Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 5.9e-74 280.8 144 100.0
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 5.7e-69 264.2 142 93.7
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 5.7e-69 264.2 142 93.7
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 8.3e-68 260.4 144 93.1
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 1.4e-67 259.6 144 89.6
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 5.4e-67 257.7 144 91.7
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 2.0e-66 255.8 144 91.0
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 5.9e-66 254.2 144 86.8
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 1.0e-65 253.4 144 87.5
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 1.3e-65 253.1 144 86.8
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 3.8e-65 251.5 144 86.8
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 8.6e-65 250.4 144 87.5
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 1.1e-64 250.0 144 90.3
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 1.1e-64 250.0 140 90.0
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 5.5e-64 247.7 144 86.8
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 1.2e-63 246.5 146 87.0
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 1.2e-63 246.5 144 86.8
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 2.1e-63 245.7 145 86.9
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 2.8e-63 245.4 142 86.6
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 2.8e-63 245.4 146 87.0
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 4.7e-63 244.6 145 88.3
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 6.1e-63 244.2 144 87.5
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 8.0e-63 243.8 141 88.7
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 1.0e-62 243.4 157 78.3
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 1.8e-62 242.7 144 85.4
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 2.3e-62 242.3 145 85.5
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 6.8e-62 240.7 142 85.2
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 1.5e-61 239.6 146 84.2
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 1.5e-61 239.6 143 84.6
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 2.6e-61 238.8 134 90.3
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 4.4e-61 238.0 142 84.5
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 5.7e-61 237.7 144 84.0
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 9.8e-61 236.9 145 84.8
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 1.3e-60 236.5 144 84.7
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 3.7e-60 235.0 132 90.9
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 3.7e-60 235.0 145 84.1
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 3.7e-60 235.0 144 83.3
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 8.3e-60 233.8 145 81.4
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 8.3e-60 233.8 145 82.1
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 8.3e-60 233.8 144 85.4
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.4e-59 233.0 145 83.4
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 1.4e-59 233.0 145 83.4
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 1.8e-59 232.6 144 84.0
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 1.8e-59 232.6 146 82.9
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.8e-59 232.6 143 81.8
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 2.4e-59 232.3 145 83.4
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 2.4e-59 232.3 144 82.6
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 4.1e-59 231.5 132 87.1
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 5.4e-59 231.1 145 81.4
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 5.4e-59 231.1 145 81.4
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 7.0e-59 230.7 145 81.4
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 9.2e-59 230.3 145 80.7
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 9.2e-59 230.3 145 80.7
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 1.6e-58 229.6 145 80.7
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 2.7e-58 228.8 145 79.3
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 2.7e-58 228.8 145 80.0
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 2.7e-58 228.8 130 87.7
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 3.5e-58 228.4 145 79.3
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 3.5e-58 228.4 145 80.0
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 4.5e-58 228.0 145 79.3
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 4.5e-58 228.0 144 80.6
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 4.5e-58 228.0 144 80.6
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 4.5e-58 228.0 144 80.6
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 7.8e-58 227.3 145 80.0
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 7.8e-58 227.3 145 80.0
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 1.0e-57 226.9 145 79.3
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 1.3e-57 226.5 145 78.6
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.3e-57 226.5 144 79.9
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 3.8e-57 224.9 145 78.6
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 3.8e-57 224.9 145 78.6
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 3.8e-57 224.9 145 78.6
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 3.8e-57 224.9 145 78.6
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 3.8e-57 224.9 145 78.6
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 3.8e-57 224.9 145 78.6
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 5.0e-57 224.6 145 79.3
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 5.0e-57 224.6 145 78.6
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 5.0e-57 224.6 130 86.2
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 5.0e-57 224.6 142 83.1
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 6.6e-57 224.2 146 82.9
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 6.6e-57 224.2 146 82.9
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 6.6e-57 224.2 145 78.6
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 1.1e-56 223.4 145 77.9
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 1.5e-56 223.0 146 78.8
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 4.3e-56 221.5 146 78.8
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 7.3e-56 220.7 144 79.9
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 1.6e-55 219.5 146 79.5
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 2.1e-55 219.2 145 80.7
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 2.8e-55 218.8 144 78.5
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 2.8e-55 218.8 144 81.2
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 4.7e-55 218.0 145 80.0
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 4.7e-55 218.0 146 79.5
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 4.7e-55 218.0 146 80.8
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 4.7e-55 218.0 146 80.1
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 1.0e-54 216.9 201 61.2
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 1.0e-54 216.9 146 78.1
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 1.0e-54 216.9 145 80.7
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 1.8e-54 216.1 145 80.0
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 2.3e-54 215.7 146 78.8
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 5.2e-54 214.5 146 78.1
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 8.9e-54 213.8 131 82.4
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 8.9e-54 213.8 146 77.4
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 1.2e-53 213.4 145 77.9
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 1.5e-53 213.0 142 79.6
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 2.0e-53 212.6 144 78.5
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 2.0e-53 212.6 145 79.3
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.0e-53 212.6 145 79.3
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 2.0e-53 212.6 145 79.3
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 2.6e-53 212.2 142 78.9
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 4.4e-53 211.5 143 78.3
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 7.5e-53 210.7 145 78.6
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 9.8e-53 210.3 144 76.4
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 2.2e-52 209.1 145 77.9
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 2.2e-52 209.1 145 77.9
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 2.9e-52 208.8 146 76.0
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.9e-52 208.8 145 78.6
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 4.9e-52 208.0 145 77.2
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 7.0e-51 204.1 146 76.0
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 9.2e-51 203.8 143 74.8
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 1.6e-50 203.0 136 80.1
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 3.5e-50 201.8 150 75.3
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 6.0e-50 201.1 144 75.7
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 1.0e-49 200.3 128 82.8
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 1.3e-49 199.9 144 75.7
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 5.0e-49 198.0 149 75.8
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 8.6e-49 197.2 182 63.2
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 1.5e-48 196.4 147 73.5
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 1.9e-48 196.1 145 75.2
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 1.9e-48 196.1 145 75.2
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 1.9e-48 196.1 145 75.2
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 3.3e-48 195.3 133 77.4
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 9.5e-48 193.7 144 74.3
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 3.6e-47 191.8 145 73.8
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 4.7e-47 191.4 142 74.6
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 6.8e-46 187.6 168 63.1
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 5.8e-45 184.5 144 72.9
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 5.8e-45 184.5 142 72.5
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 4.9e-44 181.4 120 78.3
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 6.4e-44 181.0 144 70.1
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 8.3e-44 180.6 144 71.5
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 3.2e-43 178.7 133 73.7
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 7.0e-43 177.6 95 90.5
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 9.2e-43 177.2 139 71.2
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 1.0e-41 173.7 146 69.9
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 2.3e-41 172.6 140 70.0
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 3.0e-41 172.2 115 79.1
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 3.9e-41 171.8 145 68.3
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 6.6e-41 171.0 145 65.5
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 6.6e-41 171.0 132 70.5
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 6.6e-41 171.0 133 74.4
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 6.6e-41 171.0 145 66.9
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 1.5e-40 169.9 120 78.3
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 5.6e-40 167.9 137 73.0
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.2e-39 166.8 127 74.8
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 3.6e-39 165.2 122 77.0
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 4.7e-39 164.9 91 89.0
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 6.8e-38 161.0 111 78.4
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 2.0e-37 159.5 145 66.9
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 1.4e-35 153.3 103 81.6
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 5.4e-35 151.4 122 72.1
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 1.6e-34 149.8 113 73.5
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 1.0e-33 147.1 142 58.5
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 8.6e-33 144.1 98 77.6
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 5.6e-32 141.4 82 81.7
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 2.6e-29 132.5 136 60.3
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 1.3e-28 130.2 130 60.0
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 6.4e-28 127.9 80 86.2
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 5.4e-27 124.8 76 86.8
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 1.2e-26 123.6 77 84.4
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.2e-26 123.6 106 71.7
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.2e-26 123.6 122 61.5
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.2e-26 123.6 122 61.5
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 7.8e-26 120.9 69 82.6
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 3.0e-25 119.0 132 55.3
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 3.9e-25 118.6 132 57.6
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 8.7e-25 117.5 64 87.5
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 3.3e-24 115.5 144 52.8
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 3.3e-24 115.5 100 69.0
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 2.2e-20 102.8 88 62.5
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 1.2e-18 97.1 81 65.4
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 2.3e-17 92.8 45 91.1
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 2.8e-15 85.9 76 65.8
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 2.3e-09 66.2 35 94.3
DCAR_013632 Daucus carota HOM05D003818 ORTHO05D175173 4.0e-06 55.5 97 48.5


User provided reference genes

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