Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0348301 Lupinus albus HOM05D006785 ORTHO05D006259 3.4e-119 432.2 307 100.0
Lalb_Chr10g0106721 Lupinus albus HOM05D006785 ORTHO05D006259 1.6e-76 290.4 307 73.9
Ca_06284_v3 Cicer arietinum L. HOM05D006785 ORTHO05D006259 2.4e-48 196.8 314 60.5
arahy.Tifrunner.gnm1.ann1.PX2Y9B Arachis hypogaea HOM05D006785 ORTHO05D006259 4.2e-45 186.0 310 56.1
Glyma.02G287000 Glycine max HOM05D006785 ORTHO05D006259 8.0e-44 181.8 317 56.5
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 1.3e-41 174.5 301 53.5
arahy.Tifrunner.gnm1.ann1.W4MS3F Arachis hypogaea HOM05D006785 ORTHO05D006259 3.7e-41 172.9 310 56.5
Medtr5g091710 Medicago truncatula HOM05D006785 ORTHO05D006259 1.2e-39 167.9 316 55.4
TPR.G12660 Trifolium pratense HOM05D006785 ORTHO05D006259 1.6e-39 167.5 313 55.0
QL08p044083 Quercus lobata HOM05D006785 ORTHO05D006259 1.1e-37 161.4 297 56.6
Psat2g015800 Pisum sativum HOM05D006785 ORTHO05D006259 2.7e-36 156.8 315 55.2
Glyma.14G027900 Glycine max HOM05D006785 ORTHO05D006259 6.1e-36 155.6 301 52.5
Cfa021376 Carpinus fangiana HOM05D006785 ORTHO05D006259 1.0e-35 154.8 298 58.1
Haze_13495 Corylus avellana HOM05D006785 ORTHO05D006259 2.6e-34 150.2 298 57.4
ClCG02G018390 Citrullus lanatus HOM05D006785 ORTHO05D006259 4.4e-34 149.4 294 48.0
VMungo0647G1995 Vigna mungo HOM05D006785 ORTHO05D006259 6.3e-33 145.6 302 46.7
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 9.1e-32 141.7 290 37.6
Phvul.008G191300 Phaseolus vulgaris HOM05D006785 ORTHO05D006259 3.5e-31 139.8 314 43.6
PGR042G2728 Punica granatum HOM05D006785 ORTHO05D006259 1.3e-30 137.9 295 44.7
CsaV3_6G015830 Cucumis sativus L. HOM05D006785 ORTHO05D006259 1.7e-30 137.5 298 42.3
Sed0007746 Sechium edule HOM05D006785 ORTHO05D006259 6.5e-30 135.6 294 52.0
arahy.Tifrunner.gnm1.ann1.SE4LXZ Arachis hypogaea HOM05D006785 ORTHO05D006259 1.1e-29 134.8 238 51.3
Manes.01G127500 Manihot esculenta HOM05D006785 ORTHO05D006259 6.1e-28 129.0 299 35.8
CANSAT64G1891 Cannabis sativa HOM05D006785 ORTHO05D006259 3.0e-27 126.7 298 46.6
Cpa.g.sc50.80 Carica papaya HOM05D006785 ORTHO05D006259 6.8e-27 125.6 295 53.2
CiPaw.03G189000 Carya illinoinensis HOM05D006785 ORTHO05D006259 6.8e-27 125.6 300 44.3
MELO3C019688.2 Cucumis melo HOM05D006785 ORTHO05D006259 1.5e-26 124.4 298 48.3
MD09G1151900 Malus domestica HOM05D006785 ORTHO05D006259 1.3e-25 121.3 247 44.1
Sed0020726 Sechium edule HOM05D006785 ORTHO05D006259 4.9e-25 119.4 300 34.3
LjContig00310g0014416 Lotus japonicus HOM05D006785 ORTHO05D006259 4.1e-24 116.3 347 41.8
Dinv07090 Davidia involucrata HOM05D006785 ORTHO05D006259 7.0e-24 115.5 322 42.5
Carub.0001s0590 Capsella rubella HOM05D006785 ORTHO05D006259 1.6e-23 114.4 291 34.4
THA.LOC104802276 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 2.7e-23 113.6 245 48.6
MD17G1139500 Malus domestica HOM05D006785 ORTHO05D006259 3.5e-23 113.2 249 44.6
Actinidia32516 Actinidia chinensis HOM05D006785 ORTHO05D006259 8.6e-22 108.6 324 30.6
AT1G06530 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 8.6e-22 108.6 296 33.1
FAN09G1973 Fragaria x ananassa HOM05D006785 ORTHO05D006259 9.5e-21 105.1 297 41.4
Sp4g24990 Schrenkiella parvula HOM05D006785 ORTHO05D006259 2.1e-20 104.0 304 32.9
Atru.chr6.2094 Acer truncatum HOM05D006785 ORTHO05D006259 2.8e-20 103.6 326 41.7
FAN14G2666 Fragaria x ananassa HOM05D006785 ORTHO05D006259 2.8e-20 103.6 299 44.1
FAN02G2853 Fragaria x ananassa HOM05D006785 ORTHO05D006259 6.1e-20 102.4 297 43.1
RcHm_v2.0_Chr2g0151481 Rosa chinensis HOM05D006785 ORTHO05D006259 1.8e-19 100.9 299 45.8
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 5.2e-19 99.4 317 30.0
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 5.2e-19 99.4 317 30.0
FAN05G2931 Fragaria x ananassa HOM05D006785 ORTHO05D006259 2.0e-18 97.4 297 39.4
Lalb_Chr05g0211951 Lupinus albus HOM05D006785 ORTHO05D006259 2.0e-18 97.4 147 44.2
Prupe.3G172600 Prunus persica HOM05D006785 ORTHO05D006259 2.9e-17 93.6 300 47.3
Eucgr.A01969 Eucalyptus grandis HOM05D006785 ORTHO05D006259 3.7e-17 93.2 294 35.4
Aa31LG5G5980 Aethionema arabicum HOM05D006785 ORTHO05D006259 6.4e-17 92.4 297 42.8
Gohir.A12G079000 Gossypium hirsutum HOM05D006785 ORTHO05D006259 6.4e-17 92.4 327 36.4
BraA05t19307Z Brassica rapa HOM05D006785 ORTHO05D006259 1.4e-16 91.3 236 33.5
Gorai.008G098200 Gossypium raimondii HOM05D006785 ORTHO05D006259 9.2e-16 88.6 327 34.3
Nn3g20927 Nelumbo nucifera HOM05D006785 ORTHO05D006259 1.6e-15 87.8 317 29.7
AT3G58840 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 3.5e-15 86.7 233 41.2
C04p03820 Brassica napus HOM05D006785 ORTHO05D006259 3.5e-15 86.7 234 32.5
BolC4t22018H Brassica oleracea HOM05D006785 ORTHO05D006259 1.0e-14 85.1 233 32.2
Gohir.D12G068400 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.0e-14 85.1 327 34.3
Thhalv10009835m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 3.0e-14 83.6 303 36.3
vmacro12460 Vaccinium macrocarpon HOM05D006785 ORTHO05D006259 3.9e-14 83.2 280 31.1
Carub.0005s2562 Capsella rubella HOM05D006785 ORTHO05D006259 4.3e-13 79.7 301 36.9
AL1G16560 Arabidopsis lyrata HOM05D006785 ORTHO05D006259 2.1e-12 77.4 292 38.4
Sp1g05290 Schrenkiella parvula HOM05D006785 ORTHO05D006259 2.1e-12 77.4 165 45.5
Potri.005G201400 Populus trichocarpa HOM05D006785 ORTHO05D006259 3.6e-12 76.6 293 37.9
Ciclev10032336m.g Citrus clementina HOM05D006785 ORTHO05D006259 8.0e-12 75.5 302 40.1
THA.LOC104800823 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 2.3e-11 73.9 175 31.4
Thecc.01G161700 Theobroma cacao HOM05D006785 ORTHO05D006259 4.0e-11 73.2 196 44.4
Duzib264G0099 Durio zibethinus HOM05D006785 ORTHO05D006259 3.4e-10 70.1 143 37.8
CARHR169250 Cardamine hirsuta HOM05D006785 ORTHO05D006259 5.8e-10 69.3 146 36.3
Peaxi162Scf00035g00291 Petunia axillaris HOM05D009485 ORTHO05D006259 7.5e-10 68.9 254 28.7
Rhsim06G0116700 Rhododendron simsii HOM05D006785 ORTHO05D006259 9.8e-10 68.6 307 28.3
Duzib147G0591 Durio zibethinus HOM05D006785 ORTHO05D006259 3.7e-09 66.6 241 41.1
Gohir.A05G378800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 4.9e-09 66.2 174 39.1
Gorai.012G041600 Gossypium raimondii HOM05D006785 ORTHO05D006259 6.4e-09 65.9 169 40.8
MBI10_g42732_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 8.3e-09 65.5 101 42.6
Lj1P620T12 Lonicera japonica HOM05D006785 ORTHO05D006259 3.2e-08 63.5 272 26.8
Gohir.D04G036800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 4.1e-08 63.2 169 39.6
AL5G40640 Arabidopsis lyrata HOM05D006785 ORTHO05D006259 5.4e-08 62.8 99 40.4
Thhalv10006112m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 7.0e-08 62.4 236 27.5
Gohir.A11G224802 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.2e-07 61.6 236 30.5
BcaB02g06783 Brassica carinata HOM05D006785 ORTHO05D006259 2.7e-07 60.5 203 46.3
Hma1.2p1_0960F.1_g241635 Hydrangea macrophylla HOM05D006785 ORTHO05D006259 3.5e-07 60.1 279 29.4
A07p24380 Brassica napus HOM05D006785 ORTHO05D006259 1.0e-06 58.5 236 36.0
CARHR006150 Cardamine hirsuta HOM05D006785 ORTHO05D006259 1.3e-06 58.2 170 29.4
Sabra02G0048700 Salix brachista HOM05D006785 ORTHO05D006259 1.7e-06 57.8 293 42.3
Actinidia11204 Actinidia chinensis HOM05D006785 ORTHO05D006259 2.3e-06 57.4 328 25.3
BcaB02g07495 Brassica carinata HOM05D006785 ORTHO05D006259 2.3e-06 57.4 317 32.5
C05p04790 Brassica napus HOM05D006785 ORTHO05D006259 2.3e-06 57.4 202 37.6
DCAR_013314 Daucus carota HOM05D006785 ORTHO05D006259 3.9e-06 56.6 313 25.6
Potri.002G060200 Populus trichocarpa HOM05D006785 ORTHO05D006259 5.0e-06 56.2 101 55.4
TAR627G0640 Trochodendron aralioides HOM05D006785 ORTHO05D006259 6.6e-06 55.8 112 37.5


User provided reference genes

Program Settings