Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0396361 Lupinus albus HOM05D006300 ORTHO05D007623 2.6e-181 638.6 334 100.0
arahy.Tifrunner.gnm1.ann1.F4I7X2 Arachis hypogaea HOM05D006300 ORTHO05D007623 2.0e-93 346.7 323 63.5
arahy.Tifrunner.gnm1.ann1.X9C73S Arachis hypogaea HOM05D006300 ORTHO05D007623 2.9e-92 342.8 323 62.8
Medtr2g100100 Medicago truncatula HOM05D006300 ORTHO05D007623 1.1e-86 324.3 312 61.9
TPR.G6530 Trifolium pratense HOM05D006300 ORTHO05D007623 6.4e-79 298.5 293 61.1
Glyma.15G023900 Glycine max HOM05D006300 ORTHO05D007623 5.6e-75 285.4 180 80.0
Phvul.005G159900 Phaseolus vulgaris HOM05D006300 ORTHO05D007623 8.0e-74 281.6 185 77.3
Lj3g0013508 Lotus japonicus HOM05D006300 ORTHO05D007623 2.6e-72 276.6 283 60.4
Glyma.13G350600 Glycine max HOM05D006300 ORTHO05D007623 7.5e-72 275.0 185 77.8
CiPaw.01G225300 Carya illinoinensis HOM05D006300 ORTHO05D007623 3.7e-71 272.7 276 63.4
Dinv30382 Davidia involucrata HOM05D006300 ORTHO05D007623 1.1e-70 271.2 319 55.5
VMungo1080G1020 Vigna mungo HOM05D006300 ORTHO05D007623 4.1e-70 269.2 215 67.0
CANSAT56G1450 Cannabis sativa HOM05D006300 ORTHO05D007623 5.4e-70 268.9 289 57.4
Duzib192G0510 Durio zibethinus HOM05D006300 ORTHO05D007623 5.4e-70 268.9 281 58.7
QL05p012743 Quercus lobata HOM05D006300 ORTHO05D007623 2.0e-69 266.9 317 54.9
Actinidia21757 Actinidia chinensis HOM05D006300 ORTHO05D007623 6.0e-69 265.4 307 54.7
CsaV3_7G034830 Cucumis sativus L. HOM05D006300 ORTHO05D007623 1.1e-67 261.2 306 54.9
CiPaw.02G140400 Carya illinoinensis HOM05D006300 ORTHO05D007623 1.5e-67 260.8 288 57.6
Gohir.D03G056300 Gossypium hirsutum HOM05D006300 ORTHO05D007623 1.5e-67 260.8 325 52.0
Manes.11G026800 Manihot esculenta HOM05D006300 ORTHO05D007623 3.3e-67 259.6 335 50.7
Gorai.003G059300 Gossypium raimondii HOM05D006300 ORTHO05D007623 4.3e-67 259.2 325 51.7
GSVIVG01016850001 Vitis vinifera HOM05D006300 ORTHO05D007623 4.3e-67 259.2 262 60.3
Thecc.06G111200 Theobroma cacao HOM05D006300 ORTHO05D007623 9.5e-67 258.1 281 56.2
Psat4g199680 Pisum sativum HOM05D006300 ORTHO05D007623 1.6e-66 257.3 181 75.1
Manes.04G139300 Manihot esculenta HOM05D006300 ORTHO05D007623 3.6e-66 256.1 327 51.7
COL.COLO4_30656 Corchorus olitorius HOM05D006300 ORTHO05D007623 4.7e-66 255.8 282 56.0
Duzib160G0060 Durio zibethinus HOM05D006300 ORTHO05D007623 6.2e-66 255.4 301 53.5
MD17G1174400 Malus domestica HOM05D006300 ORTHO05D007623 1.8e-65 253.8 336 50.0
MELO3C024394.2 Cucumis melo HOM05D006300 ORTHO05D007623 5.2e-65 252.3 339 51.6
Gohir.A10G059500 Gossypium hirsutum HOM05D006300 ORTHO05D007623 2.0e-64 250.4 304 50.3
Gohir.A02G115200 Gossypium hirsutum HOM05D006300 ORTHO05D007623 2.6e-64 250.0 334 48.8
Duzib235G0903 Durio zibethinus HOM05D006300 ORTHO05D007623 3.4e-64 249.6 277 55.2
Gohir.D10G061000 Gossypium hirsutum HOM05D006300 ORTHO05D007623 3.4e-64 249.6 353 47.3
Rhsim08G0233100 Rhododendron simsii HOM05D006300 ORTHO05D007623 7.5e-64 248.4 245 60.4
Haze_15947 Corylus avellana HOM05D006300 ORTHO05D007623 9.8e-64 248.1 298 55.4
Prupe.3G050100 Prunus persica HOM05D006300 ORTHO05D007623 1.3e-63 247.7 324 51.5
Solyc03g121560.3 Solanum lycopersicum HOM05D006300 ORTHO05D007623 2.2e-63 246.9 264 56.1
Sopen03g040370 Solanum pennellii HOM05D006300 ORTHO05D007623 4.9e-63 245.7 316 52.2
Gorai.011G065200 Gossypium raimondii HOM05D006300 ORTHO05D007623 1.9e-62 243.8 283 52.7
THA.LOC104812213 Tarenaya hassleriana HOM05D006300 ORTHO05D007623 1.9e-62 243.8 321 51.7
Dinv37916 Davidia involucrata HOM05D006300 ORTHO05D007623 9.2e-62 241.5 249 59.4
Ah.15g094170 Amaranthus hybridus HOM05D006300 ORTHO05D007623 3.9e-60 236.1 307 51.5
Potri.003G038600 Populus trichocarpa HOM05D006300 ORTHO05D007623 1.1e-59 234.6 341 48.4
CAN.G1389.16 Capsicum annuum HOM05D006300 ORTHO05D007623 1.5e-59 234.2 322 50.3
Medtr8g016260 Medicago truncatula HOM05D006300 ORTHO05D007623 4.3e-59 232.6 297 50.5
TAR383G0464 Trochodendron aralioides HOM05D006300 ORTHO05D007623 2.8e-58 229.9 169 72.2
TAR636G0696 Trochodendron aralioides HOM05D006300 ORTHO05D007623 4.7e-58 229.2 294 51.0
Carub.0001s1740 Capsella rubella HOM05D006300 ORTHO05D007623 1.1e-57 228.0 168 71.4
HanXRQChr09g0276431 Helianthus annuus HOM05D006300 ORTHO05D007623 1.1e-57 228.0 171 72.5
vmacro18787 Vaccinium macrocarpon HOM05D006300 ORTHO05D007623 1.1e-57 228.0 289 51.6
BcaB07g34023 Brassica carinata HOM05D006300 ORTHO05D007623 3.1e-57 226.5 170 70.0
BcaC05g25688 Brassica carinata HOM05D006300 ORTHO05D007623 3.1e-57 226.5 170 69.4
C05p16080 Brassica napus HOM05D006300 ORTHO05D007623 3.1e-57 226.5 170 69.4
BolC5t30308H Brassica oleracea HOM05D006300 ORTHO05D007623 3.1e-57 226.5 170 69.4
DCAR_007620 Daucus carota HOM05D006300 ORTHO05D007623 4.0e-57 226.1 221 60.2
Thhalv10008108m.g Eutrema salsugineum HOM05D006300 ORTHO05D007623 4.0e-57 226.1 168 69.6
Lsat_1_v5_gn_4_95241 Lactuca sativa HOM05D006300 ORTHO05D007623 5.2e-57 225.7 320 50.3
AT1G17665 Arabidopsis thaliana HOM05D006300 ORTHO05D007623 8.9e-57 224.9 255 54.1
Migut.I01022 Erythranthe guttata HOM05D006300 ORTHO05D007623 8.9e-57 224.9 308 47.7
FvH4_6g33270 Fragaria vesca HOM05D006300 ORTHO05D007623 2.6e-56 223.4 192 66.1
FAN14G0371 Fragaria x ananassa HOM05D006300 ORTHO05D007623 2.6e-56 223.4 192 66.1
Cc04_g01980 Coffea canephora HOM05D006300 ORTHO05D007623 3.4e-56 223.0 169 68.0
MBI04_g34125_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 3.4e-56 223.0 342 47.7
AL1G29990 Arabidopsis lyrata HOM05D006300 ORTHO05D007623 4.4e-56 222.6 296 50.0
PGR102G2043 Punica granatum HOM05D006300 ORTHO05D007623 4.4e-56 222.6 207 62.8
RcHm_v2.0_Chr2g0142971 Rosa chinensis HOM05D006300 ORTHO05D007623 7.6e-56 221.9 205 62.4
Sabra03G0025100 Salix brachista HOM05D006300 ORTHO05D007623 9.9e-56 221.5 355 45.4
Nn6g35476 Nelumbo nucifera HOM05D006300 ORTHO05D007623 1.7e-55 220.7 333 45.3
MBI01_g01269_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 3.8e-55 219.5 169 71.0
TAR624G0799 Trochodendron aralioides HOM05D006300 ORTHO05D007623 3.8e-55 219.5 368 46.5
CARHR018270 Cardamine hirsuta HOM05D006300 ORTHO05D007623 4.9e-55 219.2 339 46.9
Aqoxy7G01215 Aquilegia oxysepala HOM05D006300 ORTHO05D007623 8.4e-55 218.4 188 64.4
Nn8g38867 Nelumbo nucifera HOM05D006300 ORTHO05D007623 1.1e-54 218.0 168 70.8
PGR102G2710 Punica granatum HOM05D006300 ORTHO05D007623 2.7e-53 213.4 194 62.9
Sp1g15770 Schrenkiella parvula HOM05D006300 ORTHO05D007623 3.5e-53 213.0 306 47.4
MSTRG.10986 Avicennia marina HOM05D006300 ORTHO05D007623 3.0e-52 209.9 309 45.6
FAN05G1138 Fragaria x ananassa HOM05D006300 ORTHO05D007623 3.0e-52 209.9 182 65.4
FAN02G1261 Fragaria x ananassa HOM05D006300 ORTHO05D007623 8.6e-52 208.4 208 60.6
BraA06t24508Z Brassica rapa HOM05D006300 ORTHO05D007623 1.9e-51 207.2 291 49.1
Ca_28052_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 1.9e-51 207.2 184 63.0
Ca_30533_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 1.9e-51 207.2 184 63.0
Nitab4.5_0001295g0030 Nicotiana tabacum HOM05D006300 ORTHO05D007623 1.9e-51 207.2 330 48.2
SalBow6G0902 Salvia bowleyana HOM05D006300 ORTHO05D007623 2.5e-51 206.8 305 46.2
Aa31LG7G2500 Aethionema arabicum HOM05D006300 ORTHO05D007623 3.3e-51 206.5 159 68.6
PSO210G2046 Papaver somniferum HOM05D006300 ORTHO05D007623 4.3e-51 206.1 180 63.3
Peaxi162Scf00038g01529 Petunia axillaris HOM05D006300 ORTHO05D007623 8.1e-50 201.8 222 56.8
ECA232G1041 Erigeron canadensis HOM05D000140 ORTHO05D000087 1.1e-49 201.4 166 66.9
PSO210G0359 Papaver somniferum HOM05D006300 ORTHO05D007623 1.4e-49 201.1 231 54.1
A06p13560 Brassica napus HOM05D006300 ORTHO05D007623 3.1e-49 199.9 297 47.8
Hund20857 Selenicereus undatus HOM05D006300 ORTHO05D007623 5.2e-49 199.1 364 41.2
AUR62038132 Chenopodium quinoa HOM05D000073 ORTHO05D000033 8.9e-49 198.4 157 66.9
ClCG09G000650 Citrullus lanatus HOM05D006300 ORTHO05D007623 4.4e-48 196.1 289 48.1
Ciclev10025783m.g Citrus clementina HOM05D006300 ORTHO05D007623 4.4e-48 196.1 317 44.2
CDE04G2687 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 9.9e-48 194.9 207 57.5
CDE06G2767 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 3.8e-47 193.0 327 43.1
SGA_v2.0_scaffold127G34049 Striga asiatica HOM05D006300 ORTHO05D007623 7.1e-46 188.7 238 50.0
Nitab4.5_0007429g0010 Nicotiana tabacum HOM05D006300 ORTHO05D007623 3.3e-43 179.9 283 47.0
Mapoly0001s0383 Marchantia polymorpha HOM05D006300 ORTHO05D007623 2.8e-42 176.8 207 53.1
AagrBONN_evm.TU.Sc2ySwM_228.500 Anthoceros agrestis HOM05D006300 ORTHO05D007623 4.8e-42 176.0 166 58.4
TPR.G7922 Trifolium pratense HOM05D006300 ORTHO05D007623 1.1e-41 174.9 116 76.7
Atru.chr1.3720 Acer truncatum HOM05D001008 ORTHO05D003146 7.6e-40 168.7 281 42.3
FAN09G0301 Fragaria x ananassa HOM05D006300 ORTHO05D007623 9.9e-40 168.3 186 57.0
Pp3c7_7340 Physcomitrium patens HOM05D006300 ORTHO05D007623 4.9e-39 166.0 169 56.2
ATR0026G017 Amborella trichopoda HOM05D006300 ORTHO05D007623 8.4e-39 165.2 175 53.7
Oeu039964.1 Olea europaea HOM05D006300 ORTHO05D007623 4.6e-37 159.5 124 66.9
Cpa.g.sc25.55 Carica papaya HOM05D006300 ORTHO05D007623 5.8e-32 142.5 104 76.0
PGSC0003DMG400002589 Solanum tuberosum HOM05D006300 ORTHO05D007623 9.9e-32 141.7 194 46.9
arahy.Tifrunner.gnm1.ann1.046NH9 Arachis hypogaea HOM05D006300 ORTHO05D007623 1.3e-31 141.4 139 59.7
HPP92_003967 Vanilla planifolia HOM05D006300 ORTHO05D007623 2.7e-29 133.7 123 61.0
arahy.Tifrunner.gnm1.ann1.Z85M5C Arachis hypogaea HOM05D006300 ORTHO05D007623 6.0e-29 132.5 105 65.7
Os01g0197400 Oryza sativa ssp. japonica HOM05D006300 ORTHO05D007623 5.8e-24 115.9 165 41.2
Zm00001eb337890 Zea mays HOM05D006300 ORTHO05D007623 3.8e-23 113.2 169 39.6
COL.COLO4_30657 Corchorus olitorius HOM05D001008 ORTHO05D007623 1.6e-21 107.8 71 81.7
arahy.Tifrunner.gnm1.ann1.RJ4DBV Arachis hypogaea HOM05D006300 ORTHO05D007623 3.5e-21 106.7 72 75.0
arahy.Tifrunner.gnm1.ann1.IE7N3Z Arachis hypogaea HOM05D006300 ORTHO05D007623 9.6e-19 98.6 136 46.3
CSS0024626 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 1.3e-18 98.2 62 79.0
arahy.Tifrunner.gnm1.ann1.GTSR33 Arachis hypogaea HOM05D006300 ORTHO05D007623 1.9e-14 84.3 94 52.1
Cpa.g.sc25.56 Carica papaya HOM05D006300 ORTHO05D007623 1.2e-13 81.6 136 40.4
arahy.Tifrunner.gnm1.ann1.24L57E Arachis hypogaea HOM05D006300 ORTHO05D007623 7.9e-13 79.0 75 61.3
Sed0006903 Sechium edule HOM05D006300 ORTHO05D007623 5.7e-11 72.8 220 31.8
Sc15g0000130 Simmondsia chinensis HOM05D006300 ORTHO05D007623 4.8e-10 69.7 148 36.5
CSS0019345 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 5.3e-09 66.2 207 35.7
Lj9P518T56 Lonicera japonica HOM05D006300 ORTHO05D007623 9.1e-09 65.5 154 35.1
TPR.G8429 Trifolium pratense HOM05D006300 ORTHO05D007623 7.7e-08 62.4 180 37.2
MBI06_g20962_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 1.1e-06 58.5 40 75.0
MBI07_g16251_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 1.1e-06 58.5 126 36.5
MBI09_g03017_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 1.9e-06 57.8 49 67.3


User provided reference genes

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