Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr22g0356411 Lupinus albus HOM05D004586 ORTHO05D005266 9.5e-289 996.5 646 100.0
Phvul.011G112400 Phaseolus vulgaris HOM05D004586 ORTHO05D005266 3.9e-48 197.2 458 33.6
VMungo1127G2109 Vigna mungo HOM05D004586 ORTHO05D005266 1.9e-47 194.9 457 34.1
Medtr0072s0050 Medicago truncatula HOM05D004586 ORTHO05D005266 1.6e-46 191.8 518 32.8
CSS0039758 Camellia sinensis var. sinensis HOM05D004586 ORTHO05D005266 3.6e-46 190.7 206 52.4
RcHm_v2.0_Chr2g0162091 Rosa chinensis HOM05D004586 ORTHO05D005266 3.1e-45 187.6 227 47.6
FvH4_6g44910 Fragaria vesca HOM05D004586 ORTHO05D005266 8.9e-45 186.0 238 45.8
CiPaw.03G171000 Carya illinoinensis HOM05D004586 ORTHO05D005266 1.5e-44 185.3 154 58.4
FAN09G2343 Fragaria x ananassa HOM05D004586 ORTHO05D005266 2.6e-44 184.5 238 45.8
Actinidia12449 Actinidia chinensis HOM05D004586 ORTHO05D005266 5.8e-44 183.3 189 52.9
FAN02G1766 Fragaria x ananassa HOM05D004586 ORTHO05D005266 5.8e-44 183.3 238 45.8
Psat5g270160 Pisum sativum HOM05D004586 ORTHO05D005266 7.5e-44 183.0 235 46.0
Ciclev10014470m.g Citrus clementina HOM05D004586 ORTHO05D005266 1.3e-43 182.2 242 45.5
FAN05G3704 Fragaria x ananassa HOM05D004586 ORTHO05D005266 1.3e-43 182.2 237 45.1
Actinidia09891 Actinidia chinensis HOM05D004586 ORTHO05D005266 1.7e-43 181.8 185 53.0
Haze_13103 Corylus avellana HOM05D004586 ORTHO05D005266 1.7e-43 181.8 189 49.2
FAN14G4866 Fragaria x ananassa HOM05D004586 ORTHO05D005266 1.7e-43 181.8 216 47.7
MSTRG.14187 Avicennia marina HOM05D004586 ORTHO05D005266 2.2e-43 181.4 231 47.2
Psat0s4261g0040 Pisum sativum HOM05D004586 ORTHO05D005266 2.2e-43 181.4 171 58.5
COL.COLO4_13701 Corchorus olitorius HOM05D004586 ORTHO05D005266 4.9e-43 180.3 201 49.8
SGA_v2.0_scaffold49G18309 Striga asiatica HOM05D004586 ORTHO05D005266 8.3e-43 179.5 200 49.5
arahy.Tifrunner.gnm1.ann1.FC6AAX Arachis hypogaea HOM05D004586 ORTHO05D005266 1.1e-42 179.1 300 42.7
CANSAT64G2104 Cannabis sativa HOM05D004586 ORTHO05D005266 1.9e-42 178.3 191 47.6
SGA_v2.0_scaffold159G37633 Striga asiatica HOM05D004586 ORTHO05D005266 1.9e-42 178.3 204 49.0
TPR.G21660 Trifolium pratense HOM05D004586 ORTHO05D005266 1.9e-42 178.3 200 51.5
Manes.12G079600 Manihot esculenta HOM05D004586 ORTHO05D005266 2.4e-42 177.9 236 47.5
Migut.H01030 Erythranthe guttata HOM05D004586 ORTHO05D005266 3.2e-42 177.6 196 48.0
Peaxi162Scf00007g02845 Petunia axillaris HOM05D004586 ORTHO05D005266 3.2e-42 177.6 208 48.6
Cpa.g.sc34.112 Carica papaya HOM05D004586 ORTHO05D005266 4.1e-42 177.2 173 53.8
MELO3C021880.2 Cucumis melo HOM05D004586 ORTHO05D005266 4.1e-42 177.2 159 55.3
MD17G1081900 Malus domestica HOM05D004586 ORTHO05D005266 4.1e-42 177.2 187 49.7
TAR627G0949 Trochodendron aralioides HOM05D004586 ORTHO05D005266 4.1e-42 177.2 188 54.3
GSVIVG01030569001 Vitis vinifera HOM05D004586 ORTHO05D005266 4.1e-42 177.2 204 49.0
Prupe.3G233000 Prunus persica HOM05D004586 ORTHO05D005266 5.4e-42 176.8 237 44.7
Cfa014556 Carpinus fangiana HOM05D004586 ORTHO05D005266 7.0e-42 176.4 195 49.2
Lj1C734T7 Lonicera japonica HOM05D004586 ORTHO05D005266 7.0e-42 176.4 226 46.9
Atru.chr6.3049 Acer truncatum HOM05D004586 ORTHO05D005266 1.2e-41 175.6 215 47.0
Ca_27565_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 1.6e-41 175.3 343 38.2
MD09G1092000 Malus domestica HOM05D004586 ORTHO05D005266 1.6e-41 175.3 229 44.5
MELO3C003861.2 Cucumis melo HOM05D004586 ORTHO05D005266 2.0e-41 174.9 231 45.0
Gorai.013G166800 Gossypium raimondii HOM05D004586 ORTHO05D005266 2.0e-41 174.9 169 52.1
Nitab4.5_0009520g0030 Nicotiana tabacum HOM05D004586 ORTHO05D005266 2.7e-41 174.5 208 49.5
PSO675G0516 Papaver somniferum HOM05D004586 ORTHO05D005266 2.7e-41 174.5 177 52.5
Hund09647 Selenicereus undatus HOM05D004586 ORTHO05D005266 3.5e-41 174.1 130 61.5
PSO541G0834 Papaver somniferum HOM05D004586 ORTHO05D005266 6.0e-41 173.3 177 50.8
TAR629G0893 Trochodendron aralioides HOM05D004586 ORTHO05D005266 6.0e-41 173.3 132 61.4
arahy.Tifrunner.gnm1.ann1.SANC69 Arachis hypogaea HOM05D004586 ORTHO05D005266 1.0e-40 172.6 300 42.0
COL.COLO4_08510 Corchorus olitorius HOM05D004586 ORTHO05D005266 1.0e-40 172.6 174 52.9
Eucgr.B03848 Eucalyptus grandis HOM05D004586 ORTHO05D005266 1.0e-40 172.6 237 46.8
Glyma.06G297000 Glycine max HOM05D004586 ORTHO05D005266 1.0e-40 172.6 132 62.9
Gohir.D13G149100 Gossypium hirsutum HOM05D004586 ORTHO05D005266 1.0e-40 172.6 168 53.0
Sed0007770 Sechium edule HOM05D004586 ORTHO05D005266 1.0e-40 172.6 214 46.7
ATR0693G407 Amborella trichopoda HOM05D004586 ORTHO05D005266 1.3e-40 172.2 178 51.1
CARHR002890 Cardamine hirsuta HOM05D004586 ORTHO05D005266 1.3e-40 172.2 157 55.4
Hma1.2p1_0875F.1_g231553 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 1.7e-40 171.8 205 48.3
Hma1.2p1_0875F.1_g231580 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 1.7e-40 171.8 205 48.3
Lsat_1_v5_gn_4_68860 Lactuca sativa HOM05D004586 ORTHO05D005266 1.7e-40 171.8 196 48.0
Lj3g0023901 Lotus japonicus HOM05D004586 ORTHO05D005266 1.7e-40 171.8 215 47.4
Nitab4.5_0003018g0070 Nicotiana tabacum HOM05D004586 ORTHO05D005266 1.7e-40 171.8 207 48.8
Carub.0001s0267 Capsella rubella HOM05D004586 ORTHO05D005266 2.3e-40 171.4 157 54.8
Ca_20687_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 3.9e-40 170.6 511 30.7
Gohir.A13G144300 Gossypium hirsutum HOM05D004586 ORTHO05D005266 3.9e-40 170.6 183 48.6
MBI02_g10548_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 3.9e-40 170.6 196 49.0
QL10p048480 Quercus lobata HOM05D004586 ORTHO05D005266 3.9e-40 170.6 193 47.2
Sp1g02460 Schrenkiella parvula HOM05D004586 ORTHO05D005266 3.9e-40 170.6 161 54.7
ClCG02G017410 Citrullus lanatus HOM05D004586 ORTHO05D005266 6.6e-40 169.9 199 48.7
Rhsim06G0149700 Rhododendron simsii HOM05D004586 ORTHO05D005266 6.6e-40 169.9 130 60.0
CDE02G0135 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 8.6e-40 169.5 169 49.1
Sc12g0002770 Simmondsia chinensis HOM05D004586 ORTHO05D005266 8.6e-40 169.5 186 48.9
Thhalv10006867m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 1.1e-39 169.1 182 49.5
THA.LOC104826023 Tarenaya hassleriana HOM05D004586 ORTHO05D005266 1.1e-39 169.1 237 45.1
AT1G03530 Arabidopsis thaliana HOM05D004586 ORTHO05D005266 1.9e-39 168.3 132 58.3
CsaV3_2G036510 Cucumis sativus L. HOM05D004586 ORTHO05D005266 1.9e-39 168.3 234 44.0
Duzib052G0504 Durio zibethinus HOM05D004586 ORTHO05D005266 1.9e-39 168.3 219 45.2
PGSC0003DMG400018364 Solanum tuberosum HOM05D004586 ORTHO05D005266 1.9e-39 168.3 210 47.1
CAN.G78.83 Capsicum annuum HOM05D004586 ORTHO05D005266 2.5e-39 167.9 130 60.0
Duzib106G1111 Durio zibethinus HOM05D004586 ORTHO05D005266 2.5e-39 167.9 232 44.4
Lalb_Chr01g0005391 Lupinus albus HOM05D004586 ORTHO05D005266 2.5e-39 167.9 569 29.3
Medtr2g090095 Medicago truncatula HOM05D004586 ORTHO05D005266 2.5e-39 167.9 340 37.1
SalBow1G4799 Salvia bowleyana HOM05D004586 ORTHO05D005266 2.5e-39 167.9 182 51.6
SalBow7G1236 Salvia bowleyana HOM05D004586 ORTHO05D005266 2.5e-39 167.9 182 51.6
Thecc.02G173500 Theobroma cacao HOM05D004586 ORTHO05D005266 2.5e-39 167.9 174 51.1
AUR62000198 Chenopodium quinoa HOM05D004586 ORTHO05D005266 4.3e-39 167.2 186 49.5
AL1G13040 Arabidopsis lyrata HOM05D004586 ORTHO05D005266 7.3e-39 166.4 157 52.9
EL10As5g23555 Beta vulgaris HOM05D004586 ORTHO05D005266 9.5e-39 166.0 204 46.6
C05p01990 Brassica napus HOM05D004586 ORTHO05D005266 9.5e-39 166.0 134 57.5
Potri.013G145300 Populus trichocarpa HOM05D004586 ORTHO05D005266 9.5e-39 166.0 191 47.1
Potri.019G104400 Populus trichocarpa HOM05D004586 ORTHO05D005266 9.5e-39 166.0 157 53.5
Sopen07g028400 Solanum pennellii HOM05D004586 ORTHO05D005266 9.5e-39 166.0 209 46.4
PSO384G2677 Papaver somniferum HOM05D004586 ORTHO05D005266 1.2e-38 165.6 176 51.7
PGR042G3101 Punica granatum HOM05D004586 ORTHO05D005266 1.2e-38 165.6 221 46.2
AUR62035735 Chenopodium quinoa HOM05D004586 ORTHO05D005266 1.6e-38 165.2 223 43.0
ECA234G1777 Erigeron canadensis HOM05D004586 ORTHO05D005266 2.1e-38 164.9 203 47.8
HanXRQChr05g0140481 Helianthus annuus HOM05D004586 ORTHO05D005266 2.8e-38 164.5 203 46.8
BraA10t42477Z Brassica rapa HOM05D000330 ORTHO05D000209 3.6e-38 164.1 190 46.3
Lj3g0000702 Lotus japonicus HOM05D004586 ORTHO05D005266 3.6e-38 164.1 301 41.2
Oeu025511.1 Olea europaea HOM05D004586 ORTHO05D005266 6.2e-38 163.3 205 45.9
BcaC05g24523 Brassica carinata HOM05D004586 ORTHO05D005266 8.1e-38 162.9 194 46.9
BolC5t28977H Brassica oleracea HOM05D004586 ORTHO05D005266 8.1e-38 162.9 194 46.9
HanXRQChr14g0441421 Helianthus annuus HOM05D004586 ORTHO05D005266 8.1e-38 162.9 203 45.3
HPP92_014062 Vanilla planifolia HOM05D004586 ORTHO05D005266 1.1e-37 162.5 265 41.1
unitig_26.g9937 Utricularia gibba HOM05D004586 ORTHO05D005266 1.4e-37 162.2 208 46.2
BcaB02g06919 Brassica carinata HOM05D004586 ORTHO05D005266 2.3e-37 161.4 157 52.2
C08p00660 Brassica napus HOM05D004586 ORTHO05D005266 2.3e-37 161.4 238 43.3
Sabra13G0117000 Salix brachista HOM05D004586 ORTHO05D005266 3.1e-37 161.0 229 43.2
Solyc07g054460.4 Solanum lycopersicum HOM05D004586 ORTHO05D005266 3.1e-37 161.0 201 47.8
TWI18G0514 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 4.0e-37 160.6 220 43.6
TWI36G0730 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 4.0e-37 160.6 262 40.5
DCAR_019194 Daucus carota HOM05D004586 ORTHO05D005266 5.2e-37 160.2 117 62.4
A10p02080 Brassica napus HOM05D000330 ORTHO05D005266 8.9e-37 159.5 194 46.4
A08p37340 Brassica napus HOM05D004586 ORTHO05D005266 1.5e-36 158.7 207 44.0
vmacro12267 Vaccinium macrocarpon HOM05D004586 ORTHO05D005266 1.5e-36 158.7 246 39.4
BolC8t46864H Brassica oleracea HOM05D004586 ORTHO05D005266 2.6e-36 157.9 228 42.5
Peaxi162Scf00485g00032 Petunia axillaris HOM05D004586 ORTHO05D005266 4.4e-36 157.1 160 50.6
BraA08t35631Z Brassica rapa HOM05D004586 ORTHO05D005266 5.8e-36 156.8 235 41.3
Glyma.12G108100 Glycine max HOM05D004586 ORTHO05D005266 2.2e-35 154.8 487 29.4
Cc00_g21120 Coffea canephora HOM05D004586 ORTHO05D005266 4.9e-35 153.7 219 42.9
Zm00001eb292050 Zea mays HOM05D004586 ORTHO05D005266 1.9e-34 151.8 205 42.4
Os05g0502800 Oryza sativa ssp. japonica HOM05D004586 ORTHO05D005266 4.1e-34 150.6 223 39.9
SHI10466 Sapria himalayana HOM05D004586 ORTHO05D005266 7.1e-34 149.8 153 49.0
Ah.01g003940 Amaranthus hybridus HOM05D004586 ORTHO05D005266 2.7e-33 147.9 190 46.8
Aa31LG1G20890 Aethionema arabicum HOM05D004586 ORTHO05D005266 3.0e-32 144.4 192 43.8
arahy.Tifrunner.gnm1.ann1.7D4Z5S Arachis hypogaea HOM05D004586 ORTHO05D005266 6.6e-32 143.3 663 33.5
CDE02G4059 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 6.6e-32 143.3 149 50.3
TPR.G27075 Trifolium pratense HOM05D004586 ORTHO05D005266 6.6e-32 143.3 365 33.7
CAN.G996.7 Capsicum annuum HOM05D004586 ORTHO05D005266 1.1e-31 142.5 195 44.6
Nn1g03938 Nelumbo nucifera HOM05D004586 ORTHO05D005266 1.1e-31 142.5 213 44.1
Thhalv10024822m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 2.5e-31 141.4 198 40.4
SEGI_15076 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 2.1e-30 138.3 228 39.0
Nitab4.5_0007732g0010 Nicotiana tabacum HOM05D004586 ORTHO05D005266 4.7e-30 137.1 160 50.0
arahy.Tifrunner.gnm1.ann1.IS01QF Arachis hypogaea HOM05D004586 ORTHO05D005266 1.1e-29 136.0 654 33.0
AagrBONN_evm.TU.Sc2ySwM_117.2920 Anthoceros agrestis HOM05D004586 ORTHO05D005266 9.9e-28 129.4 178 43.3
SEGI_36208 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 4.9e-27 127.1 136 46.3
Dinv15471 Davidia involucrata HOM05D004586 ORTHO05D005266 4.6e-25 120.6 169 42.0
SMO137G0274 Selaginella moellendorffii HOM05D004586 ORTHO05D005266 1.3e-24 119.0 136 45.6
Mapoly0108s0039 Marchantia polymorpha HOM05D004586 ORTHO05D005266 3.9e-24 117.5 134 42.5
CBR_g12767 Chara braunii HOM05D004586 ORTHO05D005266 1.9e-23 115.2 195 38.5
Pp3c14_14050 Physcomitrium patens HOM05D004586 ORTHO05D005266 1.4e-18 99.0 182 35.7
Pp3c10_10230 Physcomitrium patens HOM05D004586 ORTHO05D005266 6.6e-16 90.1 218 32.1
BcaB01g00913 Brassica carinata HOM05D004586 ORTHO05D005266 6.2e-14 83.6 66 59.1
BcaB08g36102 Brassica carinata HOM05D004586 ORTHO05D005266 8.1e-14 83.2 66 59.1
Medtr7g116780 Medicago truncatula HOM05D004586 ORTHO05D005266 9.9e-12 76.3 71 53.5
Psat0s10217g0080 Pisum sativum HOM05D004586 ORTHO05D005266 1.3e-11 75.9 96 51.0
MBI02_g27225_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 1.7e-11 75.5 196 32.7
AL2G23840 Arabidopsis lyrata HOM05D020923 ORTHO05D021440 8.7e-08 63.2 107 37.4
Carub.0006s3370 Capsella rubella HOM05D020923 ORTHO05D021440 2.5e-07 61.6 146 30.8


User provided reference genes

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