Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0338451 Lupinus albus HOM05D006460 ORTHO05D008143 1.8e-303 1045.0 508 100.0
VMungo1215G1636 Vigna mungo HOM05D006460 ORTHO05D008143 4.3e-220 768.1 459 81.5
Phvul.003G019300 Phaseolus vulgaris HOM05D006460 ORTHO05D008143 5.3e-218 761.1 460 80.9
Ca_12543_v3 Cicer arietinum L. HOM05D006460 ORTHO05D008143 1.7e-216 756.1 459 80.0
Lj2g0013221 Lotus japonicus HOM05D006460 ORTHO05D008143 6.4e-216 754.2 461 79.2
Glyma.07G170000 Glycine max HOM05D006460 ORTHO05D008143 2.3e-213 745.7 459 79.5
Psat6g046360 Pisum sativum HOM05D006460 ORTHO05D008143 1.4e-210 736.5 459 77.8
TPR.G36866 Trifolium pratense HOM05D006460 ORTHO05D008143 3.4e-209 731.9 494 73.5
Medtr1g032120 Medicago truncatula HOM05D006460 ORTHO05D008143 6.4e-208 727.6 459 77.1
arahy.Tifrunner.gnm1.ann1.N25L3F Arachis hypogaea HOM05D006460 ORTHO05D008143 2.3e-205 719.2 486 73.0
arahy.Tifrunner.gnm1.ann1.R72PZK Arachis hypogaea HOM05D006460 ORTHO05D008143 2.1e-203 712.6 493 72.0
Potri.002G189800 Populus trichocarpa HOM05D006460 ORTHO05D008143 2.6e-180 636.0 463 66.3
Sabra02G0165800 Salix brachista HOM05D006460 ORTHO05D008143 4.4e-180 635.2 463 65.9
QL12p034319 Quercus lobata HOM05D006460 ORTHO05D008143 1.7e-179 633.3 467 65.5
Prupe.3G004500 Prunus persica HOM05D006460 ORTHO05D008143 2.4e-178 629.4 465 65.8
Duzib138G1376 Durio zibethinus HOM05D006460 ORTHO05D008143 2.2e-176 622.9 456 66.2
Haze_05122 Corylus avellana HOM05D006460 ORTHO05D008143 6.5e-176 621.3 465 65.8
CiPaw.04G089700 Carya illinoinensis HOM05D006460 ORTHO05D008143 1.6e-174 616.7 460 66.1
Eucgr.H00886 Eucalyptus grandis HOM05D006460 ORTHO05D008143 1.5e-172 610.1 456 66.2
Ciclev10001046m.g Citrus clementina HOM05D006460 ORTHO05D008143 2.0e-172 609.8 461 65.3
Atru.chr5.915 Acer truncatum HOM05D006460 ORTHO05D008143 7.4e-172 607.8 456 65.1
MD09G1293200 Malus domestica HOM05D006460 ORTHO05D008143 8.2e-171 604.4 464 63.6
Gorai.001G146600 Gossypium raimondii HOM05D006460 ORTHO05D008143 7.0e-170 601.3 463 62.6
Gohir.D07G134900 Gossypium hirsutum HOM05D006460 ORTHO05D008143 2.0e-169 599.7 463 62.4
COL.COLO4_23162 Corchorus olitorius HOM05D006460 ORTHO05D008143 1.7e-168 596.7 456 64.3
FvH4_1g26500 Fragaria vesca HOM05D006460 ORTHO05D008143 5.0e-168 595.1 472 61.2
CANSAT56G1882 Cannabis sativa HOM05D006460 ORTHO05D008143 4.2e-167 592.0 469 62.9
GSVIVG01028196001 Vitis vinifera HOM05D006460 ORTHO05D008143 2.7e-166 589.3 458 63.1
RcHm_v2.0_Chr3g0486571 Rosa chinensis HOM05D006460 ORTHO05D008143 4.0e-165 585.5 471 61.4
FAN28G1427 Fragaria x ananassa HOM05D006460 ORTHO05D008143 6.7e-165 584.7 472 60.6
TWI14G0400 Tripterygium wilfordii HOM05D006460 ORTHO05D008143 2.0e-164 583.2 457 63.0
TAR362G0080 Trochodendron aralioides HOM05D006460 ORTHO05D008143 3.3e-164 582.4 470 62.3
Sc17g0000180 Simmondsia chinensis HOM05D006460 ORTHO05D008143 5.7e-164 581.6 457 61.7
Manes.05G010900 Manihot esculenta HOM05D006460 ORTHO05D008143 1.3e-163 580.5 458 62.2
Sed0027463 Sechium edule HOM05D006460 ORTHO05D008143 1.1e-162 577.4 456 62.5
Nn4g25417 Nelumbo nucifera HOM05D006460 ORTHO05D008143 3.1e-162 575.9 476 60.3
PGR083G0788 Punica granatum HOM05D006460 ORTHO05D008143 2.0e-161 573.2 462 62.6
Actinidia21358 Actinidia chinensis HOM05D006460 ORTHO05D008143 8.5e-160 567.8 474 61.6
Thecc.01G322200 Theobroma cacao HOM05D006460 ORTHO05D008143 8.5e-160 567.8 461 62.7
Cpa.g.sc543.2 Carica papaya HOM05D006460 ORTHO05D008143 1.1e-159 567.4 465 60.6
vmacro02372 Vaccinium macrocarpon HOM05D006460 ORTHO05D008143 1.2e-158 563.9 525 56.4
Lj1C11T12 Lonicera japonica HOM05D006460 ORTHO05D008143 1.4e-157 560.5 468 60.0
ClCG09G004700 Citrullus lanatus HOM05D006460 ORTHO05D008143 2.3e-157 559.7 466 59.0
CSS0037090 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 3.0e-157 559.3 485 59.0
Gohir.A07G130500 Gossypium hirsutum HOM05D006460 ORTHO05D008143 1.5e-156 557.0 456 61.2
THA.LOC104801320 Tarenaya hassleriana HOM05D006460 ORTHO05D008143 1.5e-156 557.0 458 60.7
Oeu002575.1 Olea europaea HOM05D006460 ORTHO05D008143 2.8e-155 552.7 458 59.6
Thhalv10028644m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 2.4e-154 549.7 460 59.3
Thhalv10028645m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 2.4e-154 549.7 460 59.3
AUR62024570 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.6e-153 547.0 457 58.9
Solyc01g068050.3 Solanum lycopersicum HOM05D006460 ORTHO05D008143 3.5e-153 545.8 457 59.7
DCAR_012316 Daucus carota HOM05D006460 ORTHO05D008143 4.5e-153 545.4 466 58.2
Cc01_g21920 Coffea canephora HOM05D006460 ORTHO05D008143 1.7e-152 543.5 463 58.7
AUR62011736 Chenopodium quinoa HOM05D006460 ORTHO05D008143 8.6e-152 541.2 457 58.4
PGSC0003DMG400005211 Solanum tuberosum HOM05D006460 ORTHO05D008143 1.1e-151 540.8 458 59.2
Aqoxy5G02768 Aquilegia oxysepala HOM05D006460 ORTHO05D008143 1.5e-151 540.4 468 57.7
A03p31440 Brassica napus HOM05D006460 ORTHO05D008143 1.5e-151 540.4 460 59.3
CAN.G100.27 Capsicum annuum HOM05D006460 ORTHO05D008143 1.5e-151 540.4 459 59.7
FAN19G0891 Fragaria x ananassa HOM05D006460 ORTHO05D008143 2.5e-151 539.7 472 57.6
HanXRQChr13g0414441 Helianthus annuus HOM05D006460 ORTHO05D008143 3.3e-151 539.3 457 60.4
AT4G01880 Arabidopsis thaliana HOM05D006460 ORTHO05D008143 4.2e-151 538.9 461 60.1
C03p38430 Brassica napus HOM05D006460 ORTHO05D008143 2.8e-150 536.2 460 59.6
BraA03t12325Z Brassica rapa HOM05D006460 ORTHO05D008143 1.0e-149 534.3 460 59.1
Sp6g01720 Schrenkiella parvula HOM05D006460 ORTHO05D008143 1.0e-149 534.3 460 58.7
Cfa004883 Carpinus fangiana HOM05D006460 ORTHO05D008143 1.4e-149 533.9 414 64.7
SalBow6G2760 Salvia bowleyana HOM05D006460 ORTHO05D008143 1.8e-149 533.5 461 58.1
BcaC01g06799 Brassica carinata HOM05D006460 ORTHO05D008143 2.3e-149 533.1 460 59.1
BolC3t16117H Brassica oleracea HOM05D006460 ORTHO05D008143 2.3e-149 533.1 460 59.1
BcaB01g02385 Brassica carinata HOM05D006460 ORTHO05D008143 4.0e-149 532.3 461 58.1
Carub.0006s3536 Capsella rubella HOM05D006460 ORTHO05D008143 4.0e-149 532.3 459 58.0
CARHR249840 Cardamine hirsuta HOM05D006460 ORTHO05D008143 1.2e-148 530.8 456 58.3
FAN26G0500 Fragaria x ananassa HOM05D006460 ORTHO05D008143 1.5e-148 530.4 473 56.9
MSTRG.21724 Avicennia marina HOM05D006460 ORTHO05D008143 3.4e-148 529.3 461 57.0
AL6G51420 Arabidopsis lyrata HOM05D006460 ORTHO05D008143 2.8e-147 526.2 462 59.1
Hund09677 Selenicereus undatus HOM05D006460 ORTHO05D008143 2.4e-146 523.1 462 58.0
Migut.D00030 Erythranthe guttata HOM05D006460 ORTHO05D008143 5.4e-146 521.9 460 58.9
PSO357G0369 Papaver somniferum HOM05D006460 ORTHO05D008143 1.7e-144 516.9 461 56.6
Nitab4.5_0000222g0270 Nicotiana tabacum HOM05D006460 ORTHO05D008143 3.3e-143 512.7 486 54.9
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 7.3e-143 511.5 414 62.6
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 6.1e-142 508.4 472 56.4
SGA_v2.0_scaffold417G51258 Striga asiatica HOM05D006460 ORTHO05D008143 8.0e-142 508.1 463 56.2
Lsat_1_v5_gn_8_167341 Lactuca sativa HOM05D006460 ORTHO05D008143 3.1e-141 506.1 456 57.9
Aa31LG5G1480 Aethionema arabicum HOM05D006460 ORTHO05D008143 6.8e-141 505.0 491 54.0
EL10As5g23582 Beta vulgaris HOM05D006460 ORTHO05D008143 2.3e-133 479.9 473 53.9
MELO3C023610.2 Cucumis melo HOM05D006460 ORTHO05D008143 8.3e-131 471.5 443 53.5
Eucgr.L00887 Eucalyptus grandis HOM05D006460 ORTHO05D008143 8.3e-131 471.5 349 66.8
ATR0796G118 Amborella trichopoda HOM05D006460 ORTHO05D008143 1.1e-130 471.1 494 49.8
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 1.6e-129 467.2 424 56.4
HPP92_010877 Vanilla planifolia HOM05D000746 ORTHO05D000573 2.0e-124 450.3 464 49.6
PSO170G6216 Papaver somniferum HOM05D006460 ORTHO05D008143 1.4e-122 444.1 391 57.8
CsaV3_7G030430 Cucumis sativus L. HOM05D006460 ORTHO05D008143 3.2e-122 443.0 354 61.9
PSO384G3244 Papaver somniferum HOM05D006460 ORTHO05D008143 7.1e-122 441.8 395 57.5
Nitab4.5_0002994g0020 Nicotiana tabacum HOM05D006460 ORTHO05D008143 3.5e-121 439.5 481 49.5
CSS0008981 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 1.3e-120 437.6 359 61.3
Dinv33158 Davidia involucrata HOM05D001974 ORTHO05D001995 1.5e-119 434.1 334 63.5
Ah.11g045760 Amaranthus hybridus HOM05D006460 ORTHO05D008143 2.4e-117 426.8 455 50.5
Mapoly0095s0050 Marchantia polymorpha HOM05D006460 ORTHO05D008143 5.3e-109 399.1 488 44.1
Zm00001eb211340 Zea mays HOM05D006460 ORTHO05D008143 2.2e-107 393.7 377 53.6
Pp3c21_16200 Physcomitrium patens HOM05D006460 ORTHO05D008143 3.2e-106 389.8 524 41.6
AagrBONN_evm.TU.Sc2ySwM_228.322 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.0e-104 384.8 468 45.1
AagrBONN_evm.TU.Sc2ySwM_344.3324 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.0e-104 384.8 467 43.7
SMO010G0007 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 6.0e-97 359.0 462 41.3
Sopen01g029980 Solanum pennellii HOM05D006460 ORTHO05D008143 5.3e-93 345.9 287 60.6
Peaxi162Scf00919g00047 Petunia axillaris HOM05D006460 ORTHO05D008143 1.3e-86 324.7 350 50.0
MBI18_g28900_MAGBIO Magnolia biondii HOM05D006460 ORTHO05D008143 1.3e-80 304.7 439 40.5
unitig_578.g16638 Utricularia gibba HOM05D006460 ORTHO05D008143 1.4e-66 258.1 454 35.5
Os03g0833200 Oryza sativa ssp. japonica HOM05D006460 ORTHO05D008143 2.6e-60 237.3 251 50.2
MCO13G012 Micromonas commoda HOM05D006460 ORTHO05D008143 4.1e-53 213.4 502 31.1
PRCOL_00001885 Prasinoderma coloniale HOM05D006460 ORTHO05D008143 1.7e-43 181.4 508 28.7
SMO339G0034 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 2.9e-43 180.6 248 39.9
SEGI_40178 Sequoiadendron giganteum HOM05D006460 ORTHO05D008143 4.2e-42 176.8 279 39.1
MD17G1281000 Malus domestica HOM05D006460 ORTHO05D008143 9.8e-39 165.6 234 42.3
AUR62029044 Chenopodium quinoa HOM05D006460 ORTHO05D008143 4.1e-37 160.2 156 55.1
AUR62036055 Chenopodium quinoa HOM05D006460 ORTHO05D008143 2.7e-36 157.5 156 53.8
Cre16.g654992 Chlamydomonas reinhardtii HOM05D006460 ORTHO05D008143 8.6e-27 125.9 814 20.6
CBR_g49426 Chara braunii HOM05D006460 ORTHO05D008143 2.2e-22 111.3 90 55.6
QL04p085746 Quercus lobata HOM05D006460 ORTHO05D008143 2.9e-22 110.9 108 54.6
AagrBONN_evm.TU.Sc2ySwM_228.45 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.0e-19 102.4 228 33.3
RcHm_v2.0_Chr7g0232271 Rosa chinensis HOM05D006460 ORTHO05D008143 1.8e-16 91.7 78 57.7
Hund09679 Selenicereus undatus HOM05D006460 ORTHO05D008143 8.3e-14 82.8 59 57.6
AUR62007801 Chenopodium quinoa HOM05D006460 ORTHO05D008143 6.6e-11 73.2 80 48.8
QL05p033637 Quercus lobata HOM05D000101 ORTHO05D000089 1.9e-10 71.6 70 50.0
CDE02G3709 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 8.1e-09 66.2 44 63.6
AUR62043166 Chenopodium quinoa HOM05D006460 ORTHO05D008143 6.4e-06 56.6 64 46.9


User provided reference genes

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