Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A1094G14 Lonicera japonica HOM05D003729 ORTHO05D004384 3.3e-140 501.9 268 100.0
Dinv34365 Davidia involucrata HOM05D003729 ORTHO05D004384 2.1e-86 323.2 274 66.8
Dinv26813 Davidia involucrata HOM05D003729 ORTHO05D004384 3.6e-86 322.4 273 66.7
GSVIVG01033615001 Vitis vinifera HOM05D003729 ORTHO05D004384 1.1e-82 310.8 261 67.0
CSS0000349 Camellia sinensis var. sinensis HOM05D003729 ORTHO05D004384 7.1e-82 308.1 262 66.8
Hma1.2p1_0402F.1_g145090 Hydrangea macrophylla HOM05D003729 ORTHO05D004384 2.3e-80 303.1 263 65.8
Cc06_g19080 Coffea canephora HOM05D003729 ORTHO05D004384 2.5e-79 299.7 258 67.4
CiPaw.09G047000 Carya illinoinensis HOM05D003729 ORTHO05D004384 2.1e-78 296.6 259 64.5
Actinidia38159 Actinidia chinensis HOM05D003729 ORTHO05D004384 1.4e-77 293.9 261 67.0
Nn7g37723 Nelumbo nucifera HOM05D003729 ORTHO05D004384 3.1e-77 292.7 258 65.1
vmacro09025 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 4.0e-77 292.4 262 68.7
Rhsim04G0111000 Rhododendron simsii HOM05D003729 ORTHO05D004384 5.3e-77 292.0 262 65.3
QL06p031735 Quercus lobata HOM05D003729 ORTHO05D004384 6.9e-77 291.6 260 61.9
TAR629G1039 Trochodendron aralioides HOM05D003729 ORTHO05D004384 1.2e-76 290.8 262 63.7
Manes.15G116200 Manihot esculenta HOM05D003729 ORTHO05D004384 2.0e-76 290.0 263 62.4
Atru.chr11.1446 Acer truncatum HOM05D003729 ORTHO05D004384 2.4e-74 283.1 270 60.4
Atru.chr11.1476 Acer truncatum HOM05D003729 ORTHO05D004384 2.4e-74 283.1 270 60.4
Nitab4.5_0000381g0340 Nicotiana tabacum HOM05D003729 ORTHO05D004384 4.2e-74 282.3 258 61.6
Eucgr.B01227 Eucalyptus grandis HOM05D003729 ORTHO05D004384 5.4e-74 282.0 260 61.5
DCAR_013638 Daucus carota HOM05D003729 ORTHO05D004384 2.7e-73 279.6 259 62.9
VMungo0464G0714 Vigna mungo HOM05D003729 ORTHO05D004384 2.7e-73 279.6 260 58.1
Sopen10g034990 Solanum pennellii HOM05D003729 ORTHO05D004384 4.6e-73 278.9 254 61.8
Glyma.07G106900 Glycine max HOM05D003729 ORTHO05D004384 2.3e-72 276.6 262 56.5
Gohir.A11G307900 Gossypium hirsutum HOM05D003729 ORTHO05D004384 5.1e-72 275.4 261 59.4
Nitab4.5_0005447g0050 Nicotiana tabacum HOM05D003729 ORTHO05D004384 5.1e-72 275.4 258 62.8
Gohir.D11G323300 Gossypium hirsutum HOM05D003729 ORTHO05D004384 6.6e-72 275.0 263 60.1
Gorai.007G353300 Gossypium raimondii HOM05D003729 ORTHO05D004384 6.6e-72 275.0 263 60.1
Glyma.09G171000 Glycine max HOM05D003729 ORTHO05D004384 8.7e-72 274.6 262 55.7
Phvul.004G146700 Phaseolus vulgaris HOM05D003729 ORTHO05D004384 1.1e-71 274.2 261 57.1
MELO3C018665.2 Cucumis melo HOM05D003729 ORTHO05D004384 1.9e-71 273.5 242 62.0
Prupe.5G014500 Prunus persica HOM05D003729 ORTHO05D004384 1.9e-71 273.5 260 60.0
ClCG09G015010 Citrullus lanatus HOM05D003729 ORTHO05D004384 5.6e-71 271.9 243 60.5
Lsat_1_v5_gn_5_75341 Lactuca sativa HOM05D003729 ORTHO05D004384 7.3e-71 271.6 266 60.9
HanXRQChr12g0359771 Helianthus annuus HOM05D003729 ORTHO05D004384 1.3e-70 270.8 261 61.3
Peaxi162Scf00146g00613 Petunia axillaris HOM05D003729 ORTHO05D004384 2.1e-70 270.0 267 60.3
Duzib106G1244 Durio zibethinus HOM05D003729 ORTHO05D004384 3.6e-70 269.2 272 58.1
Haze_16229 Corylus avellana HOM05D003729 ORTHO05D004384 6.2e-70 268.5 260 60.0
HanXRQChr10g0311271 Helianthus annuus HOM05D003729 ORTHO05D004384 6.2e-70 268.5 257 62.6
COL.COLO4_31341 Corchorus olitorius HOM05D003729 ORTHO05D004384 8.1e-70 268.1 253 60.9
Cfa020012 Carpinus fangiana HOM05D003729 ORTHO05D004384 1.2e-68 264.2 267 58.1
Thecc.05G137800 Theobroma cacao HOM05D003729 ORTHO05D004384 1.2e-68 264.2 263 58.6
MSTRG.19814 Avicennia marina HOM05D003729 ORTHO05D004384 2.0e-68 263.5 255 60.8
arahy.Tifrunner.gnm1.ann1.UC9EW5 Arachis hypogaea HOM05D003729 ORTHO05D004384 7.6e-68 261.5 260 55.4
Lj1g0021267 Lotus japonicus HOM05D003729 ORTHO05D004384 1.3e-67 260.8 265 55.5
Lj6g0002169 Lotus japonicus HOM05D003729 ORTHO05D004384 1.7e-67 260.4 265 55.5
Lalb_Chr06g0173631 Lupinus albus HOM05D003729 ORTHO05D004384 1.7e-67 260.4 263 54.8
PGR031G2313 Punica granatum HOM05D003729 ORTHO05D004384 2.2e-67 260.0 253 59.3
EL10Ac3g07219 Beta vulgaris HOM05D003729 ORTHO05D004384 1.9e-66 256.9 251 59.0
Haze_20214 Corylus avellana HOM05D003729 ORTHO05D004384 3.2e-66 256.1 260 58.1
CsaV3_7G006250 Cucumis sativus L. HOM05D003729 ORTHO05D004384 3.2e-66 256.1 243 58.4
MBI04_g42401_MAGBIO Magnolia biondii HOM05D003729 ORTHO05D004384 4.2e-66 255.8 272 57.4
Ah.04g151040 Amaranthus hybridus HOM05D003729 ORTHO05D004384 5.4e-66 255.4 251 59.0
Haze_20210 Corylus avellana HOM05D003729 ORTHO05D004384 9.3e-66 254.6 260 58.1
CANSAT64G1452 Cannabis sativa HOM05D003729 ORTHO05D004384 1.2e-65 254.2 262 58.0
Potri.016G037400 Populus trichocarpa HOM05D003729 ORTHO05D004384 4.6e-65 252.3 258 57.0
CAN.G1099.5 Capsicum annuum HOM05D003729 ORTHO05D004384 7.9e-65 251.5 258 57.8
Ca_11233_v3 Cicer arietinum L. HOM05D003729 ORTHO05D004384 7.9e-65 251.5 258 54.7
arahy.Tifrunner.gnm1.ann1.HP2N24 Arachis hypogaea HOM05D003729 ORTHO05D004384 1.0e-64 251.1 260 53.5
Sabra16G0039300 Salix brachista HOM05D003729 ORTHO05D004384 1.0e-64 251.1 254 57.9
Sabra16G0044200 Salix brachista HOM05D003729 ORTHO05D004384 3.0e-64 249.6 254 57.5
Prupe.8G004300 Prunus persica HOM05D003729 ORTHO05D004384 1.1e-63 247.7 291 53.3
Sed0006249 Sechium edule HOM05D003729 ORTHO05D004384 1.9e-63 246.9 255 55.3
Medtr2g081080 Medicago truncatula HOM05D003729 ORTHO05D004384 7.4e-63 245.0 250 54.8
Aqoxy3G00221 Aquilegia oxysepala HOM05D003729 ORTHO05D004384 9.6e-63 244.6 256 57.4
Psat5g246840 Pisum sativum HOM05D003729 ORTHO05D004384 1.3e-62 244.2 262 53.1
unitig_27.g24938 Utricularia gibba HOM05D003729 ORTHO05D004384 1.6e-62 243.8 261 56.7
TPR.G32867 Trifolium pratense HOM05D003729 ORTHO05D004384 3.7e-62 242.7 258 52.7
Migut.N03364 Erythranthe guttata HOM05D003729 ORTHO05D004384 1.4e-61 240.7 259 59.5
ECA234G1736 Erigeron canadensis HOM05D003729 ORTHO05D004384 4.0e-61 239.2 261 55.9
ATR0757G154 Amborella trichopoda HOM05D003729 ORTHO05D004384 2.0e-60 236.9 260 54.2
FvH4_2g11640 Fragaria vesca HOM05D003729 ORTHO05D004384 3.4e-60 236.1 263 53.2
FAN24G0230 Fragaria x ananassa HOM05D003729 ORTHO05D004384 3.4e-60 236.1 263 53.2
FAN15G2573 Fragaria x ananassa HOM05D003729 ORTHO05D004384 1.3e-59 234.2 263 52.9
Carub.0005s2373 Capsella rubella HOM05D003729 ORTHO05D004384 9.3e-58 228.0 261 54.4
HPP92_002023 Vanilla planifolia HOM05D003729 ORTHO05D004384 7.9e-57 224.9 269 52.4
THA.LOC104802558 Tarenaya hassleriana HOM05D003729 ORTHO05D004384 1.8e-56 223.8 261 53.3
RcHm_v2.0_Chr6g0270881 Rosa chinensis HOM05D003729 ORTHO05D004384 6.7e-56 221.9 265 52.8
Aa31LG10G11890 Aethionema arabicum HOM05D003729 ORTHO05D004384 1.9e-55 220.3 264 52.3
SGA_v2.0_scaffold149G36565 Striga asiatica HOM05D003729 ORTHO05D004384 3.7e-54 216.1 259 53.7
AUR62003735 Chenopodium quinoa HOM05D003729 ORTHO05D004384 4.8e-54 215.7 237 53.6
AUR62023904 Chenopodium quinoa HOM05D003729 ORTHO05D004384 1.2e-52 211.1 239 52.3
Thhalv10005807m.g Eutrema salsugineum HOM05D003729 ORTHO05D004384 1.2e-52 211.1 260 46.9
CARHR167140 Cardamine hirsuta HOM05D003729 ORTHO05D004384 2.0e-52 210.3 262 50.8
Thecc.05G137500 Theobroma cacao HOM05D003729 ORTHO05D004384 2.0e-52 210.3 231 55.4
AL5G38440 Arabidopsis lyrata HOM05D003729 ORTHO05D004384 7.6e-52 208.4 261 48.7
PSO782G2431 Papaver somniferum HOM05D003729 ORTHO05D004384 1.3e-51 207.6 261 51.3
Sp5g05590 Schrenkiella parvula HOM05D003729 ORTHO05D004384 1.3e-51 207.6 260 48.8
BcaC07g40019 Brassica carinata HOM05D003729 ORTHO05D004384 1.7e-51 207.2 256 50.0
BolC8t50846H Brassica oleracea HOM05D003729 ORTHO05D004384 6.5e-51 205.3 256 49.6
PSO478G2512 Papaver somniferum HOM05D003729 ORTHO05D004384 1.1e-50 204.5 261 50.2
C08p32320 Brassica napus HOM05D003729 ORTHO05D004384 1.9e-50 203.8 256 49.2
A09p49920 Brassica napus HOM05D003729 ORTHO05D004384 1.6e-49 200.7 259 48.6
BraA09t40443Z Brassica rapa HOM05D003729 ORTHO05D004384 1.6e-49 200.7 259 48.6
A07p23200 Brassica napus HOM05D003729 ORTHO05D004384 6.1e-49 198.7 256 50.8
BraA07t29984Z Brassica rapa HOM05D003729 ORTHO05D004384 6.1e-49 198.7 256 50.8
BcaC07g40088 Brassica carinata HOM05D003729 ORTHO05D004384 7.9e-49 198.4 259 48.3
vmacro10990 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 1.0e-48 198.0 229 57.2
BcaC08g44817 Brassica carinata HOM05D003729 ORTHO05D004384 1.9e-47 193.7 259 50.2
BolC6t37563H Brassica oleracea HOM05D003729 ORTHO05D004384 1.9e-47 193.7 259 50.2
C06p24040 Brassica napus HOM05D003729 ORTHO05D004384 4.3e-47 192.6 258 50.0
SEGI_15849 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 7.4e-47 191.8 280 45.7
Atru.chr1.117 Acer truncatum HOM05D003729 ORTHO05D004384 1.7e-43 180.6 206 53.9
Oeu059338.2 Olea europaea HOM05D003729 ORTHO05D004384 1.4e-42 177.6 249 49.0
Zm00001eb373800 Zea mays HOM05D003729 ORTHO05D004384 2.3e-40 170.2 250 44.8
Zm00001eb378550 Zea mays HOM05D003729 ORTHO05D004384 1.5e-39 167.5 250 44.4
SMO334G0073 Selaginella moellendorffii HOM05D003729 ORTHO05D004384 9.7e-39 164.9 253 42.3
AagrBONN_evm.TU.Sc2ySwM_228.5647 Anthoceros agrestis HOM05D003729 ORTHO05D004384 6.9e-37 158.7 264 42.4
Hund24619 Selenicereus undatus HOM05D003729 ORTHO05D004384 6.9e-37 158.7 156 57.1
Ciclev10027979m.g Citrus clementina HOM05D003729 ORTHO05D004384 1.7e-35 154.1 151 60.3
Pp3c18_60 Physcomitrium patens HOM05D003729 ORTHO05D004384 5.0e-35 152.5 307 38.4
Mapoly0009s0077 Marchantia polymorpha HOM05D003729 ORTHO05D004384 3.6e-33 146.4 278 41.0
AUR62016564 Chenopodium quinoa HOM05D003729 ORTHO05D004384 1.2e-28 131.3 240 38.8
SHI51948 Sapria himalayana HOM05D003729 ORTHO05D004384 8.8e-24 115.2 185 45.4
CBR_g12410 Chara braunii HOM05D003729 ORTHO05D004384 1.7e-22 110.9 250 34.4
MCO06G073 Micromonas commoda HOM05D003729 ORTHO05D004384 4.7e-17 92.8 311 33.4
Sc13g0001200 Simmondsia chinensis HOM05D003729 ORTHO05D004384 8.0e-17 92.0 103 56.3
SHI44104 Sapria himalayana HOM05D003729 ORTHO05D004384 2.3e-16 90.5 245 36.7
SHI42965 Sapria himalayana HOM05D003729 ORTHO05D004384 1.4e-13 81.3 127 40.9
SHI50318 Sapria himalayana HOM05D003729 ORTHO05D004384 4.1e-13 79.7 185 35.7
Cre03.g159950 Chlamydomonas reinhardtii HOM05D003729 ORTHO05D004384 2.0e-12 77.4 296 27.4
AT3G56990 Arabidopsis thaliana HOM05D003729 ORTHO05D004384 3.5e-12 76.6 94 47.9
SHI50413 Sapria himalayana HOM05D003729 ORTHO05D004384 4.5e-12 76.3 199 35.2
SHI40171 Sapria himalayana HOM05D003729 ORTHO05D004384 7.7e-12 75.5 71 63.4
Oeu029504.1 Olea europaea HOM05D003729 ORTHO05D004384 1.5e-10 71.2 87 51.7
THA.LOC104802556 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 8.0e-09 65.5 94 44.7
SHI43747 Sapria himalayana HOM05D003729 ORTHO05D004384 2.3e-08 63.9 82 46.3
Sabra06G0025400 Salix brachista HOM05D003729 ORTHO05D004384 5.2e-08 62.8 37 73.0
Gorai.004G004200 Gossypium raimondii HOM05D003729 ORTHO05D004384 7.5e-07 58.9 51 60.8


User provided reference genes

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