Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 2.6e-253 878.2 441 100.0
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 4.0e-198 694.9 428 81.3
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 1.7e-196 689.5 429 80.0
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 8.4e-196 687.2 427 80.3
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 4.2e-195 684.9 427 80.3
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 4.6e-194 681.4 427 80.3
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 7.8e-194 680.6 427 79.9
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 3.9e-193 678.3 412 82.3
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 5.6e-192 674.5 420 79.8
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 2.1e-191 672.5 427 78.7
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 9.0e-182 640.6 427 73.5
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 7.6e-181 637.5 427 74.2
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 2.2e-180 636.0 428 74.5
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 1.4e-179 633.3 431 73.1
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 2.5e-179 632.5 426 73.9
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 4.2e-179 631.7 434 72.8
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 7.1e-179 630.9 419 74.2
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 9.3e-179 630.6 423 73.8
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 2.7e-178 629.0 419 74.0
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 1.3e-177 626.7 428 74.1
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 1.8e-177 626.3 423 73.5
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 3.9e-177 625.2 428 73.6
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 5.1e-177 624.8 427 72.4
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 8.7e-177 624.0 430 72.6
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 1.5e-176 623.2 430 71.2
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 1.5e-176 623.2 429 73.9
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.9e-176 622.9 427 72.1
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 2.5e-176 622.5 430 71.4
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 3.3e-176 622.1 430 71.9
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 5.6e-176 621.3 428 72.4
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 9.6e-176 620.5 426 71.8
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 1.3e-175 620.2 426 71.6
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 1.3e-175 620.2 428 73.6
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 1.6e-175 619.8 458 67.7
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 2.8e-175 619.0 430 71.2
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 2.8e-175 619.0 430 71.4
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 2.8e-175 619.0 427 71.7
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 6.2e-175 617.8 427 72.6
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 6.2e-175 617.8 427 72.6
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 4.0e-174 615.1 430 70.0
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 1.7e-172 609.8 425 71.3
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 2.9e-172 609.0 425 70.6
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 3.8e-172 608.6 437 69.3
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 1.1e-171 607.1 422 70.1
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.9e-171 606.3 425 70.4
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 2.5e-171 605.9 428 70.3
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 4.2e-171 605.1 442 69.9
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 1.6e-170 603.2 428 69.4
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 1.6e-170 603.2 422 70.9
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 5.1e-169 598.2 421 69.4
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 1.6e-167 593.2 427 67.7
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 2.2e-167 592.8 433 68.1
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 2.2e-167 592.8 433 67.7
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 2.2e-167 592.8 425 68.0
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 2.2e-167 592.8 431 67.3
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 3.7e-167 592.0 420 69.8
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 3.7e-167 592.0 425 68.5
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 8.2e-167 590.9 420 69.8
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 1.8e-166 589.7 428 68.0
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 1.8e-166 589.7 431 67.1
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 2.4e-166 589.3 426 67.1
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 5.3e-166 588.2 421 67.9
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 9.0e-166 587.4 425 69.2
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.2e-165 587.0 420 69.5
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.2e-165 587.0 420 69.5
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 2.6e-165 585.9 425 69.2
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 2.6e-165 585.9 425 69.2
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 2.6e-165 585.9 425 68.7
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 4.5e-165 585.1 425 69.2
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 2.2e-164 582.8 425 69.2
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 2.9e-164 582.4 417 67.6
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 2.9e-164 582.4 420 67.9
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 5.0e-164 581.6 422 68.5
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 8.5e-164 580.9 422 67.5
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 1.4e-163 580.1 420 68.6
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 1.4e-163 580.1 422 68.2
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.4e-163 580.1 422 68.5
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 7.2e-163 577.8 424 67.9
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 7.2e-163 577.8 424 67.9
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 9.4e-163 577.4 432 66.9
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 1.2e-162 577.0 418 68.4
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 2.1e-162 576.2 432 68.3
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 2.7e-162 575.9 418 68.9
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 7.9e-162 574.3 447 64.7
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 3.0e-161 572.4 417 67.4
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 1.5e-160 570.1 418 67.9
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 2.0e-160 569.7 478 61.1
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 7.4e-160 567.8 445 64.0
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 1.3e-159 567.0 544 57.7
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 6.3e-159 564.7 445 62.7
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 2.4e-158 562.8 422 64.7
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 3.1e-158 562.4 426 64.8
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 6.9e-158 561.2 421 65.8
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 1.0e-156 557.4 419 64.9
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 5.0e-156 555.1 430 65.6
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 3.0e-153 545.8 418 63.9
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 8.8e-153 544.3 420 64.0
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 1.6e-146 523.5 427 59.3
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 5.2e-145 518.5 419 63.2
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 4.4e-144 515.4 414 62.8
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 5.9e-141 505.0 422 59.0
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 2.0e-136 490.0 334 73.7
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 6.3e-135 485.0 429 56.2
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 2.5e-131 473.0 355 65.6
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 2.7e-130 469.5 421 54.2
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 1.0e-129 467.6 435 57.2
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 3.0e-129 466.1 422 57.6
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 9.8e-128 461.1 432 51.9
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.2e-122 444.1 422 52.6
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 4.7e-122 442.2 298 71.5
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 7.5e-120 434.9 348 63.2
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 3.9e-116 422.5 434 53.0
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 1.2e-112 411.0 257 77.0
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 2.0e-112 410.2 435 47.4
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 2.7e-109 399.8 421 53.0
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 6.6e-108 395.2 270 71.5
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 1.2e-90 337.8 192 83.3
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 2.1e-82 310.5 422 41.5
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 6.2e-74 282.3 261 53.6
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 1.2e-64 251.5 287 49.8
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 5.5e-62 242.7 183 67.2
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 1.8e-41 174.5 139 69.1
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 1.2e-29 135.2 95 67.4
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 8.0e-29 132.5 92 67.4
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 1.1e-27 128.6 90 64.4
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 2.9e-23 114.0 85 61.2
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 6.5e-15 86.3 375 24.8
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 9.2e-09 65.9 90 44.4


User provided reference genes

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