Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 2.7e-96 355.9 265 100.0
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 9.6e-54 214.5 283 73.1
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 5.4e-49 198.7 283 71.0
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 4.6e-48 195.7 264 71.6
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 1.3e-47 194.1 271 72.7
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 3.1e-44 183.0 266 66.9
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 2.2e-42 176.8 267 65.9
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 1.8e-39 167.2 267 62.9
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 1.8e-39 167.2 287 64.8
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 9.6e-38 161.4 266 61.7
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 2.1e-37 160.2 291 61.2
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 3.7e-37 159.5 276 65.6
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 4.8e-37 159.1 274 65.7
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 8.1e-37 158.3 269 51.7
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 4.5e-35 152.5 265 40.8
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 1.3e-34 151.0 274 66.4
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 2.9e-34 149.8 283 65.0
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 6.5e-34 148.7 285 63.2
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 6.5e-34 148.7 279 63.4
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 1.9e-33 147.1 285 64.6
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 2.5e-33 146.7 279 64.2
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 3.2e-33 146.4 279 62.4
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 4.2e-33 146.0 275 56.7
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 7.1e-33 145.2 275 56.7
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 1.6e-32 144.1 274 64.2
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 2.1e-32 143.7 277 56.7
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 1.3e-31 141.0 281 65.1
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 2.3e-31 140.2 265 63.4
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 5.1e-31 139.0 272 56.2
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 5.1e-31 139.0 282 63.5
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 5.1e-31 139.0 285 58.6
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 8.7e-31 138.3 275 64.4
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 1.1e-30 137.9 288 62.8
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 1.6e-29 134.0 241 69.3
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 1.6e-29 134.0 285 63.9
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 2.1e-29 133.7 285 62.8
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 2.8e-29 133.3 284 61.3
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 2.8e-29 133.3 273 56.0
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 2.8e-29 133.3 268 65.3
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 4.8e-29 132.5 273 61.5
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 1.1e-28 131.3 283 61.5
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 2.4e-28 130.2 276 56.2
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 2.4e-28 130.2 268 64.9
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 6.9e-28 128.6 276 63.0
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 1.2e-27 127.9 261 49.0
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 2.6e-27 126.7 280 63.6
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 2.6e-27 126.7 280 59.6
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 2.6e-27 126.7 316 54.4
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 2.6e-27 126.7 283 61.5
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 3.4e-27 126.3 271 61.3
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 3.4e-27 126.3 271 61.6
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 7.6e-27 125.2 274 61.7
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 1.3e-26 124.4 279 59.9
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 1.7e-26 124.0 288 61.8
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 2.2e-26 123.6 272 62.1
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 2.9e-26 123.2 248 65.3
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 6.5e-26 122.1 282 54.6
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 6.5e-26 122.1 283 54.4
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 1.4e-25 120.9 273 54.2
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.4e-25 120.9 282 54.6
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 1.9e-25 120.6 283 59.4
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 9.3e-25 118.2 271 60.5
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 9.3e-25 118.2 276 59.8
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.6e-24 117.5 238 59.2
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 2.1e-24 117.1 288 59.4
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 2.7e-24 116.7 278 54.3
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 3.5e-24 116.3 268 61.6
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 1.8e-23 114.0 162 64.2
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 3.9e-23 112.8 97 61.9
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 3.9e-23 112.8 97 61.9
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 5.1e-23 112.5 273 59.3
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 6.7e-23 112.1 258 51.9
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 1.5e-22 110.9 99 60.6
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 1.5e-22 110.9 106 59.4
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 1.5e-22 110.9 106 59.4
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 2.5e-22 110.2 274 57.3
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 2.5e-22 110.2 153 54.2
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 3.3e-22 109.8 282 53.5
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 7.4e-22 108.6 95 58.9
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 9.7e-22 108.2 103 56.3
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 1.3e-21 107.8 102 57.8
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 1.3e-21 107.8 100 59.0
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 2.2e-21 107.1 95 56.8
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 2.2e-21 107.1 276 54.0
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 6.3e-21 105.5 272 59.9
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 1.4e-20 104.4 102 56.9
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 1.8e-20 104.0 95 57.9
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 1.8e-20 104.0 100 58.0
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 4.1e-20 102.8 98 56.1
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 4.1e-20 102.8 274 54.4
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 1.2e-19 101.3 104 54.8
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 1.2e-19 101.3 104 54.8
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 5.9e-19 99.0 304 45.1
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 2.9e-18 96.7 101 54.5
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 4.6e-16 89.4 96 50.0
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 6.1e-16 89.0 279 57.0
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 1.8e-15 87.4 233 60.9
arahy.Tifrunner.gnm1.ann1.4PMG8D Arachis hypogaea HOM05D000368 ORTHO05D009348 3.0e-15 86.7 77 63.6
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 2.8e-13 80.1 286 53.8
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 6.5e-10 68.9 96 47.9
arahy.Tifrunner.gnm1.ann1.QCHX4X Arachis hypogaea HOM05D000368 ORTHO05D009348 8.5e-10 68.6 44 77.3
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 1.2e-08 64.7 285 44.6
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 4.7e-08 62.8 43 62.8
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 6.1e-08 62.4 83 50.6
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 1.0e-07 61.6 102 50.0
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 1.4e-07 61.2 119 36.1
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 6.7e-07 58.9 99 38.4
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 1.1e-06 58.2 33 72.7
Nitab4.5_0001842g0090 Nicotiana tabacum HOM05D000368 ORTHO05D009348 1.1e-06 58.2 91 40.7


User provided reference genes

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