Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A1166G73 Lonicera japonica HOM05D005319 ORTHO05D006632 8.5e-117 423.7 218 100.0
Lj5A285G49 Lonicera japonica HOM05D005319 ORTHO05D006632 1.8e-45 186.8 433 37.4
Hma1.2p1_0052F.1_g030050 Hydrangea macrophylla HOM05D005319 ORTHO05D006632 3.9e-29 132.5 363 33.9
Nitab4.5_0005164g0040 Nicotiana tabacum HOM05D005319 ORTHO05D006632 2.4e-26 123.2 370 32.2
Nitab4.5_0003247g0020 Nicotiana tabacum HOM05D005319 ORTHO05D006632 1.7e-24 117.1 382 31.4
Actinidia26200 Actinidia chinensis HOM05D005319 ORTHO05D006632 2.9e-24 116.3 379 32.7
Peaxi162Scf00011g02012 Petunia axillaris HOM05D005319 ORTHO05D006632 3.8e-24 115.9 380 31.1
CAN.G855.58 Capsicum annuum HOM05D005319 ORTHO05D006632 2.5e-23 113.2 376 30.6
PGSC0003DMG400020717 Solanum tuberosum HOM05D005319 ORTHO05D006632 4.2e-23 112.5 376 31.4
Rhsim05G0118000 Rhododendron simsii HOM05D005319 ORTHO05D006632 5.5e-23 112.1 370 30.8
Solyc01g102970.3 Solanum lycopersicum HOM05D005319 ORTHO05D006632 7.2e-23 111.7 376 30.9
Sopen01g045380 Solanum pennellii HOM05D005319 ORTHO05D006632 7.9e-22 108.2 376 30.3
Gorai.009G114100 Gossypium raimondii HOM05D005319 ORTHO05D006632 1.4e-21 107.5 379 30.1
Haze_09972 Corylus avellana HOM05D005319 ORTHO05D006632 2.3e-21 106.7 351 33.6
Gohir.A05G109700 Gossypium hirsutum HOM05D005319 ORTHO05D006632 2.3e-21 106.7 379 30.1
GSVIVG01023136001 Vitis vinifera HOM05D005319 ORTHO05D006632 6.7e-21 105.1 370 32.4
CSS0036760 Camellia sinensis var. sinensis HOM05D005319 ORTHO05D006632 8.8e-21 104.8 386 30.8
Thecc.06G020300 Theobroma cacao HOM05D005319 ORTHO05D006632 1.1e-20 104.4 380 30.3
Cfa004432 Carpinus fangiana HOM05D005319 ORTHO05D006632 2.0e-20 103.6 369 32.8
Gohir.D05G110000 Gossypium hirsutum HOM05D005319 ORTHO05D006632 3.3e-20 102.8 379 29.6
CSS0030211 Camellia sinensis var. sinensis HOM05D005319 ORTHO05D006632 2.2e-19 100.1 366 32.0
Oeu043603.1 Olea europaea HOM05D005319 ORTHO05D006632 2.8e-19 99.8 139 48.9
vmacro19823 Vaccinium macrocarpon HOM05D005319 ORTHO05D006632 2.8e-19 99.8 408 28.7
Cpa.g.sc173.4 Carica papaya HOM05D005319 ORTHO05D006632 3.7e-19 99.4 298 33.6
Gohir.D10G083500 Gossypium hirsutum HOM05D005319 ORTHO05D006632 4.8e-19 99.0 380 28.7
PGR142G1786 Punica granatum HOM05D005319 ORTHO05D006632 4.8e-19 99.0 381 30.4
Cc02_g23690 Coffea canephora HOM05D005319 ORTHO05D006632 8.2e-19 98.2 375 30.9
COL.COLO4_31114 Corchorus olitorius HOM05D005319 ORTHO05D006632 1.1e-18 97.8 375 30.7
Gohir.A10G157900 Gossypium hirsutum HOM05D005319 ORTHO05D006632 1.4e-18 97.4 367 28.6
Lj6A128G22 Lonicera japonica HOM05D005319 ORTHO05D006632 1.4e-18 97.4 72 75.0
Duzib192G0868 Durio zibethinus HOM05D005319 ORTHO05D006632 1.8e-18 97.1 390 30.3
MSTRG.16462 Avicennia marina HOM05D005319 ORTHO05D006632 3.1e-18 96.3 377 29.4
QL02p103594 Quercus lobata HOM05D005319 ORTHO05D006632 3.1e-18 96.3 369 31.4
Ciclev10000238m.g Citrus clementina HOM05D005319 ORTHO05D006632 5.3e-18 95.5 374 30.7
Sc12g0006940 Simmondsia chinensis HOM05D005319 ORTHO05D006632 7.0e-18 95.1 359 31.2
Manes.07G031200 Manihot esculenta HOM05D005319 ORTHO05D006632 9.1e-18 94.7 362 31.5
ECA240G4281 Erigeron canadensis HOM05D005319 ORTHO05D006632 1.6e-17 94.0 349 28.9
Hund15346 Selenicereus undatus HOM05D005319 ORTHO05D006632 2.0e-17 93.6 302 30.8
Gorai.011G090800 Gossypium raimondii HOM05D005319 ORTHO05D006632 7.7e-17 91.7 380 28.4
Atru.chr6.211 Acer truncatum HOM05D005319 ORTHO05D006632 6.5e-16 88.6 360 29.2
DCAR_003273 Daucus carota HOM05D005319 ORTHO05D006632 2.5e-15 86.7 299 30.8
unitig_8.g2963 Utricularia gibba HOM05D005319 ORTHO05D006632 2.5e-15 86.7 357 28.0
TWI59G0928 Tripterygium wilfordii HOM05D005319 ORTHO05D006632 4.2e-15 85.9 372 29.6
Medtr8g015930 Medicago truncatula HOM05D005319 ORTHO05D006632 1.2e-14 84.3 178 38.2
Psat1g223960 Pisum sativum HOM05D005319 ORTHO05D006632 1.6e-14 84.0 374 27.8
Eucgr.I02798 Eucalyptus grandis HOM05D005319 ORTHO05D006632 2.1e-14 83.6 186 37.6
Prupe.1G586100 Prunus persica HOM05D005319 ORTHO05D006632 2.1e-14 83.6 361 29.6
Prupe.2G119000 Prunus persica HOM05D005319 ORTHO05D006632 2.1e-14 83.6 334 29.6
AUR62042963 Chenopodium quinoa HOM05D005319 ORTHO05D006632 3.6e-14 82.8 359 29.8
FvH4_5g27610 Fragaria vesca HOM05D005319 ORTHO05D006632 4.7e-14 82.4 336 30.1
HanXRQChr03g0090101 Helianthus annuus HOM05D005319 ORTHO05D006632 4.7e-14 82.4 346 30.3
AUR62041124 Chenopodium quinoa HOM05D005319 ORTHO05D006632 8.0e-14 81.6 361 29.9
FAN18G0588 Fragaria x ananassa HOM05D005319 ORTHO05D006632 8.0e-14 81.6 340 30.0
RcHm_v2.0_Chr7g0219031 Rosa chinensis HOM05D005319 ORTHO05D006632 8.0e-14 81.6 356 28.9
TAR628G0438 Trochodendron aralioides HOM05D005319 ORTHO05D006632 1.0e-13 81.3 384 28.1
FAN13G2205 Fragaria x ananassa HOM05D005319 ORTHO05D006632 1.4e-13 80.9 340 30.3
Migut.B00712 Erythranthe guttata HOM05D005319 ORTHO05D006632 1.8e-13 80.5 141 41.1
CANSAT01G0698 Cannabis sativa HOM05D005319 ORTHO05D006632 2.3e-13 80.1 180 38.9
VMungo1127G0564 Vigna mungo HOM05D005319 ORTHO05D006632 4.0e-13 79.3 368 28.0
MD15G1443600 Malus domestica HOM05D005319 ORTHO05D006632 5.2e-13 79.0 371 28.6
Dinv29683 Davidia involucrata HOM05D005319 ORTHO05D006632 8.8e-13 78.2 114 48.2
FAN04G2290 Fragaria x ananassa HOM05D005319 ORTHO05D006632 1.2e-12 77.8 307 30.9
Lalb_Chr18g0061161 Lupinus albus HOM05D005319 ORTHO05D006632 1.2e-12 77.8 359 28.1
ECA247G0718 Erigeron canadensis HOM05D005319 ORTHO05D006632 1.5e-12 77.4 355 27.0
MD08G1248800 Malus domestica HOM05D005319 ORTHO05D006632 1.5e-12 77.4 368 28.8
Glyma.12G164200 Glycine max HOM05D005319 ORTHO05D006632 2.0e-12 77.0 374 28.6
EL10As26g24244 Beta vulgaris HOM05D005319 ORTHO05D006632 3.3e-12 76.3 355 28.5
SGA_v2.0_scaffold254G45232 Striga asiatica HOM05D005319 ORTHO05D006632 4.4e-12 75.9 140 40.7
TPR.G5958 Trifolium pratense HOM05D005319 ORTHO05D006632 5.7e-12 75.5 182 35.7
Ca_00016_v3 Cicer arietinum L. HOM05D005319 ORTHO05D006632 1.7e-11 73.9 199 34.7
Lj5g0014697 Lotus japonicus HOM05D005319 ORTHO05D006632 1.7e-11 73.9 360 27.2
Phvul.006G221600 Phaseolus vulgaris HOM05D005319 ORTHO05D006632 2.2e-11 73.6 375 26.9
Sabra01G0174900 Salix brachista HOM05D005319 ORTHO05D006632 2.8e-11 73.2 206 35.9
Sed0027556 Sechium edule HOM05D005319 ORTHO05D006632 3.7e-11 72.8 361 28.3
Aa31LG7G10320 Aethionema arabicum HOM05D005319 ORTHO05D006632 4.8e-11 72.4 182 34.6
CsaV3_5G027480 Cucumis sativus L. HOM05D005319 ORTHO05D006632 4.8e-11 72.4 369 28.2
THA.LOC104806623 Tarenaya hassleriana HOM05D005319 ORTHO05D006632 4.8e-11 72.4 366 27.0
C01p19580 Brassica napus HOM05D005319 ORTHO05D006632 6.3e-11 72.0 164 34.1
BolC1t01883H Brassica oleracea HOM05D005319 ORTHO05D006632 6.3e-11 72.0 164 34.1
Glyma.16G000500 Glycine max HOM05D005319 ORTHO05D006632 1.1e-10 71.2 375 26.9
BcaNung01135 Brassica carinata HOM05D005319 ORTHO05D006632 1.8e-10 70.5 176 33.5
A01p15600 Brassica napus HOM05D005319 ORTHO05D006632 1.8e-10 70.5 176 33.5
ClCG11G000090 Citrullus lanatus HOM05D005319 ORTHO05D006632 3.1e-10 69.7 344 29.1
Potri.004G229732 Populus trichocarpa HOM05D005319 ORTHO05D006632 3.1e-10 69.7 194 36.6
Lsat_1_v5_gn_9_125320 Lactuca sativa HOM05D005319 ORTHO05D006632 4.1e-10 69.3 326 30.4
EL10Ac9g22556 Beta vulgaris HOM05D005319 ORTHO05D006632 1.2e-09 67.8 61 67.2
BcaC09g50887 Brassica carinata HOM05D005319 ORTHO05D006632 1.2e-09 67.8 141 35.5
Aqoxy6G00019 Aquilegia oxysepala HOM05D005319 ORTHO05D006632 2.7e-09 66.6 180 37.2
Nn5g27146 Nelumbo nucifera HOM05D005319 ORTHO05D006632 2.7e-09 66.6 195 35.4
Thhalv10024416m.g Eutrema salsugineum HOM05D005319 ORTHO05D006632 3.5e-09 66.2 177 35.0
EL10Ac6g13976 Beta vulgaris HOM05D005319 ORTHO05D006632 4.5e-09 65.9 104 51.0
Sp7g22260 Schrenkiella parvula HOM05D005319 ORTHO05D006632 4.5e-09 65.9 174 34.5
BraA01t01501Z Brassica rapa HOM05D005319 ORTHO05D006632 7.7e-09 65.1 351 25.1
MELO3C022920.2 Cucumis melo HOM05D005319 ORTHO05D006632 1.0e-08 64.7 365 27.4
PSO017G2844 Papaver somniferum HOM05D005319 ORTHO05D006632 1.7e-08 63.9 373 28.2
PSO170G3892 Papaver somniferum HOM05D005319 ORTHO05D006632 1.7e-08 63.9 175 33.1
CDE07G1780 Ceratophyllum demersum HOM05D005319 ORTHO05D006632 2.9e-08 63.2 110 42.7
Carub.0007s1678 Capsella rubella HOM05D005319 ORTHO05D006632 8.5e-08 61.6 174 32.8
arahy.Tifrunner.gnm1.ann1.2TW5YI Arachis hypogaea HOM05D005319 ORTHO05D006632 2.5e-07 60.1 170 34.1
Nn4g24765 Nelumbo nucifera HOM05D005319 ORTHO05D006632 2.5e-07 60.1 186 36.0
CiPaw.05G159200 Carya illinoinensis HOM05D005319 ORTHO05D006632 3.2e-07 59.7 130 37.7
HPP92_001202 Vanilla planifolia HOM05D005319 ORTHO05D006632 7.2e-07 58.5 176 34.7
CARHR231700 Cardamine hirsuta HOM05D005319 ORTHO05D006632 4.7e-06 55.8 350 24.6
MBI03_g34263_MAGBIO Magnolia biondii HOM05D005319 ORTHO05D006632 4.7e-06 55.8 187 33.2
AL7G28980 Arabidopsis lyrata HOM05D005319 ORTHO05D006632 6.1e-06 55.5 176 32.4


User provided reference genes

Program Settings