Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A1232G87 Lonicera japonica HOM05D004784 ORTHO05D005762 3.9e-240 834.3 408 100.0
Hma1.2p1_0298F.1_g117720 Hydrangea macrophylla HOM05D004784 ORTHO05D005762 2.2e-222 775.4 407 91.9
SalBow8G0639 Salvia bowleyana HOM05D004784 ORTHO05D005762 6.3e-222 773.9 406 90.9
Dinv20065 Davidia involucrata HOM05D004784 ORTHO05D005762 8.2e-222 773.5 406 91.9
Dinv13913 Davidia involucrata HOM05D004784 ORTHO05D005762 1.4e-221 772.7 406 91.6
Hma1.2p1_0091F.1_g046500 Hydrangea macrophylla HOM05D004784 ORTHO05D005762 1.4e-221 772.7 407 90.2
Cc09_g01490 Coffea canephora HOM05D004784 ORTHO05D005762 2.4e-221 771.9 404 92.3
RcHm_v2.0_Chr5g0002651 Rosa chinensis HOM05D004784 ORTHO05D005762 4.1e-221 771.2 407 91.2
TAR629G2745 Trochodendron aralioides HOM05D004784 ORTHO05D005762 9.1e-221 770.0 406 90.1
FvH4_3g01820 Fragaria vesca HOM05D004784 ORTHO05D005762 2.6e-220 768.5 407 90.9
FAN25G0478 Fragaria x ananassa HOM05D004784 ORTHO05D005762 4.5e-220 767.7 407 90.9
TWI38G1114 Tripterygium wilfordii HOM05D004784 ORTHO05D005762 4.5e-220 767.7 407 90.7
MELO3C002444.2 Cucumis melo HOM05D004784 ORTHO05D005762 5.9e-220 767.3 404 91.1
CsaV3_1G010620 Cucumis sativus L. HOM05D004784 ORTHO05D005762 7.7e-220 766.9 404 90.8
Sed0006727 Sechium edule HOM05D004784 ORTHO05D005762 7.7e-220 766.9 404 90.3
FAN21G1227 Fragaria x ananassa HOM05D004784 ORTHO05D005762 1.3e-219 766.1 407 90.7
Prupe.4G018500 Prunus persica HOM05D004784 ORTHO05D005762 1.7e-219 765.8 407 90.2
Rhsim13G0152700 Rhododendron simsii HOM05D004784 ORTHO05D005762 3.8e-219 764.6 407 90.9
CiPaw.10G073000 Carya illinoinensis HOM05D004784 ORTHO05D005762 5.0e-219 764.2 407 89.9
TWI63G0560 Tripterygium wilfordii HOM05D004784 ORTHO05D005762 5.0e-219 764.2 407 89.9
Oeu013835.1 Olea europaea HOM05D004784 ORTHO05D005762 1.1e-218 763.1 407 89.2
MSTRG.7197 Avicennia marina HOM05D004784 ORTHO05D005762 1.5e-218 762.7 407 89.7
Medtr4g132360 Medicago truncatula HOM05D004784 ORTHO05D005762 1.9e-218 762.3 404 90.1
PGSC0003DMG400016444 Solanum tuberosum HOM05D004784 ORTHO05D005762 1.9e-218 762.3 405 90.1
Haze_06821 Corylus avellana HOM05D004784 ORTHO05D005762 2.5e-218 761.9 407 89.2
Nitab4.5_0007963g0010 Nicotiana tabacum HOM05D004784 ORTHO05D005762 2.5e-218 761.9 405 90.4
Solyc02g080810.3 Solanum lycopersicum HOM05D004784 ORTHO05D005762 2.5e-218 761.9 405 89.9
Oeu002744.1 Olea europaea HOM05D004784 ORTHO05D005762 3.2e-218 761.5 407 89.2
DCAR_008168 Daucus carota HOM05D004784 ORTHO05D005762 5.5e-218 760.8 419 88.3
Manes.17G025900 Manihot esculenta HOM05D004784 ORTHO05D005762 5.5e-218 760.8 404 90.3
QL02p099920 Quercus lobata HOM05D004784 ORTHO05D005762 5.5e-218 760.8 407 89.2
Sopen02g025500 Solanum pennellii HOM05D004784 ORTHO05D005762 5.5e-218 760.8 405 89.9
Cfa000202 Carpinus fangiana HOM05D004784 ORTHO05D005762 9.4e-218 760.0 407 88.9
Nitab4.5_0002695g0040 Nicotiana tabacum HOM05D004784 ORTHO05D005762 9.4e-218 760.0 405 90.1
Peaxi162Scf00131g01117 Petunia axillaris HOM05D004784 ORTHO05D005762 9.4e-218 760.0 404 89.9
QL05p072692 Quercus lobata HOM05D004784 ORTHO05D005762 9.4e-218 760.0 404 89.6
CiPaw.09G093700 Carya illinoinensis HOM05D004784 ORTHO05D005762 1.2e-217 759.6 407 88.9
MD10G1323700 Malus domestica HOM05D004784 ORTHO05D005762 1.6e-217 759.2 407 89.4
Migut.M01336 Erythranthe guttata HOM05D004784 ORTHO05D005762 2.1e-217 758.8 408 89.2
Thecc.06G223500 Theobroma cacao HOM05D004784 ORTHO05D005762 2.7e-217 758.4 404 90.1
TPR.G37066 Trifolium pratense HOM05D004784 ORTHO05D005762 3.6e-217 758.1 404 89.1
Sed0013135 Sechium edule HOM05D004784 ORTHO05D005762 6.1e-217 757.3 404 88.9
vmacro03682 Vaccinium macrocarpon HOM05D004784 ORTHO05D005762 1.0e-216 756.5 422 87.7
Duzib192G0808 Durio zibethinus HOM05D004784 ORTHO05D005762 1.4e-216 756.1 404 89.9
ClCG03G004610 Citrullus lanatus HOM05D004784 ORTHO05D005762 1.8e-216 755.7 404 89.4
CAN.G1014.12 Capsicum annuum HOM05D004784 ORTHO05D005762 4.0e-216 754.6 405 89.9
Hund21422 Selenicereus undatus HOM05D004784 ORTHO05D005762 4.0e-216 754.6 407 87.7
Aqoxy1G03119 Aquilegia oxysepala HOM05D004784 ORTHO05D005762 6.7e-216 753.8 407 87.5
COL.COLO4_31797 Corchorus olitorius HOM05D004784 ORTHO05D005762 8.8e-216 753.4 404 88.9
Eucgr.L02773 Eucalyptus grandis HOM05D004784 ORTHO05D005762 8.8e-216 753.4 407 88.5
Gohir.A06G149200 Gossypium hirsutum HOM05D004784 ORTHO05D005762 8.8e-216 753.4 404 89.4
Ca_21072_v3 Cicer arietinum L. HOM05D004784 ORTHO05D005762 1.5e-215 752.7 404 89.1
Glyma.17G012000 Glycine max HOM05D004784 ORTHO05D005762 1.5e-215 752.7 404 89.1
Gohir.A05G171500 Gossypium hirsutum HOM05D004784 ORTHO05D005762 1.5e-215 752.7 404 89.4
Gohir.D05G174600 Gossypium hirsutum HOM05D004784 ORTHO05D005762 2.0e-215 752.3 404 89.6
Gorai.010G181500 Gossypium raimondii HOM05D004784 ORTHO05D005762 2.6e-215 751.9 404 89.1
VMungo1215G1817 Vigna mungo HOM05D004784 ORTHO05D005762 2.6e-215 751.9 404 88.9
Lalb_Chr18g0056491 Lupinus albus HOM05D004784 ORTHO05D005762 5.7e-215 750.7 405 88.9
MBI02_g15378_MAGBIO Magnolia biondii HOM05D004784 ORTHO05D005762 7.5e-215 750.4 408 88.2
Ah.09g234740 Amaranthus hybridus HOM05D004784 ORTHO05D005762 9.7e-215 750.0 407 88.7
Gohir.D06G155300 Gossypium hirsutum HOM05D004784 ORTHO05D005762 9.7e-215 750.0 404 88.9
Phvul.003G080400 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 9.7e-215 750.0 404 88.4
Glyma.07G262100 Glycine max HOM05D004784 ORTHO05D005762 1.7e-214 749.2 404 88.1
CANSAT56G2555 Cannabis sativa HOM05D004784 ORTHO05D005762 2.2e-214 748.8 404 89.4
PSO541G3045 Papaver somniferum HOM05D004784 ORTHO05D005762 4.8e-214 747.7 408 86.8
MSTRG.14637 Avicennia marina HOM05D004784 ORTHO05D005762 6.3e-214 747.3 407 88.2
PSO675G1799 Papaver somniferum HOM05D004784 ORTHO05D005762 6.3e-214 747.3 408 86.8
Lalb_Chr15g0087671 Lupinus albus HOM05D004784 ORTHO05D005762 1.4e-213 746.1 405 88.9
C08p47920 Brassica napus HOM05D004784 ORTHO05D005762 1.8e-213 745.7 407 87.2
A09p64310 Brassica napus HOM05D004784 ORTHO05D005762 2.4e-213 745.3 407 87.0
BraA09t41774Z Brassica rapa HOM05D004784 ORTHO05D005762 2.4e-213 745.3 407 87.0
Lj6g0010262 Lotus japonicus HOM05D004784 ORTHO05D005762 2.4e-213 745.3 404 88.1
Psat4g005920 Pisum sativum HOM05D004784 ORTHO05D005762 2.4e-213 745.3 405 88.1
AT1G11860 Arabidopsis thaliana HOM05D004784 ORTHO05D005762 4.1e-213 744.6 407 87.0
THA.LOC104809494 Tarenaya hassleriana HOM05D004784 ORTHO05D005762 4.1e-213 744.6 407 87.0
Hund23455 Selenicereus undatus HOM05D004784 ORTHO05D005762 5.3e-213 744.2 407 87.5
Ah.14g087950 Amaranthus hybridus HOM05D004784 ORTHO05D005762 7.0e-213 743.8 407 87.5
RhsimUnG0232700 Rhododendron simsii HOM05D004784 ORTHO05D005762 7.0e-213 743.8 450 82.2
Carub.0001s1151 Capsella rubella HOM05D004784 ORTHO05D005762 1.2e-212 743.0 407 86.7
Thhalv10007781m.g Eutrema salsugineum HOM05D004784 ORTHO05D005762 1.6e-212 742.7 407 87.0
Glyma.09G004700 Glycine max HOM05D004784 ORTHO05D005762 1.6e-212 742.7 404 88.1
SGA_v2.0_scaffold7G03812 Striga asiatica HOM05D004784 ORTHO05D005762 1.6e-212 742.7 434 84.1
AL1G23030 Arabidopsis lyrata HOM05D004784 ORTHO05D005762 2.0e-212 742.3 407 86.5
unitig_92.g28113 Utricularia gibba HOM05D004784 ORTHO05D005762 2.0e-212 742.3 404 87.6
Potri.004G009600 Populus trichocarpa HOM05D004784 ORTHO05D005762 2.7e-212 741.9 407 86.7
Nn1g03473 Nelumbo nucifera HOM05D004784 ORTHO05D005762 3.5e-212 741.5 446 81.6
Aa31LG1G2870 Aethionema arabicum HOM05D004784 ORTHO05D005762 5.9e-212 740.7 407 86.7
BolC8t52329H Brassica oleracea HOM05D004784 ORTHO05D005762 5.9e-212 740.7 407 86.5
Sp1g10470 Schrenkiella parvula HOM05D004784 ORTHO05D005762 5.9e-212 740.7 407 86.5
arahy.Tifrunner.gnm1.ann1.EH8QHL Arachis hypogaea HOM05D004784 ORTHO05D005762 1.0e-211 740.0 404 86.9
Potri.011G006800 Populus trichocarpa HOM05D004784 ORTHO05D005762 1.0e-211 740.0 407 86.2
PGR142G1596 Punica granatum HOM05D004784 ORTHO05D005762 1.0e-211 740.0 409 87.5
Ciclev10015433m.g Citrus clementina HOM05D004784 ORTHO05D005762 1.3e-211 739.6 408 87.0
Sabra11G0005900 Salix brachista HOM05D004784 ORTHO05D005762 1.3e-211 739.6 407 86.5
Atru.chr10.2254 Acer truncatum HOM05D004784 ORTHO05D005762 6.5e-211 737.3 407 86.0
CARHR012170 Cardamine hirsuta HOM05D004784 ORTHO05D005762 6.5e-211 737.3 407 86.0
vmacro22539 Vaccinium macrocarpon HOM05D004784 ORTHO05D005762 6.5e-211 737.3 473 78.4
BraA08t35239Z Brassica rapa HOM05D004784 ORTHO05D005762 2.5e-210 735.3 408 86.8
C08p14960 Brassica napus HOM05D004784 ORTHO05D005762 5.5e-210 734.2 408 86.3
BolC8t49127H Brassica oleracea HOM05D004784 ORTHO05D005762 5.5e-210 734.2 408 86.3
AUR62022970 Chenopodium quinoa HOM05D004784 ORTHO05D005762 9.4e-210 733.4 404 86.1
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 9.4e-210 733.4 403 86.8
AUR62012328 Chenopodium quinoa HOM05D004784 ORTHO05D005762 1.2e-209 733.0 404 85.6
Glyma.15G109300 Glycine max HOM05D004784 ORTHO05D005762 1.2e-209 733.0 403 87.1
Sc24g0000220 Simmondsia chinensis HOM05D004784 ORTHO05D005762 1.2e-207 726.5 404 85.6
Lsat_1_v5_gn_7_16480 Lactuca sativa HOM05D004784 ORTHO05D005762 2.0e-207 725.7 401 87.5
EL10Ac6g15683 Beta vulgaris HOM05D004784 ORTHO05D005762 1.3e-206 723.0 450 78.7
CDE05G1701 Ceratophyllum demersum HOM05D004784 ORTHO05D005762 2.8e-206 721.8 404 84.7
CDE02G4424 Ceratophyllum demersum HOM05D004784 ORTHO05D005762 4.8e-206 721.1 404 84.9
arahy.Tifrunner.gnm1.ann1.PLZ2LX Arachis hypogaea HOM05D004784 ORTHO05D005762 8.3e-206 720.3 396 86.6
Oeu040336.3 Olea europaea HOM05D004784 ORTHO05D005762 3.1e-205 718.4 518 71.4
Sc05g0009310 Simmondsia chinensis HOM05D004784 ORTHO05D005762 9.1e-205 716.8 404 84.2
Nn030s41595 Nelumbo nucifera HOM05D004784 ORTHO05D005762 5.9e-204 714.1 377 90.7
Gorai.009G179900 Gossypium raimondii HOM05D004784 ORTHO05D005762 3.3e-202 708.4 383 89.3
Sabra04G0005000 Salix brachista HOM05D004784 ORTHO05D005762 4.7e-201 704.5 385 87.5
A08p33210 Brassica napus HOM05D004784 ORTHO05D005762 8.3e-198 693.7 408 83.1
ATR0794G107 Amborella trichopoda HOM05D004784 ORTHO05D005762 1.8e-197 692.6 413 82.1
HPP92_004130 Vanilla planifolia HOM05D004784 ORTHO05D005762 5.0e-195 684.5 411 79.8
HanXRQChr15g0470421 Helianthus annuus HOM05D004784 ORTHO05D005762 5.6e-194 681.0 357 90.8
GSVIVG01012702001 Vitis vinifera HOM05D004784 ORTHO05D005762 3.0e-192 675.2 356 90.4
ECA236G1893 Erigeron canadensis HOM05D004784 ORTHO05D005762 1.3e-190 669.8 404 81.2
Os04g0623800 Oryza sativa ssp. japonica HOM05D004784 ORTHO05D005762 1.9e-189 666.0 399 79.7
SEGI_27497 Sequoiadendron giganteum HOM05D004784 ORTHO05D005762 1.9e-189 666.0 407 77.6
Zm00001eb070250 Zea mays HOM05D004784 ORTHO05D005762 5.0e-187 657.9 377 82.2
BcaB03g13227 Brassica carinata HOM05D004784 ORTHO05D005762 7.3e-186 654.1 356 87.4
Pp3c12_9500 Physcomitrium patens HOM05D004784 ORTHO05D005762 8.9e-176 620.5 404 73.5
Pp3c4_15010 Physcomitrium patens HOM05D004784 ORTHO05D005762 8.9e-176 620.5 405 72.8
TAR627G1106 Trochodendron aralioides HOM05D004784 ORTHO05D005762 4.9e-174 614.8 320 90.9
AagrBONN_evm.TU.Sc2ySwM_344.1952 Anthoceros agrestis HOM05D004784 ORTHO05D005762 9.2e-173 610.5 406 73.9
Mapoly0129s0024 Marchantia polymorpha HOM05D004784 ORTHO05D005762 2.1e-169 599.4 382 73.0
SMO352G0047 Selaginella moellendorffii HOM05D004784 ORTHO05D005762 1.2e-161 573.5 400 68.0
A06p08340 Brassica napus HOM05D004784 ORTHO05D005762 1.7e-158 563.1 407 70.5
CSS0014504 Camellia sinensis var. sinensis HOM05D004784 ORTHO05D005762 3.8e-158 562.0 387 72.9
TAR626G0807 Trochodendron aralioides HOM05D004784 ORTHO05D005762 1.2e-148 530.4 318 80.5
Actinidia26902 Actinidia chinensis HOM05D004784 ORTHO05D005762 3.0e-147 525.8 310 84.5
Cre03.g193750 Chlamydomonas reinhardtii HOM05D004784 ORTHO05D005762 2.2e-142 509.6 400 61.8
Eucgr.E03909 Eucalyptus grandis HOM05D004784 ORTHO05D005762 2.4e-128 463.0 245 91.0
Atru.chr8.533 Acer truncatum HOM05D004784 ORTHO05D005762 1.3e-126 457.2 258 84.5
PRCOL_00007041 Prasinoderma coloniale HOM05D004784 ORTHO05D005762 1.1e-125 454.1 369 62.1
MCO15G045 Micromonas commoda HOM05D004784 ORTHO05D005762 3.4e-119 432.6 383 56.4
MD05G1348800 Malus domestica HOM05D004784 ORTHO05D005762 4.5e-119 432.2 238 86.6
Lalb_Chr20g0118761 Lupinus albus HOM05D004784 ORTHO05D005762 6.7e-115 418.3 225 88.4
BraA06t24032Z Brassica rapa HOM05D000911 ORTHO05D001266 1.9e-109 400.2 239 80.8
Cpa.g.sc152.29 Carica papaya HOM05D004784 ORTHO05D005762 2.6e-98 363.2 195 87.7
Cfa026602 Carpinus fangiana HOM05D004784 ORTHO05D005762 8.9e-83 311.6 419 43.2
Haze_26660 Corylus avellana HOM05D004784 ORTHO05D005762 1.2e-74 284.6 390 43.8
CBR_g24348 Chara braunii HOM05D004784 ORTHO05D005762 3.9e-70 269.6 180 75.6
Sopen07g011340 Solanum pennellii HOM05D004784 ORTHO05D005762 5.8e-66 255.8 181 68.5
EL10Ac1g01135 Beta vulgaris HOM05D004784 ORTHO05D005762 6.2e-60 235.7 141 80.1
EL10Ac2g03767 Beta vulgaris HOM05D004784 ORTHO05D005762 1.1e-59 235.0 140 80.7
Atru.chr8.531 Acer truncatum HOM05D004784 ORTHO05D005762 1.0e-54 218.4 124 80.6
Actinidia05506 Actinidia chinensis HOM05D004784 ORTHO05D005762 2.2e-49 200.7 104 92.3
Actinidia15969 Actinidia chinensis HOM05D004784 ORTHO05D058202 5.7e-21 106.3 128 47.7
Actinidia11861 Actinidia chinensis HOM05D004784 ORTHO05D005762 6.9e-19 99.4 58 75.9
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 1.8e-11 74.7 321 24.3
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 4.1e-11 73.6 337 25.8
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 3.2e-08 63.9 334 22.8


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