
Dinv33015 Davidia involucrata HOM05D000161 ORTHO05D009031 5.7e-168 594.7 607 55.5
Lj2C1188T5 Lonicera japonica HOM05D000161 ORTHO05D009031 8.3e-167 590.9 599 55.6
GSVIVG01010978001 Vitis vinifera HOM05D000161 ORTHO05D009031 2.3e-164 582.8 595 55.0
ClCG09G006240 Citrullus lanatus HOM05D000161 ORTHO05D009031 8.6e-164 580.9 585 55.4
Actinidia00683 Actinidia chinensis HOM05D000161 ORTHO05D009031 3.7e-159 565.5 606 53.3
Cfa005996 Carpinus fangiana HOM05D000161 ORTHO05D009031 8.3e-159 564.3 603 52.4
Haze_04852 Corylus avellana HOM05D000161 ORTHO05D009031 1.4e-158 563.5 613 52.0
Sed0007225 Sechium edule HOM05D000161 ORTHO05D009031 1.9e-158 563.1 595 53.3
Atru.chr5.1245 Acer truncatum HOM05D000161 ORTHO05D009031 4.1e-158 562.0 595 53.1
Ciclev10018836m.g Citrus clementina HOM05D000161 ORTHO05D009031 2.7e-157 559.3 604 53.0
MD03G1280600 Malus domestica HOM05D000161 ORTHO05D009031 3.5e-157 558.9 601 52.1
Prupe.8G255100 Prunus persica HOM05D000161 ORTHO05D009031 4.6e-157 558.5 600 52.8
AUR62008570 Chenopodium quinoa HOM05D000161 ORTHO05D009031 6.0e-157 558.1 491 58.9
CANSAT25G3411 Cannabis sativa HOM05D000161 ORTHO05D009031 1.3e-156 557.0 601 52.2
TAR362G0905 Trochodendron aralioides HOM05D000161 ORTHO05D009031 1.7e-156 556.6 603 53.1
MELO3C016048.2 Cucumis melo HOM05D000161 ORTHO05D009031 3.0e-156 555.8 595 53.1
QL12p024497 Quercus lobata HOM05D000161 ORTHO05D009031 3.9e-156 555.4 607 51.6
TWI59G0096 Tripterygium wilfordii HOM05D000161 ORTHO05D009031 6.6e-156 554.7 604 52.3
COL.COLO4_08004 Corchorus olitorius HOM05D000161 ORTHO05D009031 1.5e-155 553.5 605 52.1
CiPaw.07G102700 Carya illinoinensis HOM05D000161 ORTHO05D009031 1.9e-155 553.1 603 52.2
Gohir.D11G121700 Gossypium hirsutum HOM05D000161 ORTHO05D009031 2.5e-155 552.7 605 51.1
Gohir.A11G116600 Gossypium hirsutum HOM05D000161 ORTHO05D009031 7.3e-155 551.2 605 51.1
vmacro02493 Vaccinium macrocarpon HOM05D000161 ORTHO05D009031 7.3e-155 551.2 621 51.7
Potri.002G209900 Populus trichocarpa HOM05D000161 ORTHO05D009031 2.1e-154 549.7 601 51.9
Duzib138G1706 Durio zibethinus HOM05D000161 ORTHO05D009031 8.0e-154 547.7 616 50.2
CsaV3_7G028900 Cucumis sativus L. HOM05D000161 ORTHO05D009031 1.1e-153 547.4 595 51.8
Manes.05G066300 Manihot esculenta HOM05D000161 ORTHO05D009031 1.4e-153 547.0 601 51.2
Gorai.007G130400 Gossypium raimondii HOM05D000161 ORTHO05D009031 1.8e-153 546.6 605 50.7
Eucgr.K03449 Eucalyptus grandis HOM05D000161 ORTHO05D009031 2.6e-152 542.7 595 50.1
Cpa.g.sc441.2 Carica papaya HOM05D000161 ORTHO05D009031 7.5e-152 541.2 595 50.6
Sabra02G0150400 Salix brachista HOM05D000161 ORTHO05D009031 7.5e-152 541.2 623 50.2
PGSC0003DMG400011361 Solanum tuberosum HOM05D000161 ORTHO05D009031 7.5e-152 541.2 597 50.6
Thecc.01G293400 Theobroma cacao HOM05D000161 ORTHO05D009031 2.9e-151 539.3 605 51.6
Cc01_g20450 Coffea canephora HOM05D000161 ORTHO05D009031 3.7e-151 538.9 597 50.4
Solyc09g074660.3 Solanum lycopersicum HOM05D000161 ORTHO05D009031 5.4e-150 535.0 597 50.3
Sopen09g029540 Solanum pennellii HOM05D000161 ORTHO05D009031 2.1e-149 533.1 597 49.9
DCAR_018348 Daucus carota HOM05D000161 ORTHO05D009031 3.5e-149 532.3 591 50.3
Oeu057577.1 Olea europaea HOM05D000161 ORTHO05D009031 6.0e-149 531.6 597 50.8
SGA_v2.0_scaffold1G00398 Striga asiatica HOM05D000161 ORTHO05D009031 6.0e-149 531.6 596 49.5
VMungo1383G3032 Vigna mungo HOM05D000161 ORTHO05D009031 1.3e-148 530.4 605 49.9
RcHm_v2.0_Chr6g0293001 Rosa chinensis HOM05D000161 ORTHO05D009031 3.0e-148 529.3 605 50.4
TPR.G9287 Trifolium pratense HOM05D000161 ORTHO05D009031 3.9e-148 528.9 601 50.6
PGR044G2096 Punica granatum HOM05D000161 ORTHO05D009031 6.6e-148 528.1 605 50.1
CAN.G1777.2 Capsicum annuum HOM05D000161 ORTHO05D009031 8.6e-148 527.7 597 49.7
Aqoxy2G03055 Aquilegia oxysepala HOM05D000161 ORTHO05D009031 1.1e-147 527.3 595 50.6
Rhsim13G0015500 Rhododendron simsii HOM05D000161 ORTHO05D009031 1.1e-147 527.3 614 50.3
Ca_09126_v3 Cicer arietinum L. HOM05D000161 ORTHO05D009031 1.9e-147 526.6 605 50.1
FAN24G1124 Fragaria x ananassa HOM05D000161 ORTHO05D009031 1.9e-147 526.6 595 50.3
Medtr7g108310 Medicago truncatula HOM05D000161 ORTHO05D009031 1.9e-147 526.6 605 50.1
MSTRG.18182 Avicennia marina HOM05D000161 ORTHO05D009031 3.3e-147 525.8 596 49.8
Nitab4.5_0005245g0010 Nicotiana tabacum HOM05D000161 ORTHO05D009031 3.3e-147 525.8 596 49.5
Glyma.03G210900 Glycine max HOM05D000161 ORTHO05D009031 7.3e-147 524.6 606 49.7
Phvul.001G204000 Phaseolus vulgaris HOM05D000161 ORTHO05D009031 9.5e-147 524.2 605 49.4
arahy.Tifrunner.gnm1.ann1.Z5FZN7 Arachis hypogaea HOM05D000161 ORTHO05D009031 1.2e-146 523.9 609 49.8
Oeu034814.1 Olea europaea HOM05D000161 ORTHO05D009031 1.2e-146 523.9 616 49.4
FvH4_2g25030 Fragaria vesca HOM05D000161 ORTHO05D009031 2.8e-146 522.7 601 50.1
Glyma.19G208100 Glycine max HOM05D000161 ORTHO05D009031 4.7e-146 521.9 607 49.3
Sc24g0003880 Simmondsia chinensis HOM05D000161 ORTHO05D009031 4.7e-146 521.9 598 49.8
Nitab4.5_0001102g0080 Nicotiana tabacum HOM05D000161 ORTHO05D009031 8.1e-146 521.2 597 49.6
Lalb_Chr18g0047291 Lupinus albus HOM05D000161 ORTHO05D009031 3.1e-145 519.2 606 49.3
Psat3g023920 Pisum sativum HOM05D000161 ORTHO05D009031 3.1e-145 519.2 603 49.3
ECA236G0218 Erigeron canadensis HOM05D000161 ORTHO05D009031 1.5e-144 516.9 601 49.1
FAN27G3195 Fragaria x ananassa HOM05D000161 ORTHO05D009031 4.4e-144 515.4 607 49.4
HanXRQChr11g0350111 Helianthus annuus HOM05D000161 ORTHO05D009031 4.4e-144 515.4 601 49.4
Migut.D00162 Erythranthe guttata HOM05D000161 ORTHO05D009031 9.9e-144 514.2 596 49.3
arahy.Tifrunner.gnm1.ann1.4BF7AZ Arachis hypogaea HOM05D000161 ORTHO05D009031 2.2e-143 513.1 609 48.8
Lj1g0007269 Lotus japonicus HOM05D000161 ORTHO05D009031 2.9e-143 512.7 606 48.5
PSO170G2241 Papaver somniferum HOM05D000161 ORTHO05D009031 2.9e-143 512.7 597 49.4
Peaxi162Scf00067g01926 Petunia axillaris HOM05D000161 ORTHO05D009031 1.1e-142 510.8 597 49.1
Lsat_1_v5_gn_8_54360 Lactuca sativa HOM05D000161 ORTHO05D009031 1.0e-140 504.2 618 48.2
EL10Ac7g17434 Beta vulgaris HOM05D000161 ORTHO05D009031 1.3e-140 503.8 609 47.0
PSO210G6500 Papaver somniferum HOM05D000161 ORTHO05D009031 6.6e-140 501.5 627 47.2
AT4G03200 Arabidopsis thaliana HOM05D000161 ORTHO05D009031 1.5e-139 500.4 595 48.1
AUR62034669 Chenopodium quinoa HOM05D000161 ORTHO05D009031 4.3e-139 498.8 627 45.8
A09p02490 Brassica napus HOM05D000161 ORTHO05D009031 2.8e-138 496.1 595 47.7
Thhalv10028434m.g Eutrema salsugineum HOM05D000161 ORTHO05D009031 2.8e-138 496.1 595 48.1
Nn3g21368 Nelumbo nucifera HOM05D000161 ORTHO05D009031 4.7e-138 495.4 595 48.1
MBI19_g24003_MAGBIO Magnolia biondii HOM05D000161 ORTHO05D009031 1.1e-137 494.2 580 50.0
BcaB01g01973 Brassica carinata HOM05D000161 ORTHO05D009031 2.4e-137 493.0 595 47.4
Carub.0006s3386 Capsella rubella HOM05D000161 ORTHO05D009031 2.4e-137 493.0 595 47.4
C09p02590 Brassica napus HOM05D000161 ORTHO05D009031 2.0e-136 490.0 595 47.4
AL6G49740 Arabidopsis lyrata HOM05D000161 ORTHO05D009031 2.6e-136 489.6 595 47.4
BraA09t35896Z Brassica rapa HOM05D000161 ORTHO05D009031 2.6e-136 489.6 595 46.9
BcaC04g23994 Brassica carinata HOM05D000161 ORTHO05D009031 4.4e-136 488.8 596 47.5
BolC9t53189H Brassica oleracea HOM05D000161 ORTHO05D009031 4.4e-136 488.8 595 47.1
unitig_747.g21791 Utricularia gibba HOM05D000161 ORTHO05D009031 5.8e-136 488.4 598 46.2
CARHR251630 Cardamine hirsuta HOM05D000161 ORTHO05D009031 7.6e-136 488.0 595 46.9
CSS0042056 Camellia sinensis var. sinensis HOM05D000161 ORTHO05D009031 1.7e-135 486.9 529 52.7
Sp6g03230 Schrenkiella parvula HOM05D000161 ORTHO05D009031 3.8e-135 485.7 595 47.1
Ah.08g212400 Amaranthus hybridus HOM05D000161 ORTHO05D009031 1.0e-132 477.6 630 44.8
SalBow3G3810 Salvia bowleyana HOM05D000161 ORTHO05D009031 1.1e-131 474.2 596 45.8
ATR0706G016 Amborella trichopoda HOM05D000161 ORTHO05D009031 6.9e-129 464.9 602 44.9
Zm00001eb141990 Zea mays HOM05D000161 ORTHO05D009031 1.7e-124 450.3 597 44.2
Aa31LG5G2700 Aethionema arabicum HOM05D000161 ORTHO05D009031 2.4e-121 439.9 574 45.5
HPP92_011821 Vanilla planifolia HOM05D000161 ORTHO05D009031 3.9e-116 422.5 607 42.2
Mapoly0086s0039 Marchantia polymorpha HOM05D000161 ORTHO05D009031 1.1e-102 377.9 616 37.0
CDE09G1084 Ceratophyllum demersum HOM05D000161 ORTHO05D009031 8.2e-98 361.7 529 42.2
AagrBONN_evm.TU.Sc2ySwM_362.238 Anthoceros agrestis HOM05D000161 ORTHO05D009031 6.1e-93 345.5 605 35.2
Pp3c3_16890 Physcomitrium patens HOM05D000161 ORTHO05D009031 1.8e-92 344.0 599 35.7
CBR_g39419 Chara braunii HOM05D000019 ORTHO05D000048 2.0e-83 313.9 607 33.8
Cre07.g331250 Chlamydomonas reinhardtii HOM05D000161 ORTHO05D009031 2.5e-38 164.1 740 22.8
Os01g0935600 Oryza sativa ssp. japonica HOM05D000161 ORTHO05D009031 2.5e-38 164.1 188 48.4
SMO011G0044 Selaginella moellendorffii HOM05D000161 ORTHO05D009031 2.1e-37 161.0 208 41.3
SEGI_26615 Sequoiadendron giganteum HOM05D000161 ORTHO05D009031 3.6e-37 160.2 116 66.4
arahy.Tifrunner.gnm1.ann1.NYYR6I Arachis hypogaea HOM05D000161 ORTHO05D038839 1.8e-36 157.9 129 61.2
arahy.Tifrunner.gnm1.ann1.59Y12W Arachis hypogaea HOM05D000161 ORTHO05D007114 3.1e-28 130.6 116 56.9
arahy.Tifrunner.gnm1.ann1.FVA5UA Arachis hypogaea HOM05D000161 ORTHO05D009031 1.7e-26 124.8 116 56.0
EL10Ac6g14352 Beta vulgaris HOM05D000161 ORTHO05D009031 4.1e-25 120.2 148 44.6
SEGI_06948 Sequoiadendron giganteum HOM05D000161 ORTHO05D038839 5.4e-25 119.8 113 52.2
SEGI_38220 Sequoiadendron giganteum HOM05D000161 ORTHO05D009031 3.5e-24 117.1 103 55.3
arahy.Tifrunner.gnm1.ann1.S4ZP24 Arachis hypogaea HOM05D000161 ORTHO05D009031 2.1e-21 107.8 124 49.2
EL10Ac7g17602 Beta vulgaris HOM05D000161 ORTHO05D039009 2.3e-15 87.8 59 69.5
EL10Ac9g20878 Beta vulgaris HOM05D008595 ORTHO05D010945 2.5e-14 84.3 98 45.9
SEGI_02592 Sequoiadendron giganteum HOM05D000161 ORTHO05D039009 6.4e-10 69.7 53 62.3
Lsat_1_v5_gn_2_56220 Lactuca sativa HOM05D000161 ORTHO05D229717 4.3e-06 57.0 52 53.8
arahy.Tifrunner.gnm1.ann1.0H5KQ4 Arachis hypogaea HOM05D000161 ORTHO05D009031 7.3e-06 56.2 31 74.2


User provided reference genes

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