Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0343451 Lupinus albus HOM05D003762 ORTHO05D004374 6.0e-132 474.2 236 100.0
arahy.Tifrunner.gnm1.ann1.IN3X4V Arachis hypogaea HOM05D003762 ORTHO05D004374 2.3e-83 312.8 232 65.9
Glyma.18G279200 Glycine max HOM05D003762 ORTHO05D004374 2.3e-83 312.8 231 63.2
arahy.Tifrunner.gnm1.ann1.VKA3KK Arachis hypogaea HOM05D003762 ORTHO05D004374 3.9e-83 312.0 232 65.9
Phvul.008G021700 Phaseolus vulgaris HOM05D003762 ORTHO05D004374 5.1e-83 311.6 231 63.2
VMungo1383G0008 Vigna mungo HOM05D003762 ORTHO05D004374 7.4e-82 307.8 232 62.5
Phvul.010G127200 Phaseolus vulgaris HOM05D003762 ORTHO05D004374 1.7e-73 280.0 233 58.4
Manes.04G114300 Manihot esculenta HOM05D003762 ORTHO05D004374 3.1e-72 275.8 233 54.5
arahy.Tifrunner.gnm1.ann1.RFRX47 Arachis hypogaea HOM05D003762 ORTHO05D004374 1.5e-71 273.5 234 58.1
Nn1g05222 Nelumbo nucifera HOM05D003762 ORTHO05D004374 2.6e-71 272.7 231 56.7
Ca_06841_v3 Cicer arietinum L. HOM05D003762 ORTHO05D004374 3.4e-71 272.3 231 56.7
arahy.Tifrunner.gnm1.ann1.1PQR27 Arachis hypogaea HOM05D003762 ORTHO05D004374 5.9e-71 271.6 234 57.7
Potri.018G000800 Populus trichocarpa HOM05D003762 ORTHO05D004374 5.9e-71 271.6 231 55.8
QL01p011549 Quercus lobata HOM05D003762 ORTHO05D004374 5.9e-71 271.6 230 55.2
Potri.003G033600 Populus trichocarpa HOM05D003762 ORTHO05D004374 7.7e-71 271.2 232 55.6
Sabra01G0002500 Salix brachista HOM05D003762 ORTHO05D004374 6.5e-70 268.1 231 55.4
Potri.001G003700 Populus trichocarpa HOM05D003762 ORTHO05D004374 8.5e-70 267.7 231 55.4
CiPaw.09G152500 Carya illinoinensis HOM05D003762 ORTHO05D004374 5.5e-69 265.0 231 54.1
Ciclev10026399m.g Citrus clementina HOM05D003762 ORTHO05D004374 5.5e-69 265.0 234 54.7
arahy.Tifrunner.gnm1.ann1.3GPH34 Arachis hypogaea HOM05D003762 ORTHO05D004374 7.2e-69 264.6 234 55.6
Glyma.07G041800 Glycine max HOM05D003762 ORTHO05D004374 7.2e-69 264.6 231 55.0
Prupe.5G067300 Prunus persica HOM05D003762 ORTHO05D004374 9.4e-69 264.2 231 54.1
Sed0021000 Sechium edule HOM05D003762 ORTHO05D004374 1.2e-68 263.8 235 51.9
Prupe.1G576300 Prunus persica HOM05D003762 ORTHO05D004374 2.1e-68 263.1 231 54.5
Atru.chr1.3040 Acer truncatum HOM05D003762 ORTHO05D004374 1.8e-67 260.0 231 52.8
Lj1g0002607 Lotus japonicus HOM05D003762 ORTHO05D004374 2.3e-67 259.6 234 54.7
ClCG02G018290 Citrullus lanatus HOM05D003762 ORTHO05D004374 3.0e-67 259.2 231 51.9
TWI56G0980 Tripterygium wilfordii HOM05D003762 ORTHO05D004374 3.9e-67 258.8 231 51.5
Cfa001979 Carpinus fangiana HOM05D003762 ORTHO05D004374 2.0e-66 256.5 232 51.3
Glyma.09G089900 Glycine max HOM05D003762 ORTHO05D004374 2.6e-66 256.1 236 55.9
Psat4g001640 Pisum sativum HOM05D003762 ORTHO05D004374 1.7e-65 253.4 231 52.8
GSVIVG01004444001 Vitis vinifera HOM05D003762 ORTHO05D004374 2.8e-65 252.7 232 52.6
MELO3C014058.2 Cucumis melo HOM05D003762 ORTHO05D004374 8.2e-65 251.1 234 49.1
Cpa.g.sc37.21 Carica papaya HOM05D003762 ORTHO05D004374 1.1e-64 250.8 232 53.0
Cc08_g05300 Coffea canephora HOM05D003762 ORTHO05D004374 1.1e-64 250.8 236 50.4
CsaV3_3G003760 Cucumis sativus L. HOM05D003762 ORTHO05D004374 1.8e-64 250.0 234 49.1
CANSAT35G0296 Cannabis sativa HOM05D003762 ORTHO05D004374 4.1e-64 248.8 231 53.2
ClCG00G001180 Citrullus lanatus HOM05D003762 ORTHO05D004374 1.2e-63 247.3 234 48.3
ClCG10G003800 Citrullus lanatus HOM05D003762 ORTHO05D004374 1.2e-63 247.3 234 48.3
Rhsim05G0080000 Rhododendron simsii HOM05D003762 ORTHO05D004374 1.2e-63 247.3 231 49.8
Thecc.06G021200 Theobroma cacao HOM05D003762 ORTHO05D004374 2.6e-63 246.1 236 52.1
TWI36G0443 Tripterygium wilfordii HOM05D003762 ORTHO05D004374 2.6e-63 246.1 230 48.3
Dinv08128 Davidia involucrata HOM05D003762 ORTHO05D004374 4.5e-63 245.4 230 51.3
Actinidia15994 Actinidia chinensis HOM05D003762 ORTHO05D004374 7.7e-63 244.6 212 53.3
Aqoxy6G02090 Aquilegia oxysepala HOM05D003762 ORTHO05D004374 7.7e-63 244.6 235 52.8
Eucgr.F01771 Eucalyptus grandis HOM05D003762 ORTHO05D004374 1.7e-62 243.4 231 50.2
vmacro11452 Vaccinium macrocarpon HOM05D003762 ORTHO05D004374 2.2e-62 243.0 231 50.2
Duzib160G0900 Durio zibethinus HOM05D003762 ORTHO05D004374 1.1e-61 240.7 236 50.8
MSTRG.11877 Avicennia marina HOM05D003762 ORTHO05D004374 3.2e-61 239.2 229 51.1
CSS0030442 Camellia sinensis var. sinensis HOM05D003762 ORTHO05D004374 4.2e-61 238.8 231 49.4
MD15G1431400 Malus domestica HOM05D003762 ORTHO05D004374 4.2e-61 238.8 200 54.0
GSVIVG01017309001 Vitis vinifera HOM05D003762 ORTHO05D004374 4.2e-61 238.8 225 51.6
CSS0038493 Camellia sinensis var. sinensis HOM05D003762 ORTHO05D004374 5.5e-61 238.4 231 49.8
PGR044G0538 Punica granatum HOM05D003762 ORTHO05D004374 2.7e-60 236.1 234 50.9
VMungo0331G0552 Vigna mungo HOM05D003762 ORTHO05D004374 4.0e-59 232.3 216 53.7
Hma1.2p1_0515F.1_g170140 Hydrangea macrophylla HOM05D003762 ORTHO05D004374 5.2e-59 231.9 228 50.0
Gohir.A02G058000 Gossypium hirsutum HOM05D003762 ORTHO05D004374 6.7e-59 231.5 231 48.9
Eucgr.J01004 Eucalyptus grandis HOM05D003762 ORTHO05D004374 1.1e-58 230.7 226 47.8
Rhsim11G0183700 Rhododendron simsii HOM05D003762 ORTHO05D004374 1.1e-58 230.7 224 49.1
Gorai.005G071700 Gossypium raimondii HOM05D003762 ORTHO05D004374 1.5e-58 230.3 231 48.5
CAN.G812.32 Capsicum annuum HOM05D003762 ORTHO05D004374 4.4e-58 228.8 231 48.5
TPR.G19896 Trifolium pratense HOM05D003762 ORTHO05D004374 7.5e-58 228.0 231 49.4
Gohir.D02G063800 Gossypium hirsutum HOM05D003762 ORTHO05D004374 9.7e-58 227.6 231 48.1
Oeu056611.1 Olea europaea HOM05D003762 ORTHO05D004374 1.3e-57 227.3 229 48.9
PSO455G0078 Papaver somniferum HOM05D003762 ORTHO05D004374 2.2e-57 226.5 232 48.3
ECA246G1447 Erigeron canadensis HOM05D000759 ORTHO05D000574 3.7e-57 225.7 233 47.6
HPP92_015034 Vanilla planifolia HOM05D003762 ORTHO05D004374 3.7e-57 225.7 205 52.2
FAN05G3809 Fragaria x ananassa HOM05D003762 ORTHO05D004374 4.8e-57 225.3 232 49.1
FAN14G5252 Fragaria x ananassa HOM05D003762 ORTHO05D004374 4.8e-57 225.3 232 49.1
Peaxi162Scf00053g00522 Petunia axillaris HOM05D003762 ORTHO05D004374 4.8e-57 225.3 231 47.2
FvH4_6g29950 Fragaria vesca HOM05D003762 ORTHO05D004374 8.2e-57 224.6 232 49.1
FAN09G0714 Fragaria x ananassa HOM05D003762 ORTHO05D004374 1.1e-56 224.2 232 48.7
FAN02G0052 Fragaria x ananassa HOM05D003762 ORTHO05D004374 1.8e-56 223.4 232 48.7
MBI14_g44482_MAGBIO Magnolia biondii HOM05D003762 ORTHO05D004374 2.4e-56 223.0 216 48.1
Sed0000714 Sechium edule HOM05D003762 ORTHO05D004374 2.4e-56 223.0 215 49.3
COL.COLO4_12944 Corchorus olitorius HOM05D003762 ORTHO05D004374 4.1e-56 222.2 237 46.4
Nitab4.5_0000255g0050 Nicotiana tabacum HOM05D003762 ORTHO05D004374 7.0e-56 221.5 230 46.5
Migut.J01128 Erythranthe guttata HOM05D003762 ORTHO05D004374 9.1e-56 221.1 234 47.4
SGA_v2.0_scaffold146G36137 Striga asiatica HOM05D003762 ORTHO05D004374 9.1e-56 221.1 232 45.3
THA.LOC104798921 Tarenaya hassleriana HOM05D003762 ORTHO05D004374 9.1e-56 221.1 234 48.3
Aqoxy6G01949 Aquilegia oxysepala HOM05D003762 ORTHO05D004374 1.6e-55 220.3 235 47.7
PSO170G1737 Papaver somniferum HOM05D003762 ORTHO05D004374 3.5e-55 219.2 235 48.5
Sopen08g024260 Solanum pennellii HOM05D003762 ORTHO05D004374 5.9e-55 218.4 229 47.2
Nitab4.5_0000898g0100 Nicotiana tabacum HOM05D003762 ORTHO05D004374 7.7e-55 218.0 230 45.7
SGA_v2.0_scaffold120G32921 Striga asiatica HOM05D003762 ORTHO05D004374 7.7e-55 218.0 229 45.9
PGSC0003DMG402007612 Solanum tuberosum HOM05D003762 ORTHO05D004374 3.8e-54 215.7 230 47.4
AUR62024643 Chenopodium quinoa HOM05D003762 ORTHO05D004374 1.1e-53 214.2 221 48.9
RcHm_v2.0_Chr6g0271261 Rosa chinensis HOM05D003762 ORTHO05D004374 1.1e-53 214.2 231 47.2
DCAR_002196 Daucus carota HOM05D003762 ORTHO05D004374 1.9e-53 213.4 231 46.3
RcHm_v2.0_Chr2g0135951 Rosa chinensis HOM05D003762 ORTHO05D004374 4.2e-53 212.2 231 47.6
Hund13161 Selenicereus undatus HOM05D003762 ORTHO05D004374 4.2e-53 212.2 232 47.8
RcHm_v2.0_Chr6g0271271 Rosa chinensis HOM05D003762 ORTHO05D004374 1.2e-52 210.7 231 46.8
Lsat_1_v5_gn_3_23460 Lactuca sativa HOM05D003762 ORTHO05D004374 1.6e-52 210.3 224 45.1
DCAR_030901 Daucus carota HOM05D003762 ORTHO05D004374 2.7e-52 209.5 232 45.3
Lj8P331T26 Lonicera japonica HOM05D003762 ORTHO05D004374 2.7e-52 209.5 197 50.8
TPR.G20064 Trifolium pratense HOM05D003762 ORTHO05D004374 2.7e-52 209.5 230 46.1
Ciclev10009494m.g Citrus clementina HOM05D003762 ORTHO05D004374 6.1e-52 208.4 237 46.4
A06p34610 Brassica napus HOM05D003762 ORTHO05D004374 8.0e-52 208.0 234 43.2
BraA06t26389Z Brassica rapa HOM05D003762 ORTHO05D004374 8.0e-52 208.0 234 43.2
C07p43880 Brassica napus HOM05D003762 ORTHO05D004374 1.0e-51 207.6 234 43.2
BcaNung01845 Brassica carinata HOM05D003762 ORTHO05D004374 1.4e-51 207.2 234 43.2
BolC7t44916H Brassica oleracea HOM05D003762 ORTHO05D004374 1.4e-51 207.2 234 43.2
SalBow2G2359 Salvia bowleyana HOM05D003762 ORTHO05D004374 1.4e-51 207.2 238 44.1
Sc24g0003260 Simmondsia chinensis HOM05D003762 ORTHO05D004374 1.2e-50 204.1 238 44.1
Carub.0006s2146 Capsella rubella HOM05D003762 ORTHO05D004374 1.5e-50 203.8 234 43.6
Haze_16536 Corylus avellana HOM05D003762 ORTHO05D004374 2.0e-50 203.4 201 48.8
Ah.03g133930 Amaranthus hybridus HOM05D003762 ORTHO05D004374 2.6e-50 203.0 235 45.5
HanXRQChr17g0537091 Helianthus annuus HOM05D003762 ORTHO05D004374 2.6e-50 203.0 201 48.3
ECA240G1229 Erigeron canadensis HOM05D003762 ORTHO05D004374 4.4e-50 202.2 231 45.9
Sp2g23520 Schrenkiella parvula HOM05D003762 ORTHO05D004374 4.4e-50 202.2 234 41.5
TAR625G0731 Trochodendron aralioides HOM05D003762 ORTHO05D004374 5.7e-50 201.8 189 51.9
Aa31sc38G110 Aethionema arabicum HOM05D003762 ORTHO05D004374 1.7e-49 200.3 233 42.1
AT5G23710 Arabidopsis thaliana HOM05D003762 ORTHO05D004374 1.7e-49 200.3 234 43.6
Thhalv10005351m.g Eutrema salsugineum HOM05D003762 ORTHO05D004374 6.3e-49 198.4 235 42.1
Aa31LG11G3050 Aethionema arabicum HOM05D003762 ORTHO05D004374 1.1e-48 197.6 234 41.9
AL6G34980 Arabidopsis lyrata HOM05D003762 ORTHO05D004374 1.1e-48 197.6 234 41.5
PGSC0003DMG400003846 Solanum tuberosum HOM05D003762 ORTHO05D004374 4.1e-48 195.7 232 44.8
ATR0580G255 Amborella trichopoda HOM05D003762 ORTHO05D004374 7.0e-48 194.9 220 43.2
Medtr7g109780 Medicago truncatula HOM05D003762 ORTHO05D004374 7.0e-48 194.9 194 49.0
CARHR189840 Cardamine hirsuta HOM05D003762 ORTHO05D004374 1.3e-46 190.7 235 41.7
Peaxi162Scf00573g00044 Petunia axillaris HOM05D003762 ORTHO05D004374 6.5e-46 188.3 225 43.1
QL03p059502 Quercus lobata HOM05D003762 ORTHO05D004374 8.5e-46 188.0 231 41.1
HanXRQChr03g0081311 Helianthus annuus HOM05D003762 ORTHO05D004374 4.2e-45 185.7 237 42.6
Zm00001eb276730 Zea mays HOM05D003762 ORTHO05D004374 5.5e-45 185.3 217 42.4
BolC9t53671H Brassica oleracea HOM05D003762 ORTHO05D004374 7.2e-45 184.9 232 40.9
FAN09G1243 Fragaria x ananassa HOM05D003762 ORTHO05D004374 7.2e-45 184.9 232 43.5
Medtr0003s0690 Medicago truncatula HOM05D003762 ORTHO05D004374 2.1e-44 183.3 178 49.4
Zm00001eb386260 Zea mays HOM05D003762 ORTHO05D004374 8.0e-44 181.4 226 40.7
BcaC04g23509 Brassica carinata HOM05D003762 ORTHO05D004374 1.8e-43 180.3 229 39.7
HPP92_015113 Vanilla planifolia HOM05D003762 ORTHO05D004374 2.3e-43 179.9 154 52.6
Mapoly0090s0008 Marchantia polymorpha HOM05D003762 ORTHO05D004374 4.0e-43 179.1 217 40.6
Atru.chr1.3022 Acer truncatum HOM05D003762 ORTHO05D004374 1.2e-42 177.6 154 50.0
CAN.G2872.1 Capsicum annuum HOM05D003762 ORTHO05D004374 4.4e-42 175.6 202 45.5
CAN.G1683.1 Capsicum annuum HOM05D003762 ORTHO05D004374 7.5e-42 174.9 202 45.5
MELO3C007348.2 Cucumis melo HOM05D003762 ORTHO05D004374 9.8e-42 174.5 186 43.5
Pp3c22_6800 Physcomitrium patens HOM05D003762 ORTHO05D004374 1.7e-41 173.7 230 37.4
AagrBONN_evm.TU.Sc2ySwM_228.1250 Anthoceros agrestis HOM05D003762 ORTHO05D004374 2.2e-41 173.3 218 40.8
TAR636G2311 Trochodendron aralioides HOM05D003762 ORTHO05D004374 2.2e-41 173.3 154 51.3
BraA09t36329Z Brassica rapa HOM05D003762 ORTHO05D004374 1.1e-40 171.0 222 40.1
C09p07550 Brassica napus HOM05D003762 ORTHO05D004374 1.6e-39 167.2 232 38.8
A09p06830 Brassica napus HOM05D003762 ORTHO05D004374 3.5e-39 166.0 232 38.4
PSO455G0143 Papaver somniferum HOM05D003762 ORTHO05D004374 3.5e-39 166.0 231 41.6
BcaB04g19852 Brassica carinata HOM05D003762 ORTHO05D004374 1.3e-38 164.1 232 38.4
BcaB04g19853 Brassica carinata HOM05D003762 ORTHO05D004374 1.3e-38 164.1 232 38.4
vmacro16904 Vaccinium macrocarpon HOM05D003762 ORTHO05D004374 8.6e-38 161.4 165 45.5
Cre07.g314950 Chlamydomonas reinhardtii HOM05D003762 ORTHO05D004374 1.1e-37 161.0 217 36.4
Solyc08g075580.3 Solanum lycopersicum HOM05D003762 ORTHO05D004374 1.5e-37 160.6 152 50.0
Oeu056610.1 Olea europaea HOM05D003762 ORTHO05D004374 3.3e-37 159.5 147 51.0
Lsat_1_v5_gn_3_23440 Lactuca sativa HOM05D003762 ORTHO05D004374 5.6e-37 158.7 183 43.2
unitig_0.g2831 Utricularia gibba HOM05D003762 ORTHO05D004374 3.6e-36 156.0 239 36.0
VMungo0720G1683 Vigna mungo HOM05D003762 ORTHO05D004374 1.4e-35 154.1 139 53.2
Zm00001eb356740 Zea mays HOM05D003762 ORTHO05D004374 2.9e-33 146.4 195 40.0
Rhsim12G0192200 Rhododendron simsii HOM05D003762 ORTHO05D004374 6.4e-33 145.2 145 48.3
FAN02G2701 Fragaria x ananassa HOM05D003762 ORTHO05D004374 1.4e-32 144.1 210 41.0
MCO15G473 Micromonas commoda HOM05D003762 ORTHO05D004374 2.4e-32 143.3 227 34.8
Oeu039594.1 Olea europaea HOM05D003762 ORTHO05D004374 1.6e-31 140.6 162 45.7
Atru.chr1.3024 Acer truncatum HOM05D003762 ORTHO05D004374 1.6e-28 130.6 115 54.8
QL06p036898 Quercus lobata HOM05D003762 ORTHO05D004374 3.6e-28 129.4 151 44.4
MD08G1239800 Malus domestica HOM05D003762 ORTHO05D004374 8.0e-28 128.3 115 52.2
FAN05G0849 Fragaria x ananassa HOM05D003762 ORTHO05D004374 7.5e-26 121.7 200 38.5
AUR62011796 Chenopodium quinoa HOM05D003762 ORTHO05D004374 1.7e-22 110.5 108 50.9
FAN14G0588 Fragaria x ananassa HOM05D003762 ORTHO05D004374 3.9e-22 109.4 128 46.9
FvH4_6g41460 Fragaria vesca HOM05D003762 ORTHO05D004374 1.5e-21 107.5 124 47.6
vmacro18986 Vaccinium macrocarpon HOM05D003762 ORTHO05D004374 5.6e-21 105.5 202 34.2
HanXRQChr03g0081131 Helianthus annuus HOM05D003762 ORTHO05D004374 1.3e-17 94.4 81 55.6
Nn1g05046 Nelumbo nucifera HOM05D002280 ORTHO05D002322 1.7e-17 94.0 89 50.6
Nitab4.5_0009310g0060 Nicotiana tabacum HOM05D003762 ORTHO05D004374 8.3e-17 91.7 92 42.4
Potri.003G221301 Populus trichocarpa HOM05D003762 ORTHO05D004374 8.3e-17 91.7 107 44.9
PRCOL_00004812 Prasinoderma coloniale HOM05D003762 ORTHO05D004374 1.4e-16 90.9 151 32.5
Aqoxy6G01956 Aquilegia oxysepala HOM05D003762 ORTHO05D004374 5.4e-16 89.0 92 46.7
QL05p029016 Quercus lobata HOM05D003762 ORTHO05D004374 2.7e-15 86.7 88 45.5
VMungo1383G0391 Vigna mungo HOM05D003762 ORTHO05D004374 6.0e-15 85.5 104 41.3
SEGI_04069 Sequoiadendron giganteum HOM05D003762 ORTHO05D004374 7.8e-15 85.1 80 47.5
Atru.chr1.3033 Acer truncatum HOM05D003762 ORTHO05D004374 1.1e-13 81.3 78 46.2
PSO384G2135 Papaver somniferum HOM05D003762 ORTHO05D004374 4.7e-12 75.9 89 39.3
PSO384G3622 Papaver somniferum HOM05D003762 ORTHO05D004374 4.7e-12 75.9 89 39.3
Os06g0603400 Oryza sativa ssp. japonica HOM05D003762 ORTHO05D004374 2.3e-11 73.6 54 61.1
Nitab4.5_0009310g0070 Nicotiana tabacum HOM05D003419 ORTHO05D004374 2.6e-10 70.1 93 44.1
SEGI_04929 Sequoiadendron giganteum HOM05D003762 ORTHO05D004374 6.4e-09 65.5 78 37.2
TAR636G2069 Trochodendron aralioides HOM05D003762 ORTHO05D004374 1.2e-07 61.2 58 50.0
Medtr7g109760 Medicago truncatula HOM05D003762 ORTHO05D004374 3.9e-06 56.2 155 29.0


User provided reference genes

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