Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr23g0274271 Lupinus albus HOM05D002578 ORTHO05D005154 3.1e-36 154.5 69 100.0
Lalb_Chr25g0282891 Lupinus albus HOM05D002578 ORTHO05D005154 1.2e-16 89.4 49 85.7
LjContig00318g0021445 Lotus japonicus HOM05D002578 ORTHO05D005154 7.8e-16 86.7 49 81.6
LjContig00319g0008344 Lotus japonicus HOM05D002578 ORTHO05D005154 7.8e-16 86.7 49 81.6
LjContig00319g0015839 Lotus japonicus HOM05D002578 ORTHO05D005154 7.8e-16 86.7 49 81.6
arahy.Tifrunner.gnm1.ann1.I6CLRS Arachis hypogaea HOM05D002578 ORTHO05D005154 3.0e-15 84.7 48 85.4
arahy.Tifrunner.gnm1.ann1.ID3W56 Arachis hypogaea HOM05D002578 ORTHO05D005154 3.0e-15 84.7 48 85.4
arahy.Tifrunner.gnm1.ann1.R0YUWC Arachis hypogaea HOM05D002578 ORTHO05D005154 3.0e-15 84.7 48 85.4
arahy.Tifrunner.gnm1.ann1.YJ6L74 Arachis hypogaea HOM05D002578 ORTHO05D005154 3.0e-15 84.7 48 85.4
Gohir.1Z049834 Gossypium hirsutum HOM05D002578 ORTHO05D005154 3.3e-14 81.3 49 77.6
Gohir.A12G024500 Gossypium hirsutum HOM05D002578 ORTHO05D005154 3.3e-14 81.3 49 77.6
Gohir.D11G067600 Gossypium hirsutum HOM05D002578 ORTHO05D005154 3.3e-14 81.3 49 77.6
Medtr0002s0790 Medicago truncatula HOM05D002578 ORTHO05D005154 4.3e-14 80.9 49 77.6
Medtr4g051410 Medicago truncatula HOM05D002578 ORTHO05D005154 4.3e-14 80.9 53 69.8
PGSC0003DMG400003499 Solanum tuberosum HOM05D002578 ORTHO05D005154 4.3e-14 80.9 49 75.5
ATCG00800 Arabidopsis thaliana HOM05D002578 ORTHO05D005154 7.3e-14 80.1 49 75.5
PGR111G0034 Punica granatum HOM05D002578 ORTHO05D005154 7.3e-14 80.1 49 75.5
TAR375G1061 Trochodendron aralioides HOM05D002578 ORTHO05D005154 7.3e-14 80.1 49 75.5
Gohir.D06G105066 Gossypium hirsutum HOM05D002578 ORTHO05D005154 9.6e-14 79.7 49 75.5
BNapus_Darmor_BZH_scaffold_253p00370 Brassica napus HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 73.5
C03p38130 Brassica napus HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 73.5
BolSC29t60532H Brassica oleracea HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 73.5
BolSC35t60726H Brassica oleracea HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 73.5
BolSC56t61245H Brassica oleracea HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 73.5
BraA06t25386Z Brassica rapa HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 73.5
BraSC103t45443Z Brassica rapa HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 73.5
BraSC103t45487Z Brassica rapa HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 73.5
BraSC138t45551Z Brassica rapa HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 73.5
BraSC59t46568Z Brassica rapa HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 73.5
CARHR282270 Cardamine hirsuta HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 73.5
Duzib026G0002 Durio zibethinus HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 77.6
Duzib086G0007 Durio zibethinus HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 77.6
Duzib125G0004 Durio zibethinus HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 77.6
Duzib256G0002 Durio zibethinus HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 77.6
Zm00001eb039190 Zea mays HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 75.5
Zm00001eb097380 Zea mays HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 75.5
Zm00001eb115040 Zea mays HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 75.5
Zm00001eb434870 Zea mays HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 75.5
Zm00001eb435100 Zea mays HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 75.5
Zm00001eb435640 Zea mays HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 75.5
Zm00001eb437960 Zea mays HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 75.5
Zm00001eb439940 Zea mays HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 75.5
Zm00001eb439960 Zea mays HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 75.5
Zm00001eb440780 Zea mays HOM05D002578 ORTHO05D005154 1.3e-13 79.3 49 75.5
Medtr8g038470 Medicago truncatula HOM05D002578 ORTHO05D005154 1.6e-13 79.0 53 67.9
PSO548G0101 Papaver somniferum HOM05D002578 ORTHO05D005154 2.1e-13 78.6 49 73.5
CAN.G134.2 Capsicum annuum HOM05D002578 ORTHO05D005154 3.6e-13 77.8 49 71.4
CAN.G424.95 Capsicum annuum HOM05D002578 ORTHO05D005154 3.6e-13 77.8 49 71.4
Hma1.2p1_0104F.1_g050140 Hydrangea macrophylla HOM05D002578 ORTHO05D005154 3.6e-13 77.8 49 73.5
Hma1.2p1_0298F.1_g117740 Hydrangea macrophylla HOM05D002578 ORTHO05D005154 3.6e-13 77.8 49 73.5
Hma1.2p1_0818F.1_g223306 Hydrangea macrophylla HOM05D002578 ORTHO05D005154 3.6e-13 77.8 49 73.5
Thhalv10010706m.g Eutrema salsugineum HOM05D002578 ORTHO05D005154 6.2e-13 77.0 49 73.5
Cpa.g.sc0.194 Carica papaya HOM05D002578 ORTHO05D005154 8.1e-13 76.6 49 75.5
DCAR_032524 Daucus carota HOM05D002578 ORTHO05D005154 1.1e-12 76.3 49 73.5
Migut.D01327 Erythranthe guttata HOM05D002578 ORTHO05D005154 2.4e-12 75.1 49 73.5
Nitab4.5_0004430g0040 Nicotiana tabacum HOM05D002578 ORTHO05D005154 2.4e-12 75.1 49 69.4
Gohir.A08G071000 Gossypium hirsutum HOM05D002578 ORTHO05D005154 3.1e-12 74.7 49 73.5
Sed0023475 Sechium edule HOM05D002578 ORTHO05D005154 3.1e-12 74.7 54 63.0
CSS0047935 Camellia sinensis var. sinensis HOM05D002578 ORTHO05D005154 6.9e-12 73.6 54 64.8
HanXRQChr00c0557g0575711 Helianthus annuus HOM05D002578 ORTHO05D005154 6.9e-12 73.6 49 69.4
HanXRQChr16g0526141 Helianthus annuus HOM05D002578 ORTHO05D005154 6.9e-12 73.6 49 69.4
Oeu062830.1 Olea europaea HOM05D002578 ORTHO05D005154 6.9e-12 73.6 56 66.1
SalBow1G1132 Salvia bowleyana HOM05D002578 ORTHO05D005154 9.0e-12 73.2 49 71.4
HanXRQChr14g0432301 Helianthus annuus HOM05D002578 ORTHO05D005154 2.6e-11 71.6 49 67.3
BraSC58t46504Z Brassica rapa HOM05D002578 ORTHO05D005154 4.5e-11 70.9 51 66.7
CAN.G127.12 Capsicum annuum HOM05D002578 ORTHO05D005154 4.5e-11 70.9 49 65.3
Eucgr.C03015 Eucalyptus grandis HOM05D002578 ORTHO05D005154 4.5e-11 70.9 49 65.3
Potri.012G047500 Populus trichocarpa HOM05D002578 ORTHO05D005154 4.5e-11 70.9 49 67.3
Gorai.010G148900 Gossypium raimondii HOM05D002578 ORTHO05D005154 7.6e-11 70.1 49 69.4
Hund08206 Selenicereus undatus HOM05D002578 ORTHO05D005154 9.9e-11 69.7 49 67.3
Hund29530 Selenicereus undatus HOM05D002578 ORTHO05D005154 9.9e-11 69.7 49 67.3
Hund30213 Selenicereus undatus HOM05D002578 ORTHO05D005154 9.9e-11 69.7 49 67.3
HanXRQChr11g0321141 Helianthus annuus HOM05D002578 ORTHO05D002698 1.3e-10 69.3 48 66.7
arahy.Tifrunner.gnm1.ann1.HB4K1E Arachis hypogaea HOM05D002578 ORTHO05D005154 3.8e-10 67.8 38 84.2
Hund29503 Selenicereus undatus HOM05D002578 ORTHO05D005154 4.9e-10 67.4 48 68.8
Psat4g046880 Pisum sativum HOM05D002578 ORTHO05D005154 1.1e-09 66.2 47 66.0
Lsat_1_v5_gn_5_50461 Lactuca sativa HOM05D002578 ORTHO05D005154 2.7e-08 61.6 49 59.2
Ah.10g027440 Amaranthus hybridus HOM05D002578 ORTHO05D005154 3.5e-08 61.2 40 70.0
Solyc00g500034.1 Solanum lycopersicum HOM05D002578 ORTHO05D005154 3.5e-08 61.2 38 73.7
Nitab4.5_0013360g0010 Nicotiana tabacum HOM05D002578 ORTHO05D005154 1.1e-06 56.2 38 65.8
Gorai.001G190500 Gossypium raimondii HOM05D002578 ORTHO05D002698 3.3e-06 54.7 37 70.3
Solyc12g035880.1 Solanum lycopersicum HOM05D002578 ORTHO05D005154 5.6e-06 53.9 36 66.7
CAN.G1078.3 Capsicum annuum HOM05D002578 ORTHO05D005154 7.4e-06 53.5 36 63.9
HanXRQChr01g0020181 Helianthus annuus HOM05D002578 ORTHO05D005154 9.6e-06 53.1 38 65.8
HanXRQChr04g0127451 Helianthus annuus HOM05D002578 ORTHO05D005154 9.6e-06 53.1 38 65.8
HanXRQChr10g0284421 Helianthus annuus HOM05D002578 ORTHO05D005154 9.6e-06 53.1 38 65.8
HanXRQChr10g0318021 Helianthus annuus HOM05D002578 ORTHO05D005154 9.6e-06 53.1 38 65.8
HanXRQChr12g0369891 Helianthus annuus HOM05D002578 ORTHO05D005154 9.6e-06 53.1 38 65.8
HanXRQCPg0580221 Helianthus annuus HOM05D002578 ORTHO05D005154 9.6e-06 53.1 38 65.8


User provided reference genes

Program Settings