Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0347781 Lupinus albus HOM05D002003 ORTHO05D002037 8.8e-67 256.9 139 100.0
Lalb_Chr04g0249291 Lupinus albus HOM05D002003 ORTHO05D002037 5.2e-35 151.4 99 79.8
Lalb_Chr10g0106151 Lupinus albus HOM05D002003 ORTHO05D002037 2.1e-31 139.4 99 73.7
LjContig00564g0015742 Lotus japonicus HOM05D002003 ORTHO05D002037 1.9e-29 132.9 106 67.9
Glyma.14G036300 Glycine max HOM05D002003 ORTHO05D002037 4.3e-29 131.7 105 68.6
Phvul.008G202600 Phaseolus vulgaris HOM05D002003 ORTHO05D002037 1.2e-28 130.2 105 67.6
Glyma.07G235500 Glycine max HOM05D002003 ORTHO05D002037 2.6e-26 122.5 106 66.0
Phvul.006G015900 Phaseolus vulgaris HOM05D002003 ORTHO05D002037 3.4e-26 122.1 105 64.8
Glyma.02G278300 Glycine max HOM05D002003 ORTHO05D002037 5.8e-26 121.3 105 65.7
VMungo0540G0761 Vigna mungo HOM05D002003 ORTHO05D002037 1.7e-25 119.8 105 62.9
Glyma.20G042200 Glycine max HOM05D002003 ORTHO05D002037 2.2e-25 119.4 106 64.2
Lj6g0015131 Lotus japonicus HOM05D002003 ORTHO05D002037 1.3e-22 110.2 104 63.5
arahy.Tifrunner.gnm1.ann1.7CMH8M Arachis hypogaea HOM05D002003 ORTHO05D002037 2.3e-22 109.4 106 61.3
arahy.Tifrunner.gnm1.ann1.P6ISWJ Arachis hypogaea HOM05D002003 ORTHO05D002037 2.3e-22 109.4 106 61.3
TPR.G16416 Trifolium pratense HOM05D002003 ORTHO05D002037 3.1e-19 99.0 127 51.2
Medtr3g436860 Medicago truncatula HOM05D002003 ORTHO05D002037 4.0e-19 98.6 105 55.2
Psat0s1289g0040 Pisum sativum HOM05D002003 ORTHO05D002037 9.9e-18 94.0 113 55.8
CiPaw.13G148800 Carya illinoinensis HOM05D002003 ORTHO05D002037 7.1e-16 87.8 106 55.7
Cfa009896 Carpinus fangiana HOM05D002003 ORTHO05D002037 2.1e-15 86.3 106 53.8
TPR.G24388 Trifolium pratense HOM05D002003 ORTHO05D002037 2.1e-15 86.3 107 46.7
Haze_23258 Corylus avellana HOM05D002003 ORTHO05D002037 3.5e-15 85.5 106 54.7
MELO3C014551.2 Cucumis melo HOM05D002003 ORTHO05D002037 7.8e-15 84.3 110 51.8
CsaV3_6G038860 Cucumis sativus L. HOM05D002003 ORTHO05D002037 3.0e-14 82.4 110 50.9
ClCG02G022740 Citrullus lanatus HOM05D002003 ORTHO05D002037 8.7e-14 80.9 110 50.0
Medtr5g089110 Medicago truncatula HOM05D002003 ORTHO05D002037 8.7e-14 80.9 108 46.3
Prupe.4G262500 Prunus persica HOM05D002003 ORTHO05D002037 1.9e-13 79.7 116 49.1
Sc09g0001110 Simmondsia chinensis HOM05D002003 ORTHO05D002037 2.5e-13 79.3 105 50.5
PGR119G0755 Punica granatum HOM05D002003 ORTHO05D002037 3.3e-13 79.0 106 50.0
Thecc.09G246400 Theobroma cacao HOM05D002003 ORTHO05D002037 2.1e-12 76.3 107 46.7
Duzib168G1203 Durio zibethinus HOM05D002003 ORTHO05D002037 2.8e-12 75.9 108 48.1
Nitab4.5_0006764g0010 Nicotiana tabacum HOM05D002003 ORTHO05D002037 6.2e-12 74.7 104 48.1
TAR633G2255 Trochodendron aralioides HOM05D002003 ORTHO05D002037 1.1e-11 73.9 106 50.0
CANSAT54G0357 Cannabis sativa HOM05D002003 ORTHO05D002037 3.1e-11 72.4 112 49.1
Gohir.A05G073700 Gossypium hirsutum HOM05D002003 ORTHO05D002037 3.1e-11 72.4 108 46.3
Peaxi162Scf00004g04217 Petunia axillaris HOM05D002003 ORTHO05D002037 3.1e-11 72.4 104 47.1
Sed0005786 Sechium edule HOM05D002003 ORTHO05D002037 4.0e-11 72.0 90 47.8
Actinidia06977 Actinidia chinensis HOM05D002003 ORTHO05D002037 9.0e-11 70.9 110 47.3
SGA_v2.0_scaffold8G04538 Striga asiatica HOM05D002003 ORTHO05D002037 1.5e-10 70.1 105 41.9
CAN.G468.7 Capsicum annuum HOM05D002003 ORTHO05D002037 2.0e-10 69.7 100 46.0
Dinv04577 Davidia involucrata HOM05D002003 ORTHO05D002037 2.0e-10 69.7 111 47.7
Sed0027856 Sechium edule HOM05D002003 ORTHO05D002037 5.8e-10 68.2 110 44.5
SGA_v2.0_scaffold26G11419 Striga asiatica HOM05D002003 ORTHO05D002037 7.6e-10 67.8 107 45.8
Gohir.D05G076600 Gossypium hirsutum HOM05D002003 ORTHO05D002037 9.9e-10 67.4 108 44.4
Gorai.009G077900 Gossypium raimondii HOM05D002003 ORTHO05D002037 9.9e-10 67.4 108 44.4
Oeu025911.1 Olea europaea HOM05D002003 ORTHO05D002037 9.9e-10 67.4 114 48.2
EL10Ac4g10097 Beta vulgaris HOM05D002003 ORTHO05D002037 1.3e-09 67.0 105 44.8
Nn2g14674 Nelumbo nucifera HOM05D002003 ORTHO05D002037 1.3e-09 67.0 106 50.0
CSS0013608 Camellia sinensis var. sinensis HOM05D002003 ORTHO05D002037 2.2e-09 66.2 113 46.0
CiPaw.14G111200 Carya illinoinensis HOM05D002003 ORTHO05D002037 2.9e-09 65.9 107 48.6
Dinv36153 Davidia involucrata HOM05D002003 ORTHO05D002037 2.9e-09 65.9 111 45.9
MD11G1183200 Malus domestica HOM05D002003 ORTHO05D002037 2.9e-09 65.9 113 43.4
Sabra09G0051200 Salix brachista HOM05D002003 ORTHO05D002037 4.9e-09 65.1 110 45.5
AUR62000211 Chenopodium quinoa HOM05D002003 ORTHO05D002037 6.4e-09 64.7 110 44.5
vmacro04044 Vaccinium macrocarpon HOM05D002003 ORTHO05D002037 1.1e-08 63.9 113 43.4
MSTRG.17637 Avicennia marina HOM05D002003 ORTHO05D002037 1.4e-08 63.5 106 42.5
CSS0027882 Camellia sinensis var. sinensis HOM05D002003 ORTHO05D002037 1.4e-08 63.5 113 45.1
Hma1.2p1_0252F.1_g102790 Hydrangea macrophylla HOM05D002003 ORTHO05D002037 1.4e-08 63.5 107 41.1
Potri.009G068100 Populus trichocarpa HOM05D002003 ORTHO05D002037 1.4e-08 63.5 110 46.4
AUR62006557 Chenopodium quinoa HOM05D002003 ORTHO05D002037 1.9e-08 63.2 110 43.6
Eucgr.J00678 Eucalyptus grandis HOM05D002003 ORTHO05D002037 3.2e-08 62.4 106 47.2
Hma1.2p1_0460F.1_g157560 Hydrangea macrophylla HOM05D002003 ORTHO05D002037 3.2e-08 62.4 106 46.2
Lj1C318T0 Lonicera japonica HOM05D002003 ORTHO05D002037 3.2e-08 62.4 115 43.5
Solyc11g065000.2 Solanum lycopersicum HOM05D002003 ORTHO05D002037 7.1e-08 61.2 102 44.1
Duzib150G0616 Durio zibethinus HOM05D002003 ORTHO05D002037 9.3e-08 60.8 113 43.4
PGSC0003DMG400009456 Solanum tuberosum HOM05D002003 ORTHO05D002037 9.3e-08 60.8 124 39.5
Rhsim13G0206400 Rhododendron simsii HOM05D002003 ORTHO05D002037 1.6e-07 60.1 111 41.4
HanXRQChr14g0432271 Helianthus annuus HOM05D002003 ORTHO05D002037 2.1e-07 59.7 106 41.5
Potri.001G273900 Populus trichocarpa HOM05D002003 ORTHO05D002037 2.1e-07 59.7 112 43.8
Sabra16G0168700 Salix brachista HOM05D002003 ORTHO05D002037 2.1e-07 59.7 109 42.2
Manes.02G136800 Manihot esculenta HOM05D002003 ORTHO05D002037 2.7e-07 59.3 108 47.2
TWI75G0745 Tripterygium wilfordii HOM05D002003 ORTHO05D002037 2.7e-07 59.3 101 44.6
Duzib170G0954 Durio zibethinus HOM05D002003 ORTHO05D002037 6.0e-07 58.2 109 41.3
Migut.D00674 Erythranthe guttata HOM05D002003 ORTHO05D002037 1.0e-06 57.4 113 38.1
THA.LOC104826456 Tarenaya hassleriana HOM05D002003 ORTHO05D002037 1.0e-06 57.4 101 47.5
DCAR_002097 Daucus carota HOM05D002003 ORTHO05D002037 1.3e-06 57.0 117 39.3
Lsat_1_v5_gn_2_32541 Lactuca sativa HOM05D002003 ORTHO05D002037 1.3e-06 57.0 112 42.0
TWI31G0759 Tripterygium wilfordii HOM05D002003 ORTHO05D002037 1.3e-06 57.0 101 43.6
HPP92_001028 Vanilla planifolia HOM05D002003 ORTHO05D002037 1.3e-06 57.0 103 38.8
SalBow6G5777 Salvia bowleyana HOM05D002003 ORTHO05D002037 1.7e-06 56.6 105 37.1
Aqoxy2G00433 Aquilegia oxysepala HOM05D002003 ORTHO05D002037 2.3e-06 56.2 110 40.9
MBI19_g44709_MAGBIO Magnolia biondii HOM05D002003 ORTHO05D002037 2.3e-06 56.2 106 36.8
HanXRQChr12g0380441 Helianthus annuus HOM05D002003 ORTHO05D002037 5.1e-06 55.1 113 37.2
Ah.04g159690 Amaranthus hybridus HOM05D002003 ORTHO05D002037 6.6e-06 54.7 105 39.0
Hund07425 Selenicereus undatus HOM05D002003 ORTHO05D002037 6.6e-06 54.7 106 38.7
FAN21G0459 Fragaria x ananassa HOM05D002003 ORTHO05D002037 8.7e-06 54.3 114 39.5
QL07p010669 Quercus lobata HOM05D002003 ORTHO05D002037 8.7e-06 54.3 107 41.1
QL07p011228 Quercus lobata HOM05D002003 ORTHO05D002037 8.7e-06 54.3 107 41.1
Hund21964 Selenicereus undatus HOM05D002003 ORTHO05D002037 8.7e-06 54.3 107 40.2


User provided reference genes

Program Settings