Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr25g0285191 Lupinus albus HOM05D004382 ORTHO05D005181 7.2e-69 263.8 138 100.0
Lalb_Chr01g0015971 Lupinus albus HOM05D004382 ORTHO05D005181 1.3e-57 226.5 138 89.9
arahy.Tifrunner.gnm1.ann1.9QX17Y Arachis hypogaea HOM05D004382 ORTHO05D005181 5.0e-54 214.5 141 80.1
Phvul.005G055200 Phaseolus vulgaris HOM05D004382 ORTHO05D005181 8.5e-54 213.8 141 80.9
VMungo1080G1647 Vigna mungo HOM05D004382 ORTHO05D005181 1.5e-53 213.0 141 80.1
arahy.Tifrunner.gnm1.ann1.HCTL36 Arachis hypogaea HOM05D004382 ORTHO05D005181 1.9e-53 212.6 141 79.4
Glyma.08G173700 Glycine max HOM05D004382 ORTHO05D005181 1.2e-52 209.9 141 79.4
TWI38G0625 Tripterygium wilfordii HOM05D004382 ORTHO05D005181 1.2e-52 209.9 142 76.1
Prupe.4G143700 Prunus persica HOM05D004382 ORTHO05D005181 3.6e-52 208.4 141 78.7
AUR62004366 Chenopodium quinoa HOM05D004382 ORTHO05D005181 6.1e-52 207.6 135 77.8
Sabra11G0127600 Salix brachista HOM05D004382 ORTHO05D005181 8.0e-52 207.2 141 78.0
TWI38G0568 Tripterygium wilfordii HOM05D004382 ORTHO05D005181 8.0e-52 207.2 142 75.4
FvH4_3g16050 Fragaria vesca HOM05D004382 ORTHO05D005181 1.8e-51 206.1 141 78.0
FAN11G1612 Fragaria x ananassa HOM05D004382 ORTHO05D005181 1.8e-51 206.1 141 78.0
FAN25G3309 Fragaria x ananassa HOM05D004382 ORTHO05D005181 1.8e-51 206.1 141 78.0
GSVIVG01020484001 Vitis vinifera HOM05D004382 ORTHO05D005181 3.0e-51 205.3 135 78.5
FAN21G1818 Fragaria x ananassa HOM05D004382 ORTHO05D005181 3.9e-51 204.9 141 77.3
Glyma.15G253700 Glycine max HOM05D004382 ORTHO05D005181 3.9e-51 204.9 141 78.7
CsaV3_4G007600 Cucumis sativus L. HOM05D004382 ORTHO05D005181 5.2e-51 204.5 141 77.3
Nitab4.5_0000313g0040 Nicotiana tabacum HOM05D004382 ORTHO05D005181 5.2e-51 204.5 138 74.6
Sed0025739 Sechium edule HOM05D004382 ORTHO05D005181 5.2e-51 204.5 141 76.6
Peaxi162Scf00232g01129 Petunia axillaris HOM05D004382 ORTHO05D005181 6.7e-51 204.1 135 77.8
AUR62022575 Chenopodium quinoa HOM05D004382 ORTHO05D005181 8.8e-51 203.8 135 75.6
CANSAT56G1367 Cannabis sativa HOM05D004382 ORTHO05D005181 1.1e-50 203.4 141 77.3
Nn3g20146 Nelumbo nucifera HOM05D002089 ORTHO05D011346 1.1e-50 203.4 135 79.3
Lj3g0019499 Lotus japonicus HOM05D004382 ORTHO05D005181 1.5e-50 203.0 141 77.3
Potri.001G438700 Populus trichocarpa HOM05D004382 ORTHO05D005181 2.0e-50 202.6 141 78.0
Gohir.A04G050200 Gossypium hirsutum HOM05D004382 ORTHO05D005181 2.6e-50 202.2 138 79.7
ClCG11G016280 Citrullus lanatus HOM05D004382 ORTHO05D005181 4.4e-50 201.4 136 79.4
MD10G1198300 Malus domestica HOM05D004382 ORTHO05D005181 4.4e-50 201.4 133 78.2
SGA_v2.0_scaffold49G18168 Striga asiatica HOM05D004382 ORTHO05D005181 4.4e-50 201.4 135 78.5
Cc05_g15930 Coffea canephora HOM05D004382 ORTHO05D005181 7.4e-50 200.7 135 78.5
Sed0014118 Sechium edule HOM05D004382 ORTHO05D005181 7.4e-50 200.7 141 75.2
COL.COLO4_05073 Corchorus olitorius HOM05D004382 ORTHO05D005181 9.7e-50 200.3 138 78.3
Nitab4.5_0000134g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 9.7e-50 200.3 136 77.2
ClCG07G010700 Citrullus lanatus HOM05D004382 ORTHO05D005181 1.3e-49 199.9 141 75.2
CARHR072720 Cardamine hirsuta HOM05D004382 ORTHO05D005181 1.7e-49 199.5 142 74.6
Gohir.D05G330700 Gossypium hirsutum HOM05D004382 ORTHO05D005181 1.7e-49 199.5 138 79.0
Gorai.009G354500 Gossypium raimondii HOM05D004382 ORTHO05D005181 1.7e-49 199.5 138 79.0
Psat1g002320 Pisum sativum HOM05D004382 ORTHO05D005181 1.7e-49 199.5 141 78.0
Solyc07g066310.3 Solanum lycopersicum HOM05D004382 ORTHO05D005181 1.7e-49 199.5 135 79.3
Sopen07g034490 Solanum pennellii HOM05D004382 ORTHO05D005181 1.7e-49 199.5 135 79.3
PGSC0003DMG400022241 Solanum tuberosum HOM05D004382 ORTHO05D005181 1.7e-49 199.5 135 78.5
Aa31LG4G1950 Aethionema arabicum HOM05D004382 ORTHO05D005181 2.8e-49 198.7 136 77.2
Potri.011G142200 Populus trichocarpa HOM05D004382 ORTHO05D005181 2.8e-49 198.7 141 76.6
RcHm_v2.0_Chr5g0027021 Rosa chinensis HOM05D004382 ORTHO05D005181 2.8e-49 198.7 141 75.2
CiPaw.11G067100 Carya illinoinensis HOM05D004382 ORTHO05D005181 3.7e-49 198.4 141 73.8
Nitab4.5_0002475g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 4.8e-49 198.0 135 74.8
EL10Ac4g08547 Beta vulgaris HOM05D004382 ORTHO05D005181 8.2e-49 197.2 135 76.3
BcaC08g47468 Brassica carinata HOM05D004382 ORTHO05D005181 1.1e-48 196.8 135 74.8
A07p44190 Brassica napus HOM05D004382 ORTHO05D005181 1.1e-48 196.8 135 74.8
C06p52920 Brassica napus HOM05D004382 ORTHO05D005181 1.1e-48 196.8 135 74.8
BolC6t40310H Brassica oleracea HOM05D004382 ORTHO05D005181 1.1e-48 196.8 135 74.8
BraA07t31927Z Brassica rapa HOM05D004382 ORTHO05D005181 1.1e-48 196.8 135 74.8
MD05G1215200 Malus domestica HOM05D004382 ORTHO05D005181 1.4e-48 196.4 136 74.3
Potri.001G438800 Populus trichocarpa HOM05D004382 ORTHO05D005181 1.4e-48 196.4 133 76.7
Ca_03704_v3 Cicer arietinum L. HOM05D004382 ORTHO05D005181 1.8e-48 196.1 141 75.9
Migut.H01700 Erythranthe guttata HOM05D004382 ORTHO05D005181 1.8e-48 196.1 135 76.3
Medtr2g064650 Medicago truncatula HOM05D004382 ORTHO05D005181 1.8e-48 196.1 141 76.6
BcaC03g15860 Brassica carinata HOM05D004382 ORTHO05D005181 2.4e-48 195.7 135 76.3
A02p22470 Brassica napus HOM05D004382 ORTHO05D005181 2.4e-48 195.7 135 76.3
C02p36150 Brassica napus HOM05D004382 ORTHO05D005181 2.4e-48 195.7 135 76.3
BolC2t09629H Brassica oleracea HOM05D004382 ORTHO05D005181 2.4e-48 195.7 135 76.3
BraA02t07252Z Brassica rapa HOM05D004382 ORTHO05D005181 2.4e-48 195.7 135 76.3
Lalb_Chr03g0031561 Lupinus albus HOM05D004382 ORTHO05D005181 2.4e-48 195.7 143 71.3
AT1G79040 Arabidopsis thaliana HOM05D004382 ORTHO05D005181 3.1e-48 195.3 135 74.8
BcaB02g08662 Brassica carinata HOM05D004382 ORTHO05D005181 3.1e-48 195.3 135 74.1
Carub.0002s2591 Capsella rubella HOM05D004382 ORTHO05D005181 4.1e-48 194.9 135 74.8
Sed0016780 Sechium edule HOM05D004382 ORTHO05D005181 4.1e-48 194.9 138 79.7
MSTRG.7052 Avicennia marina HOM05D004382 ORTHO05D005181 5.3e-48 194.5 133 77.4
Oeu002809.1 Olea europaea HOM05D004382 ORTHO05D005181 7.0e-48 194.1 135 74.1
BcaB02g07194 Brassica carinata HOM05D004382 ORTHO05D005181 9.1e-48 193.7 136 75.0
BcaB05g25168 Brassica carinata HOM05D004382 ORTHO05D005181 9.1e-48 193.7 136 75.0
Ciclev10022793m.g Citrus clementina HOM05D004382 ORTHO05D005181 9.1e-48 193.7 138 77.5
Eucgr.F01447 Eucalyptus grandis HOM05D004382 ORTHO05D005181 9.1e-48 193.7 150 71.3
Peaxi162Scf00006g00149 Petunia axillaris HOM05D004382 ORTHO05D005181 9.1e-48 193.7 136 76.5
Sp5g34090 Schrenkiella parvula HOM05D004382 ORTHO05D005181 9.1e-48 193.7 136 74.3
TPR.G10344 Trifolium pratense HOM05D004382 ORTHO05D005181 9.1e-48 193.7 141 74.5
Thhalv10019302m.g Eutrema salsugineum HOM05D004382 ORTHO05D005181 1.6e-47 193.0 136 74.3
Gorai.002G032900 Gossypium raimondii HOM05D004382 ORTHO05D005181 1.6e-47 193.0 138 74.6
A07p27340 Brassica napus HOM05D004382 ORTHO05D005181 2.0e-47 192.6 136 74.3
BraA07t30375Z Brassica rapa HOM05D004382 ORTHO05D005181 2.0e-47 192.6 136 74.3
PGR142G2616 Punica granatum HOM05D004382 ORTHO05D005181 2.6e-47 192.2 135 74.1
QL04p074767 Quercus lobata HOM05D004382 ORTHO05D005181 2.6e-47 192.2 140 74.3
unitig_8.g4771 Utricularia gibba HOM05D004382 ORTHO05D005181 2.6e-47 192.2 135 74.8
Aqoxy1G01569 Aquilegia oxysepala HOM05D004382 ORTHO05D005181 3.5e-47 191.8 141 70.9
C06p30200 Brassica napus HOM05D004382 ORTHO05D005181 4.5e-47 191.4 136 74.3
BolC6t38183H Brassica oleracea HOM05D004382 ORTHO05D005181 4.5e-47 191.4 136 74.3
BcaC08g45389 Brassica carinata HOM05D004382 ORTHO05D005181 5.9e-47 191.0 136 74.3
Ah.08g216320 Amaranthus hybridus HOM05D004382 ORTHO05D005181 7.7e-47 190.7 135 74.8
CSS0016237 Camellia sinensis var. sinensis HOM05D004382 ORTHO05D005181 7.7e-47 190.7 131 74.8
Oeu003841.1 Olea europaea HOM05D004382 ORTHO05D005181 7.7e-47 190.7 142 73.2
CSS0001445 Camellia sinensis var. sinensis HOM05D004382 ORTHO05D005181 1.0e-46 190.3 135 74.8
CAN.G943.25 Capsicum annuum HOM05D004382 ORTHO05D005181 2.2e-46 189.1 135 75.6
Actinidia37109 Actinidia chinensis HOM05D004382 ORTHO05D005181 2.9e-46 188.7 136 72.8
DCAR_013749 Daucus carota HOM05D004382 ORTHO05D005181 2.9e-46 188.7 142 73.2
SalBow8G0430 Salvia bowleyana HOM05D004382 ORTHO05D005181 2.9e-46 188.7 141 73.0
PSO541G3267 Papaver somniferum HOM05D004382 ORTHO05D005181 5.0e-46 188.0 136 72.1
PSO675G7775 Papaver somniferum HOM05D004382 ORTHO05D005181 5.0e-46 188.0 136 72.1
Nitab4.5_0001791g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 6.5e-46 187.6 137 74.5
THA.LOC104812349 Tarenaya hassleriana HOM05D004382 ORTHO05D005181 6.5e-46 187.6 121 80.2
Gohir.A01G037100 Gossypium hirsutum HOM05D004382 ORTHO05D005181 8.5e-46 187.2 138 72.5
Thecc.07G156900 Theobroma cacao HOM05D004382 ORTHO05D005181 1.5e-45 186.4 138 75.4
Sc16g0003480 Simmondsia chinensis HOM05D004382 ORTHO05D005181 2.5e-45 185.7 132 72.0
ECA236G0888 Erigeron canadensis HOM05D004382 ORTHO05D005181 5.5e-45 184.5 141 70.9
Hma1.2p1_0193F.1_g084500 Hydrangea macrophylla HOM05D004382 ORTHO05D005181 5.5e-45 184.5 136 72.1
MBI02_g25371_MAGBIO Magnolia biondii HOM05D004382 ORTHO05D005181 7.2e-45 184.1 142 71.1
SalBow5G1313 Salvia bowleyana HOM05D004382 ORTHO05D005181 1.2e-44 183.3 135 71.1
SalBow5G2519 Salvia bowleyana HOM05D004382 ORTHO05D005181 1.2e-44 183.3 135 71.1
Manes.15G102500 Manihot esculenta HOM05D004382 ORTHO05D005181 1.6e-44 183.0 142 71.8
Potri.011G142300 Populus trichocarpa HOM05D004382 ORTHO05D005181 1.6e-44 183.0 138 72.5
AL2G39500 Arabidopsis lyrata HOM05D004382 ORTHO05D005181 2.7e-44 182.2 127 73.2
Hma1.2p1_0321F.1_g124500 Hydrangea macrophylla HOM05D004382 ORTHO05D005181 1.8e-43 179.5 135 70.4
Rhsim04G0006200 Rhododendron simsii HOM05D004382 ORTHO05D005181 2.3e-43 179.1 135 71.1
ATR1098G153 Amborella trichopoda HOM05D004382 ORTHO05D005181 3.0e-43 178.7 138 71.7
DCAR_016816 Daucus carota HOM05D004382 ORTHO05D005181 3.0e-43 178.7 133 73.7
vmacro09788 Vaccinium macrocarpon HOM05D004382 ORTHO05D005181 3.0e-43 178.7 138 71.0
Atru.chr2.1854 Acer truncatum HOM05D004382 ORTHO05D005181 4.0e-43 178.3 138 72.5
Duzib187G1376 Durio zibethinus HOM05D004382 ORTHO05D005181 4.0e-43 178.3 138 72.5
Os08g0200300 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 4.0e-43 178.3 136 69.9
MSTRG.14535 Avicennia marina HOM05D004382 ORTHO05D005181 2.0e-42 176.0 136 71.3
HanXRQChr05g0160651 Helianthus annuus HOM05D004382 ORTHO05D005181 2.6e-42 175.6 135 68.9
Solyc12g017250.2 Solanum lycopersicum HOM05D004382 ORTHO05D005181 3.4e-42 175.3 139 69.1
CDE04G0985 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 4.4e-42 174.9 141 69.5
Sopen12g008070 Solanum pennellii HOM05D004382 ORTHO05D005181 5.7e-42 174.5 139 69.8
CDE12G0390 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 7.5e-42 174.1 141 68.8
HanXRQChr08g0232801 Helianthus annuus HOM05D004382 ORTHO05D005181 1.3e-41 173.3 135 68.1
TAR627G0744 Trochodendron aralioides HOM05D004382 ORTHO05D005181 1.3e-41 173.3 135 68.9
DCAR_009633 Daucus carota HOM05D004382 ORTHO05D005181 2.2e-41 172.6 141 65.2
Hund10309 Selenicereus undatus HOM05D004382 ORTHO05D005181 2.8e-41 172.2 125 69.6
HPP92_016563 Vanilla planifolia HOM05D004382 ORTHO05D005181 3.1e-40 168.7 138 65.9
CDE11G0376 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 5.4e-40 167.9 143 65.7
Manes.03G082900 Manihot esculenta HOM05D004382 ORTHO05D005181 7.0e-40 167.5 142 69.0
Eucgr.F03186 Eucalyptus grandis HOM05D004382 ORTHO05D005181 3.5e-39 165.2 110 75.5
Lsat_1_v5_gn_7_116120 Lactuca sativa HOM05D004382 ORTHO05D005181 1.3e-38 163.3 136 64.7
Zm00001eb171230 Zea mays HOM05D004382 ORTHO05D005181 1.3e-38 163.3 136 65.4
Sabra11G0127700 Salix brachista HOM05D004382 ORTHO05D005181 6.5e-38 161.0 136 65.4
Os07g0147550 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 1.5e-37 159.8 138 63.0
Sabra16G0296700 Salix brachista HOM05D004382 ORTHO05D005181 9.4e-37 157.1 157 61.8
vmacro11652 Vaccinium macrocarpon HOM05D004382 ORTHO05D005181 9.4e-37 157.1 146 63.0
Os07g0147500 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 5.2e-35 151.4 139 59.7
Rhsim06G0237200 Rhododendron simsii HOM05D006828 ORTHO05D008312 9.8e-34 147.1 91 80.2
Dinv19628 Davidia involucrata HOM05D006828 ORTHO05D008312 1.7e-33 146.4 88 81.8
SEGI_14655 Sequoiadendron giganteum HOM05D004382 ORTHO05D005181 1.7e-33 146.4 132 57.6
Mapoly0001s0109 Marchantia polymorpha HOM05D004382 ORTHO05D005181 2.2e-33 146.0 147 58.5
Gohir.D01G024400 Gossypium hirsutum HOM05D004382 ORTHO05D005181 2.4e-32 142.5 107 69.2
AagrBONN_evm.TU.Sc2ySwM_228.2640 Anthoceros agrestis HOM05D004382 ORTHO05D005181 2.0e-31 139.4 146 55.5
SMO134G0197 Selaginella moellendorffii HOM05D004382 ORTHO05D005181 2.0e-31 139.4 124 58.1
Mapoly0006s0055 Marchantia polymorpha HOM05D004382 ORTHO05D005181 2.7e-31 139.0 141 57.4
MBI18_g37150_MAGBIO Magnolia biondii HOM05D004382 ORTHO05D005181 6.6e-30 134.4 135 58.5
Pp3c27_2340 Physcomitrium patens HOM05D004382 ORTHO05D005181 1.1e-29 133.7 131 56.5
Pp3c5_4230 Physcomitrium patens HOM05D004382 ORTHO05D005181 9.5e-29 130.6 126 57.9
PGSC0003DMG400002312 Solanum tuberosum HOM05D004382 ORTHO05D005181 1.2e-28 130.2 139 59.7
Pp3c16_5650 Physcomitrium patens HOM05D004382 ORTHO05D005181 2.1e-28 129.4 145 52.4
Pp3c27_2320 Physcomitrium patens HOM05D004382 ORTHO05D005181 1.8e-27 126.3 132 58.3
MELO3C016181.2 Cucumis melo HOM05D004382 ORTHO05D005181 6.8e-27 124.4 91 73.6
Cpa.g.c37194 Carica papaya HOM05D004382 ORTHO05D005181 1.4e-24 116.7 83 73.5
PGR083G0343 Punica granatum HOM05D004382 ORTHO05D005181 5.0e-22 108.2 87 67.8
CBR_g30109 Chara braunii HOM05D000004 ORTHO05D000002 2.5e-21 105.9 66 74.2
PRCOL_00003342 Prasinoderma coloniale HOM05D004382 ORTHO05D005181 1.2e-20 103.6 138 44.2
Cpa.g.c38697 Carica papaya HOM05D004382 ORTHO05D005181 6.8e-19 97.8 53 84.9
Cre06.g261000 Chlamydomonas reinhardtii HOM05D004382 ORTHO05D005181 2.9e-17 92.4 139 43.2
Atru.chr6.732 Acer truncatum HOM05D004382 ORTHO05D005181 1.7e-14 83.2 77 64.9
Haze_08525 Corylus avellana HOM05D004382 ORTHO05D005181 3.0e-14 82.4 50 80.0
TAR626G0945 Trochodendron aralioides HOM05D004382 ORTHO05D005181 4.4e-10 68.6 67 59.7
TPR.G25891 Trifolium pratense HOM05D004382 ORTHO05D005181 5.1e-06 55.1 133 37.6


User provided reference genes

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