Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0338581 Lupinus albus HOM05D003921 ORTHO05D004394 5.9e-137 491.1 296 100.0
Lalb_Chr10g0096111 Lupinus albus HOM05D003921 ORTHO05D004394 2.1e-118 429.5 297 80.1
Cfa018157 Carpinus fangiana HOM05D003921 ORTHO05D004394 3.5e-89 332.4 301 65.4
Haze_17961 Corylus avellana HOM05D003921 ORTHO05D004394 3.5e-89 332.4 301 65.1
Glyma.10G154500 Glycine max HOM05D003921 ORTHO05D004394 4.0e-85 318.9 241 73.9
Hma1.2p1_0654F.1_g196410 Hydrangea macrophylla HOM05D003921 ORTHO05D004394 1.2e-84 317.4 295 63.7
Cpa.g.sc3.273 Carica papaya HOM05D003921 ORTHO05D004394 5.8e-84 315.1 283 65.0
Potri.015G131200 Populus trichocarpa HOM05D003921 ORTHO05D004394 2.2e-83 313.2 287 63.8
arahy.Tifrunner.gnm1.ann1.HSUB65 Arachis hypogaea HOM05D003921 ORTHO05D004394 1.1e-82 310.8 276 65.6
Thecc.03G161300 Theobroma cacao HOM05D003921 ORTHO05D004394 4.2e-82 308.9 300 59.0
Dinv22928 Davidia involucrata HOM05D003921 ORTHO05D004394 1.2e-81 307.4 303 62.4
Lj3g0006890 Lotus japonicus HOM05D003921 ORTHO05D004394 3.5e-81 305.8 292 61.6
TPR.G19495 Trifolium pratense HOM05D002828 ORTHO05D003457 3.0e-80 302.8 287 61.0
Gohir.D07G043600 Gossypium hirsutum HOM05D003921 ORTHO05D004394 4.8e-78 295.4 299 59.2
Rhsim11G0028600 Rhododendron simsii HOM05D003921 ORTHO05D004394 6.2e-78 295.0 290 61.0
Lalb_Chr06g0167921 Lupinus albus HOM05D003921 ORTHO05D004394 8.1e-78 294.7 250 67.6
Gorai.001G046600 Gossypium raimondii HOM05D003921 ORTHO05D004394 1.1e-77 294.3 299 58.9
Gohir.A07G039500 Gossypium hirsutum HOM05D003921 ORTHO05D004394 2.4e-77 293.1 299 58.5
vmacro18851 Vaccinium macrocarpon HOM05D003921 ORTHO05D004394 1.2e-76 290.8 288 60.4
MBI05_g15474_MAGBIO Magnolia biondii HOM05D003921 ORTHO05D004394 1.5e-76 290.4 301 58.8
CANSAT11G2317 Cannabis sativa HOM05D003921 ORTHO05D004394 5.8e-76 288.5 258 64.3
Rhsim07G0193400 Rhododendron simsii HOM05D003921 ORTHO05D004394 5.8e-76 288.5 231 72.3
TPR.G27266 Trifolium pratense HOM05D003921 ORTHO05D004394 5.8e-76 288.5 291 59.1
Glyma.20G233800 Glycine max HOM05D003921 ORTHO05D004394 1.3e-75 287.3 245 66.1
TAR636G2246 Trochodendron aralioides HOM05D003921 ORTHO05D004394 3.8e-75 285.8 304 56.6
Migut.J00413 Erythranthe guttata HOM05D003921 ORTHO05D004394 1.4e-74 283.9 245 66.9
CSS0023430 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 5.5e-74 282.0 245 67.8
Ca_20760_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 9.3e-74 281.2 291 59.8
CDE07G0272 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 2.1e-73 280.0 282 58.2
QL02p008779 Quercus lobata HOM05D003921 ORTHO05D004394 3.5e-73 279.3 297 56.9
Aa31LG5G22190 Aethionema arabicum HOM05D003921 ORTHO05D004394 7.9e-73 278.1 250 62.4
Phvul.007G180200 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 7.9e-73 278.1 282 58.2
Ca_31306_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 1.0e-72 277.7 289 59.5
COL.COLO4_14179 Corchorus olitorius HOM05D003921 ORTHO05D004394 2.5e-71 273.1 265 60.4
Manes.06G137800 Manihot esculenta HOM05D003921 ORTHO05D004394 3.3e-71 272.7 288 57.3
Duzib084G0641 Durio zibethinus HOM05D003921 ORTHO05D004394 4.3e-71 272.3 301 54.8
Aa31LG5G22200 Aethionema arabicum HOM05D003921 ORTHO05D004394 2.8e-70 269.6 250 62.8
Phvul.007G264700 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 2.8e-70 269.6 282 56.7
Ca_25165_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 4.0e-69 265.8 291 63.6
TWI14G0513 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 2.6e-68 263.1 305 56.7
Medtr5g028350 Medicago truncatula HOM05D003921 ORTHO05D004394 5.8e-68 261.9 281 59.4
RcHm_v2.0_Chr1g0375101 Rosa chinensis HOM05D003921 ORTHO05D004394 5.8e-68 261.9 262 60.3
MELO3C005417.2 Cucumis melo HOM05D003921 ORTHO05D004394 7.6e-68 261.5 305 56.4
Sed0026547 Sechium edule HOM05D003921 ORTHO05D004394 7.6e-68 261.5 306 54.6
ClCG01G005120 Citrullus lanatus HOM05D003921 ORTHO05D004394 1.3e-67 260.8 300 56.0
PGR042G0045 Punica granatum HOM05D003921 ORTHO05D004394 2.9e-67 259.6 297 54.9
Sed0011284 Sechium edule HOM05D003921 ORTHO05D004394 2.9e-67 259.6 303 56.1
Eucgr.E01709 Eucalyptus grandis HOM05D003921 ORTHO05D004394 3.8e-67 259.2 303 54.5
Psat2g139240 Pisum sativum HOM05D003921 ORTHO05D004394 4.9e-67 258.8 291 61.9
Solyc01g006170.4 Solanum lycopersicum HOM05D003921 ORTHO05D004394 4.9e-67 258.8 266 58.3
AT3G22660 Arabidopsis thaliana HOM05D003921 ORTHO05D004394 1.4e-66 257.3 222 63.1
Solyc01g006090.3 Solanum lycopersicum HOM05D003921 ORTHO05D004394 1.4e-66 257.3 250 58.8
Sopen01g002180 Solanum pennellii HOM05D003921 ORTHO05D004394 1.4e-66 257.3 247 61.5
PGSC0003DMG400032141 Solanum tuberosum HOM05D003921 ORTHO05D004394 1.4e-66 257.3 231 62.3
TWI23G0331 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 1.4e-66 257.3 304 54.9
VMungo0720G1998 Vigna mungo HOM05D003921 ORTHO05D004394 3.2e-66 256.1 259 57.1
Cc02_g03920 Coffea canephora HOM05D003921 ORTHO05D004394 4.2e-66 255.8 253 61.3
CsaV3_5G005400 Cucumis sativus L. HOM05D003921 ORTHO05D004394 7.1e-66 255.0 313 54.6
Dinv22984 Davidia involucrata HOM05D003921 ORTHO05D004394 7.1e-66 255.0 303 55.1
PGSC0003DMG400032192 Solanum tuberosum HOM05D003921 ORTHO05D004394 7.1e-66 255.0 247 61.1
CiPaw.15G078700 Carya illinoinensis HOM05D003921 ORTHO05D004394 9.3e-66 254.6 302 54.0
Lj1P984T37 Lonicera japonica HOM05D003921 ORTHO05D004394 9.3e-66 254.6 263 57.8
CSS0011813 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 2.1e-65 253.4 269 61.7
Prupe.2G282000 Prunus persica HOM05D003921 ORTHO05D004394 2.1e-65 253.4 298 54.7
TAR626G1747 Trochodendron aralioides HOM05D003921 ORTHO05D004394 2.7e-65 253.1 288 55.2
Lsat_1_v5_gn_6_96180 Lactuca sativa HOM05D003921 ORTHO05D004394 6.0e-65 251.9 201 67.2
Sc03g0002240 Simmondsia chinensis HOM05D003921 ORTHO05D004394 6.0e-65 251.9 246 58.5
Aqoxy1G01610 Aquilegia oxysepala HOM05D003921 ORTHO05D004394 7.9e-65 251.5 286 53.5
SGA_v2.0_scaffold126G33894 Striga asiatica HOM05D003921 ORTHO05D004394 1.8e-64 250.4 296 55.4
A01p32500 Brassica napus HOM05D003921 ORTHO05D004394 2.3e-64 250.0 250 59.2
CSS0049059 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 3.0e-64 249.6 265 58.9
Carub.0003s2281 Capsella rubella HOM05D003921 ORTHO05D004394 3.0e-64 249.6 247 58.3
FAN01G0440 Fragaria x ananassa HOM05D003921 ORTHO05D004394 5.1e-64 248.8 219 63.5
Atru.chr1.637 Acer truncatum HOM05D003921 ORTHO05D004394 6.7e-64 248.4 304 51.6
BcaB06g26378 Brassica carinata HOM05D003921 ORTHO05D004394 8.7e-64 248.1 249 59.0
BraA05t21488Z Brassica rapa HOM05D003921 ORTHO05D004394 1.5e-63 247.3 249 58.2
FvH4_7g28160 Fragaria vesca HOM05D003921 ORTHO05D004394 1.5e-63 247.3 219 63.0
FAN06G2146 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.9e-63 246.9 219 63.0
FAN06G4038 Fragaria x ananassa HOM05D003921 ORTHO05D004394 2.5e-63 246.5 219 63.0
ATR0626G386 Amborella trichopoda HOM05D003921 ORTHO05D004394 3.3e-63 246.1 287 51.6
AL3G36960 Arabidopsis lyrata HOM05D003921 ORTHO05D004394 3.3e-63 246.1 247 57.5
BraA03t13433Z Brassica rapa HOM05D003921 ORTHO05D004394 3.3e-63 246.1 252 58.3
HanXRQChr08g0224051 Helianthus annuus HOM05D003921 ORTHO05D004394 4.3e-63 245.7 263 56.3
THA.LOC104808294 Tarenaya hassleriana HOM05D003921 ORTHO05D004394 4.3e-63 245.7 244 61.9
Medtr8g075400 Medicago truncatula HOM05D003921 ORTHO05D004394 5.7e-63 245.4 239 62.3
EL10Ac4g09457 Beta vulgaris HOM05D003921 ORTHO05D004394 7.4e-63 245.0 251 59.8
BraA01t03380Z Brassica rapa HOM05D003921 ORTHO05D004394 7.4e-63 245.0 250 58.4
FAN03G1144 Fragaria x ananassa HOM05D003921 ORTHO05D004394 7.4e-63 245.0 219 62.6
FAN03G3435 Fragaria x ananassa HOM05D003921 ORTHO05D004394 7.4e-63 245.0 219 62.6
Ciclev10005521m.g Citrus clementina HOM05D003921 ORTHO05D004394 9.6e-63 244.6 261 56.3
A05p26040 Brassica napus HOM05D003921 ORTHO05D004394 1.3e-62 244.2 254 58.3
FAN10G0634 Fragaria x ananassa HOM05D003921 ORTHO05D004394 2.8e-62 243.0 262 57.6
Sp3g20420 Schrenkiella parvula HOM05D003921 ORTHO05D004394 3.7e-62 242.7 217 61.3
A03p42870 Brassica napus HOM05D003921 ORTHO05D004394 4.8e-62 242.3 251 59.8
Thhalv10021245m.g Eutrema salsugineum HOM05D003921 ORTHO05D004394 8.2e-62 241.5 249 59.4
Nitab4.5_0005477g0070 Nicotiana tabacum HOM05D003921 ORTHO05D004394 8.2e-62 241.5 258 56.2
MD01G1185600 Malus domestica HOM05D003921 ORTHO05D004394 1.4e-61 240.7 282 53.5
C03p52650 Brassica napus HOM05D003921 ORTHO05D004394 2.4e-61 240.0 222 62.6
BcaC01g03432 Brassica carinata HOM05D003921 ORTHO05D004394 3.1e-61 239.6 222 62.6
BcaB04g19210 Brassica carinata HOM05D003921 ORTHO05D004394 4.1e-61 239.2 218 61.9
BcaB04g20506 Brassica carinata HOM05D003921 ORTHO05D004394 4.1e-61 239.2 251 59.8
Nitab4.5_0001620g0040 Nicotiana tabacum HOM05D003921 ORTHO05D004394 5.3e-61 238.8 227 59.9
Rhsim11G0028700 Rhododendron simsii HOM05D003921 ORTHO05D004394 1.5e-60 237.3 290 54.1
HanXRQChr05g0141401 Helianthus annuus HOM05D003921 ORTHO05D004394 1.3e-59 234.2 263 54.4
Peaxi162Scf00441g00013 Petunia axillaris HOM05D003921 ORTHO05D004394 1.7e-59 233.8 243 58.8
MD07G1257700 Malus domestica HOM05D003921 ORTHO05D004394 2.9e-59 233.0 283 54.1
BolC3t17533H Brassica oleracea HOM05D003921 ORTHO05D004394 2.5e-58 229.9 222 59.5
unitig_744.g24672 Utricularia gibba HOM05D003921 ORTHO05D004394 3.2e-58 229.6 237 57.4
BcaC09g49188 Brassica carinata HOM05D003921 ORTHO05D004394 7.2e-58 228.4 251 55.0
C01p41660 Brassica napus HOM05D003921 ORTHO05D004394 7.2e-58 228.4 251 55.0
BolC1t04121H Brassica oleracea HOM05D003921 ORTHO05D004394 7.2e-58 228.4 251 55.0
ECA234G0656 Erigeron canadensis HOM05D003921 ORTHO05D004394 9.3e-58 228.0 263 51.7
PSO782G4293 Papaver somniferum HOM05D003921 ORTHO05D004394 3.9e-56 222.6 291 48.5
PSO478G1412 Papaver somniferum HOM05D003921 ORTHO05D004394 6.7e-56 221.9 294 48.0
DCAR_020219 Daucus carota HOM05D003921 ORTHO05D004394 8.7e-56 221.5 283 49.8
FAN10G0556 Fragaria x ananassa HOM05D003921 ORTHO05D004394 7.4e-55 218.4 217 58.5
Ah.06g188120 Amaranthus hybridus HOM05D003921 ORTHO05D004394 1.1e-53 214.5 297 48.5
Ah.06g188100 Amaranthus hybridus HOM05D003921 ORTHO05D004394 2.4e-53 213.4 290 49.0
CDE04G0151 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 6.9e-53 211.8 208 57.7
AUR62000393 Chenopodium quinoa HOM05D003921 ORTHO05D004394 6.5e-51 205.3 229 51.5
Os07g0475800 Oryza sativa ssp. japonica HOM05D003921 ORTHO05D004394 1.9e-50 203.8 198 57.1
Ah.06g188150 Amaranthus hybridus HOM05D003921 ORTHO05D004394 7.2e-50 201.8 246 50.4
BcaC05g28029 Brassica carinata HOM05D003921 ORTHO05D004394 9.4e-50 201.4 249 51.4
BolC5t32786H Brassica oleracea HOM05D003921 ORTHO05D004394 9.4e-50 201.4 249 51.4
Pp3c6_25210 Physcomitrium patens HOM05D003921 ORTHO05D004394 3.6e-49 199.5 231 50.2
ECA233G5254 Erigeron canadensis HOM05D003921 ORTHO05D004394 7.9e-49 198.4 239 51.9
CAN.G140.50 Capsicum annuum HOM05D003921 ORTHO05D004394 1.5e-47 194.1 248 54.0
AUR62006749 Chenopodium quinoa HOM05D003921 ORTHO05D004394 4.4e-47 192.6 290 45.9
Zm00001eb235000 Zea mays HOM05D003921 ORTHO05D004394 4.4e-47 192.6 282 45.7
SMO174G0035 Selaginella moellendorffii HOM05D003921 ORTHO05D004394 1.3e-46 191.0 215 52.1
Zm00001eb104900 Zea mays HOM05D003921 ORTHO05D004394 1.7e-46 190.7 250 46.8
CARHR098540 Cardamine hirsuta HOM05D003921 ORTHO05D004394 2.8e-46 189.9 248 48.0
Nitab4.5_0000249g0460 Nicotiana tabacum HOM05D003921 ORTHO05D004394 2.6e-44 183.3 249 51.0
Sopen01g002090 Solanum pennellii HOM05D003921 ORTHO05D004394 4.5e-44 182.6 168 63.7
SHI13875 Sapria himalayana HOM05D003921 ORTHO05D004394 1.3e-43 181.0 214 51.9
Nn1g08099 Nelumbo nucifera HOM05D003921 ORTHO05D004394 8.5e-43 178.3 155 63.2
Mapoly0140s0011 Marchantia polymorpha HOM05D003921 ORTHO05D004394 5.5e-42 175.6 190 55.8
Ciclev10006627m.g Citrus clementina HOM05D003921 ORTHO05D004394 7.9e-41 171.8 303 41.3
Nn1g01220 Nelumbo nucifera HOM05D003921 ORTHO05D004394 7.9e-41 171.8 156 61.5
MSTRG.14093 Avicennia marina HOM05D003921 ORTHO05D004394 3.0e-40 169.9 148 63.5
Ah.06g188070 Amaranthus hybridus HOM05D003921 ORTHO05D004394 2.0e-39 167.2 190 54.7
Oeu019922.1 Olea europaea HOM05D003921 ORTHO05D004394 9.7e-39 164.9 207 51.2
DCAR_018123 Daucus carota HOM05D003921 ORTHO05D004394 1.3e-38 164.5 152 57.9
Nitab4.5_0004389g0020 Nicotiana tabacum HOM05D003921 ORTHO05D004394 1.4e-37 161.0 243 44.9
AagrBONN_evm.TU.Sc2ySwM_228.1082 Anthoceros agrestis HOM05D003921 ORTHO05D004394 2.4e-37 160.2 196 49.0
HPP92_008700 Vanilla planifolia HOM05D003921 ORTHO05D004394 1.2e-36 157.9 137 56.9
Eucgr.K01460 Eucalyptus grandis HOM05D003921 ORTHO05D004394 6.5e-35 152.1 151 55.6
BcaC09g49189 Brassica carinata HOM05D003921 ORTHO05D004394 6.7e-32 142.1 184 47.3
MSTRG.14095 Avicennia marina HOM05D003921 ORTHO05D004394 8.8e-32 141.7 129 65.1
RcHm_v2.0_Chr5g0027461 Rosa chinensis HOM05D003921 ORTHO05D017011 1.7e-30 137.5 146 50.0
Oeu019920.1 Olea europaea HOM05D003921 ORTHO05D004394 3.1e-29 133.3 275 43.3
Ca_27419_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 4.1e-29 132.9 181 50.3
Oeu021724.1 Olea europaea HOM05D003921 ORTHO05D004394 5.3e-29 132.5 282 38.3
PRCOL_00003036 Prasinoderma coloniale HOM05D003921 ORTHO05D004394 1.0e-27 128.3 198 39.4
Hund09280 Selenicereus undatus HOM05D003921 ORTHO05D004394 6.5e-27 125.6 132 56.1
Hund09282 Selenicereus undatus HOM05D003921 ORTHO05D004394 6.5e-27 125.6 132 56.1
CBR_g18581 Chara braunii HOM05D001161 ORTHO05D000497 3.2e-26 123.2 261 39.1
Nn4g26407 Nelumbo nucifera HOM05D003921 ORTHO05D004394 3.2e-26 123.2 127 57.5
MCO16G303 Micromonas commoda HOM05D003921 ORTHO05D004394 5.5e-26 122.5 165 44.8
Actinidia25037 Actinidia chinensis HOM05D003921 ORTHO05D004394 3.4e-23 113.2 102 59.8
Cre07.g351750 Chlamydomonas reinhardtii HOM05D003921 ORTHO05D004394 3.4e-23 113.2 208 39.9
Actinidia31394 Actinidia chinensis HOM05D003921 ORTHO05D004394 2.2e-22 110.5 90 72.2
GSVIVG01018514001 Vitis vinifera HOM05D003921 ORTHO05D004394 3.7e-22 109.8 289 36.3
Actinidia39598 Actinidia chinensis HOM05D003921 ORTHO05D004394 4.5e-20 102.8 110 59.1
Actinidia13554 Actinidia chinensis HOM05D003921 ORTHO05D004394 1.3e-19 101.3 72 72.2
MSTRG.5717 Avicennia marina HOM05D003921 ORTHO05D004394 1.3e-19 101.3 151 47.7
Oeu023230.1 Olea europaea HOM05D003921 ORTHO05D004394 1.7e-19 100.9 278 32.7
CDE08G0595 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 4.7e-17 92.8 110 51.8
Nn4g26401 Nelumbo nucifera HOM05D003921 ORTHO05D004394 1.4e-13 81.3 95 52.6
ATR0564G120 Amborella trichopoda HOM05D003921 ORTHO05D004394 5.0e-11 72.8 165 37.6
Gohir.D12G264333 Gossypium hirsutum HOM05D003921 ORTHO05D004394 6.6e-11 72.4 221 32.6
Dinv10307 Davidia involucrata HOM05D003921 ORTHO05D004394 8.6e-11 72.0 48 72.9
Oeu039213.1 Olea europaea HOM05D003921 ORTHO05D004394 2.5e-10 70.5 73 58.9
Gorai.008G283700 Gossypium raimondii HOM05D003921 ORTHO05D004394 7.3e-10 68.9 216 31.9
Ca_29708_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 3.6e-09 66.6 82 50.0
Ah.06g188140 Amaranthus hybridus HOM05D003921 ORTHO05D004394 2.6e-07 60.5 117 38.5
Prupe.2G115300 Prunus persica HOM05D003921 ORTHO05D004394 4.4e-07 59.7 217 28.6
FvH4_1g22470 Fragaria vesca HOM05D003475 ORTHO05D035452 7.5e-07 58.9 60 51.7


User provided reference genes

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