Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A1159T86 Lonicera japonica HOM05D003008 ORTHO05D003346 3.4e-67 258.1 121 100.0
Dinv26204 Davidia involucrata HOM05D003008 ORTHO05D003346 4.1e-36 154.8 124 59.7
Migut.M01921 Erythranthe guttata HOM05D003008 ORTHO05D003346 2.5e-33 145.6 123 56.1
ECA233G3161 Erigeron canadensis HOM05D003008 ORTHO05D003346 5.7e-30 134.4 98 58.2
HanXRQChr01g0020621 Helianthus annuus HOM05D003008 ORTHO05D003346 5.7e-30 134.4 118 55.1
DCAR_007819 Daucus carota HOM05D003008 ORTHO05D003346 8.3e-29 130.6 108 57.4
Sabra16G0312900 Salix brachista HOM05D003008 ORTHO05D003346 1.4e-28 129.8 121 49.6
Cfa000776 Carpinus fangiana HOM05D003008 ORTHO05D003346 1.8e-28 129.4 115 53.9
Sabra16G0312700 Salix brachista HOM05D003008 ORTHO05D003346 3.2e-28 128.6 121 48.8
TWI63G0820 Tripterygium wilfordii HOM05D003008 ORTHO05D003346 3.2e-28 128.6 108 54.6
Lsat_1_v5_gn_1_91780 Lactuca sativa HOM05D003008 ORTHO05D003346 5.4e-28 127.9 116 55.2
Potri.001G461200 Populus trichocarpa HOM05D003008 ORTHO05D003346 7.0e-28 127.5 121 50.4
Actinidia33693 Actinidia chinensis HOM05D003008 ORTHO05D003346 4.6e-27 124.8 118 45.8
Haze_05935 Corylus avellana HOM05D003008 ORTHO05D003346 5.9e-27 124.4 115 52.2
Lsat_1_v5_gn_8_128321 Lactuca sativa HOM05D003008 ORTHO05D003346 5.9e-27 124.4 116 54.3
Manes.09G088066 Manihot esculenta HOM05D003008 ORTHO05D003346 3.0e-26 122.1 107 51.4
Nitab4.5_0001181g0080 Nicotiana tabacum HOM05D003008 ORTHO05D003346 3.9e-26 121.7 117 54.7
Prupe.4G099900 Prunus persica HOM05D003008 ORTHO05D003346 6.6e-26 120.9 122 51.6
MD05G1265600 Malus domestica HOM05D003008 ORTHO05D003346 8.6e-26 120.6 121 49.6
Solyc02g070230.2 Solanum lycopersicum HOM05D003008 ORTHO05D003346 8.6e-26 120.6 115 51.3
Glyma.09G028800 Glycine max HOM05D003008 ORTHO05D003346 1.1e-25 120.2 104 59.6
Phvul.006G124200 Phaseolus vulgaris HOM05D003008 ORTHO05D003346 1.5e-25 119.8 109 55.0
RcHm_v2.0_Chr5g0018141 Rosa chinensis HOM05D003008 ORTHO05D003346 4.3e-25 118.2 115 50.4
TPR.G8027 Trifolium pratense HOM05D003008 ORTHO05D003346 5.6e-25 117.9 98 59.2
Ca_00892_v3 Cicer arietinum L. HOM05D003008 ORTHO05D003346 9.5e-25 117.1 108 52.8
CAN.G660.46 Capsicum annuum HOM05D003008 ORTHO05D003346 1.2e-24 116.7 125 47.2
QL05p064497 Quercus lobata HOM05D003008 ORTHO05D003346 1.2e-24 116.7 108 50.9
Sopen02g019320 Solanum pennellii HOM05D003008 ORTHO05D003346 1.2e-24 116.7 115 49.6
SalBow8G1795 Salvia bowleyana HOM05D003008 ORTHO05D003346 1.6e-24 116.3 108 52.8
arahy.Tifrunner.gnm1.ann1.MYLU20 Arachis hypogaea HOM05D003008 ORTHO05D003346 2.1e-24 115.9 120 49.2
arahy.Tifrunner.gnm1.ann1.57FUCZ Arachis hypogaea HOM05D003008 ORTHO05D003346 6.2e-24 114.4 121 49.6
MSTRG.7558 Avicennia marina HOM05D003008 ORTHO05D003346 8.0e-24 114.0 96 55.2
Psat1g164720 Pisum sativum HOM05D003008 ORTHO05D003346 1.4e-23 113.2 98 55.1
PGSC0003DMG400021105 Solanum tuberosum HOM05D003008 ORTHO05D003346 1.4e-23 113.2 121 47.1
Ciclev10015609m.g Citrus clementina HOM05D003008 ORTHO05D003346 1.8e-23 112.8 112 50.9
ClCG03G008500 Citrullus lanatus HOM05D003008 ORTHO05D003346 2.3e-23 112.5 116 44.0
TAR626G0717 Trochodendron aralioides HOM05D003008 ORTHO05D003346 3.1e-23 112.1 106 52.8
Atru.chr10.698 Acer truncatum HOM05D003008 ORTHO05D003346 4.0e-23 111.7 114 46.5
Eucgr.D01012 Eucalyptus grandis HOM05D003008 ORTHO05D003346 5.2e-23 111.3 106 50.9
Glyma.09G028600 Glycine max HOM05D003008 ORTHO05D003346 5.2e-23 111.3 119 46.2
Lj6g0000719 Lotus japonicus HOM05D003008 ORTHO05D003346 5.2e-23 111.3 123 47.2
Lalb_Chr18g0058251 Lupinus albus HOM05D003008 ORTHO05D003346 5.2e-23 111.3 116 50.9
CANSAT64G0697 Cannabis sativa HOM05D003008 ORTHO05D003346 6.8e-23 110.9 119 47.1
Nn7g37799 Nelumbo nucifera HOM05D003008 ORTHO05D003346 8.9e-23 110.5 122 48.4
FAN21G3010 Fragaria x ananassa HOM05D003008 ORTHO05D003346 1.5e-22 109.8 125 45.6
Medtr2g031740 Medicago truncatula HOM05D003008 ORTHO05D003346 2.0e-22 109.4 106 51.9
Cc09_g07360 Coffea canephora HOM05D003008 ORTHO05D003346 3.4e-22 108.6 123 46.3
FvH4_3g11200 Fragaria vesca HOM05D003008 ORTHO05D003346 3.4e-22 108.6 124 45.2
Sopen02g006420 Solanum pennellii HOM05D003008 ORTHO05D003346 5.8e-22 107.8 127 46.5
arahy.Tifrunner.gnm1.ann1.SN2S9U Arachis hypogaea HOM05D003008 ORTHO05D003346 7.5e-22 107.5 126 43.7
arahy.Tifrunner.gnm1.ann1.WH7KDQ Arachis hypogaea HOM05D003008 ORTHO05D003346 7.5e-22 107.5 126 43.7
CsaV3_1G037590 Cucumis sativus L. HOM05D003008 ORTHO05D003346 7.5e-22 107.5 95 49.5
Medtr2g031620 Medicago truncatula HOM05D003008 ORTHO05D003346 7.5e-22 107.5 108 48.1
Phvul.006G124400 Phaseolus vulgaris HOM05D003008 ORTHO05D003346 7.5e-22 107.5 110 46.4
Solyc02g022830.3 Solanum lycopersicum HOM05D003008 ORTHO05D003346 7.5e-22 107.5 127 46.5
Glyma.15G134500 Glycine max HOM05D003008 ORTHO05D003346 9.8e-22 107.1 109 45.9
Sed0001268 Sechium edule HOM05D003008 ORTHO05D003346 9.8e-22 107.1 106 47.2
CDE01G0377 Ceratophyllum demersum HOM05D003008 ORTHO05D003346 1.7e-21 106.3 124 44.4
Migut.M01920 Erythranthe guttata HOM05D003008 ORTHO05D003346 1.7e-21 106.3 117 43.6
QL03p057306 Quercus lobata HOM05D003008 ORTHO05D003346 1.7e-21 106.3 111 43.2
Rhsim13G0124700 Rhododendron simsii HOM05D003008 ORTHO05D003346 1.7e-21 106.3 118 39.8
Sed0021502 Sechium edule HOM05D003008 ORTHO05D003346 2.2e-21 105.9 113 44.2
Thecc.06G011100 Theobroma cacao HOM05D003008 ORTHO05D003346 2.2e-21 105.9 111 45.0
SalBow8G1512 Salvia bowleyana HOM05D003008 ORTHO05D003346 2.9e-21 105.5 111 42.3
CiPaw.03G113700 Carya illinoinensis HOM05D003008 ORTHO05D003346 3.7e-21 105.1 122 42.6
Ca_25498_v3 Cicer arietinum L. HOM05D003008 ORTHO05D003346 3.7e-21 105.1 107 43.9
MD10G1243800 Malus domestica HOM05D003008 ORTHO05D003346 4.9e-21 104.8 124 43.5
Cfa023567 Carpinus fangiana HOM05D003008 ORTHO05D003346 6.4e-21 104.4 103 44.7
Lalb_Chr15g0088941 Lupinus albus HOM05D003008 ORTHO05D003346 6.4e-21 104.4 121 43.0
VMungo0540G1323 Vigna mungo HOM05D003008 ORTHO05D003346 6.4e-21 104.4 123 41.5
CDE02G0274 Ceratophyllum demersum HOM05D003008 ORTHO05D003346 1.1e-20 103.6 114 43.0
Medtr5g099220 Medicago truncatula HOM05D003008 ORTHO05D003346 1.1e-20 103.6 102 52.0
Lalb_Chr18g0058241 Lupinus albus HOM05D003008 ORTHO05D003346 1.9e-20 102.8 105 43.8
CSS0037242 Camellia sinensis var. sinensis HOM05D003008 ORTHO05D003346 2.4e-20 102.4 115 46.1
CSS0042083 Camellia sinensis var. sinensis HOM05D003008 ORTHO05D003346 2.4e-20 102.4 116 44.0
CAN.G39.23 Capsicum annuum HOM05D003008 ORTHO05D003346 2.4e-20 102.4 109 48.6
Cc02_g32870 Coffea canephora HOM05D003008 ORTHO05D003346 4.1e-20 101.7 118 42.4
Oeu060320.2 Olea europaea HOM05D003008 ORTHO05D003346 4.1e-20 101.7 126 40.5
Prupe.4G099700 Prunus persica HOM05D003008 ORTHO05D003346 4.1e-20 101.7 127 41.7
ATR0763G210 Amborella trichopoda HOM05D003008 ORTHO05D003346 7.0e-20 100.9 134 35.8
Nitab4.5_0000076g0040 Nicotiana tabacum HOM05D003008 ORTHO05D003346 7.0e-20 100.9 123 47.2
Actinidia33712 Actinidia chinensis HOM05D003008 ORTHO05D003346 9.2e-20 100.5 123 40.7
Aqoxy1G01512 Aquilegia oxysepala HOM05D003008 ORTHO05D003346 9.2e-20 100.5 125 40.0
Dinv08829 Davidia involucrata HOM05D003008 ORTHO05D003346 1.2e-19 100.1 125 42.4
vmacro03472 Vaccinium macrocarpon HOM05D003008 ORTHO05D003346 3.5e-19 98.6 121 46.3
Eucgr.D01628 Eucalyptus grandis HOM05D003008 ORTHO05D003346 4.6e-19 98.2 108 42.6
Hma1.2p1_1413F.1_g281810 Hydrangea macrophylla HOM05D003008 ORTHO05D003346 6.0e-19 97.8 124 40.3
Rhsim13G0124600 Rhododendron simsii HOM05D003008 ORTHO05D003346 6.0e-19 97.8 102 49.0
CsaV3_1G037560 Cucumis sativus L. HOM05D003008 ORTHO05D003346 7.8e-19 97.4 110 40.0
unitig_92.g28180 Utricularia gibba HOM05D003008 ORTHO05D003346 7.8e-19 97.4 98 45.9
Peaxi162Scf00155g00316 Petunia axillaris HOM05D003008 ORTHO05D003346 1.0e-18 97.1 115 45.2
Lj6g0020929 Lotus japonicus HOM05D003008 ORTHO05D003346 1.3e-18 96.7 112 42.0
RcHm_v2.0_Chr5g0018171 Rosa chinensis HOM05D003008 ORTHO05D003346 1.7e-18 96.3 120 38.3
DCAR_007820 Daucus carota HOM05D003008 ORTHO05D003346 2.3e-18 95.9 121 39.7
FAN16G0127 Fragaria x ananassa HOM05D003008 ORTHO05D003346 2.3e-18 95.9 120 39.2
FAN16G1739 Fragaria x ananassa HOM05D003008 ORTHO05D003346 2.3e-18 95.9 150 38.0
Thecc.06G011200 Theobroma cacao HOM05D003008 ORTHO05D003346 2.3e-18 95.9 125 38.4
Aa31LG6G11900 Aethionema arabicum HOM05D003008 ORTHO05D003346 3.0e-18 95.5 115 45.2
THA.LOC104798583 Tarenaya hassleriana HOM05D003008 ORTHO05D003346 3.0e-18 95.5 111 43.2
AT1G30680 Arabidopsis thaliana HOM05D003008 ORTHO05D003346 3.9e-18 95.1 115 41.7
MELO3C002865.2 Cucumis melo HOM05D003008 ORTHO05D003346 3.9e-18 95.1 122 39.3
FvH4_3g11220 Fragaria vesca HOM05D003008 ORTHO05D003346 5.0e-18 94.7 120 38.3
FAN25G1216 Fragaria x ananassa HOM05D003008 ORTHO05D003346 5.0e-18 94.7 141 37.6
FAN21G3776 Fragaria x ananassa HOM05D003008 ORTHO05D003346 6.6e-18 94.4 119 41.2
SGA_v2.0_scaffold306G48030 Striga asiatica HOM05D003008 ORTHO05D003346 8.6e-18 94.0 127 40.2
EL10Ac8g19523 Beta vulgaris HOM05D003008 ORTHO05D003346 1.1e-17 93.6 110 41.8
unitig_92.g28176 Utricularia gibba HOM05D003008 ORTHO05D003346 1.1e-17 93.6 110 40.0
SalBow8G4789 Salvia bowleyana HOM05D003008 ORTHO05D003346 1.5e-17 93.2 122 37.7
Manes.14G125700 Manihot esculenta HOM05D003008 ORTHO05D003346 1.9e-17 92.8 113 39.8
CANSAT35G1991 Cannabis sativa HOM05D003008 ORTHO05D003346 2.5e-17 92.4 120 37.5
AL1G44740 Arabidopsis lyrata HOM05D003008 ORTHO05D003346 3.3e-17 92.0 115 42.6
Aqoxy7G01281 Aquilegia oxysepala HOM05D003008 ORTHO05D003346 4.3e-17 91.7 123 41.5
Carub.0001s2896 Capsella rubella HOM05D003008 ORTHO05D003346 4.3e-17 91.7 122 40.2
Duzib160G0679 Durio zibethinus HOM05D003008 ORTHO05D003346 4.3e-17 91.7 103 43.7
Lsat_1_v5_gn_1_91720 Lactuca sativa HOM05D003008 ORTHO05D003346 4.3e-17 91.7 112 42.9
PGR044G1782 Punica granatum HOM05D003008 ORTHO05D003346 9.5e-17 90.5 104 41.3
Sp1g26580 Schrenkiella parvula HOM05D003008 ORTHO05D003346 9.5e-17 90.5 115 43.5
SGA_v2.0_scaffold223G42877 Striga asiatica HOM05D003008 ORTHO05D003346 9.5e-17 90.5 105 41.9
Nitab4.5_0002005g0070 Nicotiana tabacum HOM05D003008 ORTHO05D003346 1.2e-16 90.1 88 52.3
SGA_v2.0_scaffold1G00291 Striga asiatica HOM05D003008 ORTHO05D003346 1.2e-16 90.1 109 41.3
FAN25G1988 Fragaria x ananassa HOM05D003008 ORTHO05D003346 1.6e-16 89.7 120 38.3
GSVIVG01008778001 Vitis vinifera HOM05D003008 ORTHO05D003346 2.1e-16 89.4 111 38.7
HPP92_013208 Vanilla planifolia HOM05D003008 ORTHO05D003346 3.6e-16 88.6 110 43.6
Ciclev10014667m.g Citrus clementina HOM05D003008 ORTHO05D003346 4.7e-16 88.2 104 40.4
Lj1C1159T8 Lonicera japonica HOM05D003008 ORTHO05D003346 4.7e-16 88.2 120 40.0
Duzib235G1093 Durio zibethinus HOM05D003008 ORTHO05D003346 8.1e-16 87.4 125 36.8
Peaxi162Scf00701g00055 Petunia axillaris HOM05D003008 ORTHO05D003346 8.1e-16 87.4 115 40.9
Haze_13591 Corylus avellana HOM05D003008 ORTHO05D003346 1.1e-15 87.0 127 36.2
HanXRQChr01g0020641 Helianthus annuus HOM05D003008 ORTHO05D003346 1.1e-15 87.0 119 37.8
AUR62025821 Chenopodium quinoa HOM05D003008 ORTHO05D003346 1.4e-15 86.7 120 35.8
AUR62029886 Chenopodium quinoa HOM05D003008 ORTHO05D003346 1.4e-15 86.7 120 35.8
Potri.001G461300 Populus trichocarpa HOM05D003008 ORTHO05D003346 1.8e-15 86.3 111 41.4
Sabra16G0312800 Salix brachista HOM05D003008 ORTHO05D003346 1.8e-15 86.3 117 42.7
COL.COLO4_22894 Corchorus olitorius HOM05D003008 ORTHO05D003346 2.3e-15 85.9 115 36.5
Psat1g164800 Pisum sativum HOM05D003008 ORTHO05D003346 2.3e-15 85.9 104 40.4
CARHR030150 Cardamine hirsuta HOM05D003008 ORTHO05D003346 3.1e-15 85.5 115 40.0
BcaC05g27092 Brassica carinata HOM05D003008 ORTHO05D003346 5.2e-15 84.7 98 45.9
C05p29740 Brassica napus HOM05D003008 ORTHO05D003346 5.2e-15 84.7 98 45.9
COL.COLO4_22895 Corchorus olitorius HOM05D003008 ORTHO05D003346 5.2e-15 84.7 109 42.2
Thhalv10006950m.g Eutrema salsugineum HOM05D003008 ORTHO05D003346 5.2e-15 84.7 112 40.2
Sabra16G0313000 Salix brachista HOM05D003008 ORTHO05D003346 1.2e-14 83.6 110 42.7
Cpa.g.sc489.1 Carica papaya HOM05D003008 ORTHO05D003346 1.5e-14 83.2 133 34.6
PSO541G5492 Papaver somniferum HOM05D003008 ORTHO05D003346 1.5e-14 83.2 125 38.4
ECA248G0148 Erigeron canadensis HOM05D003008 ORTHO05D003346 3.4e-14 82.0 121 36.4
GSVIVG01021728001 Vitis vinifera HOM05D003008 ORTHO05D003346 3.4e-14 82.0 107 39.3
A09p35720 Brassica napus HOM05D003008 ORTHO05D003346 4.4e-14 81.6 98 43.9
Gohir.D05G112900 Gossypium hirsutum HOM05D003008 ORTHO05D003346 4.4e-14 81.6 126 38.1
GSVIVG01021741001 Vitis vinifera HOM05D003008 ORTHO05D003346 4.4e-14 81.6 107 37.4
Nitab4.5_0011416g0030 Nicotiana tabacum HOM05D003008 ORTHO05D003346 7.5e-14 80.9 142 37.3
Atru.chr10.699 Acer truncatum HOM05D003008 ORTHO05D003346 1.3e-13 80.1 106 39.6
BcaB07g32707 Brassica carinata HOM05D003008 ORTHO05D003346 1.3e-13 80.1 98 43.9
BolC5t31702H Brassica oleracea HOM05D003008 ORTHO05D003346 1.7e-13 79.7 107 40.2
Lj2A336T37 Lonicera japonica HOM05D003008 ORTHO05D003346 1.7e-13 79.7 104 37.5
PSO675G7488 Papaver somniferum HOM05D003008 ORTHO05D003346 1.7e-13 79.7 125 38.4
BraA09t39097Z Brassica rapa HOM05D003008 ORTHO05D003346 4.9e-13 78.2 107 39.3
AT1G30660 Arabidopsis thaliana HOM05D003008 ORTHO05D003346 6.4e-13 77.8 112 38.4
Gorai.009G117100 Gossypium raimondii HOM05D003008 ORTHO05D003346 6.4e-13 77.8 128 36.7
PSO063G4114 Papaver somniferum HOM05D003008 ORTHO05D003346 6.4e-13 77.8 76 46.1
TWI15G0228 Tripterygium wilfordii HOM05D003008 ORTHO05D003346 6.4e-13 77.8 103 38.8
Gohir.A05G112501 Gossypium hirsutum HOM05D003008 ORTHO05D003346 8.3e-13 77.4 126 35.7
Sc10g0009650 Simmondsia chinensis HOM05D003008 ORTHO05D003346 8.3e-13 77.4 83 44.6
TPR.G15179 Trifolium pratense HOM05D003008 ORTHO05D003346 1.1e-12 77.0 119 37.0
Gohir.D05G113000 Gossypium hirsutum HOM05D003008 ORTHO05D003346 1.4e-12 76.6 126 35.7
Oeu058494.1 Olea europaea HOM05D000022 ORTHO05D000071 1.4e-12 76.6 121 38.0
AL1G44720 Arabidopsis lyrata HOM05D003008 ORTHO05D003346 1.9e-12 76.3 116 37.1
GSVIVG01037928001 Vitis vinifera HOM05D003008 ORTHO05D003346 1.2e-11 73.6 67 47.8
CiPaw.09G146400 Carya illinoinensis HOM05D003008 ORTHO05D003346 3.5e-11 72.0 68 48.5
Oeu060323.2 Olea europaea HOM05D000022 ORTHO05D000071 1.3e-10 70.1 122 33.6
Zm00001eb274090 Zea mays HOM05D003008 ORTHO05D003346 1.3e-10 70.1 102 34.3
vmacro02674 Vaccinium macrocarpon HOM05D003008 ORTHO05D003346 1.7e-10 69.7 58 53.4
SEGI_26502 Sequoiadendron giganteum HOM05D003008 ORTHO05D003346 7.3e-09 64.3 87 37.9
CSS0015182 Camellia sinensis var. sinensis HOM05D002511 ORTHO05D026376 4.7e-08 61.6 53 49.1
unitig_92.g28223 Utricularia gibba HOM05D003008 ORTHO05D003346 4.7e-08 61.6 79 36.7
arahy.Tifrunner.gnm1.ann1.28UEMM Arachis hypogaea HOM05D003008 ORTHO05D003346 3.4e-06 55.5 53 52.8
CBR_g16946 Chara braunii HOM05D003008 ORTHO05D003346 3.4e-06 55.5 63 42.9
CBR_g38556 Chara braunii HOM05D003008 ORTHO05D003346 3.4e-06 55.5 63 42.9
MCO14G370 Micromonas commoda HOM05D003008 ORTHO05D003346 3.4e-06 55.5 54 40.7
SMO364G0389 Selaginella moellendorffii HOM05D003008 ORTHO05D003346 7.6e-06 54.3 92 30.4


User provided reference genes

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