Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0338441 Lupinus albus HOM05D006178 ORTHO05D007504 3.4e-183 644.8 316 100.0
Lj2g0017740 Lotus japonicus HOM05D006178 ORTHO05D007504 1.8e-147 526.2 291 86.6
Ca_12542_v3 Cicer arietinum L. HOM05D006178 ORTHO05D007504 7.7e-143 510.8 314 79.9
Glyma.02G085100 Glycine max HOM05D006178 ORTHO05D007504 3.8e-142 508.4 291 84.5
Medtr1g032430 Medicago truncatula HOM05D006178 ORTHO05D007504 1.1e-141 506.9 289 83.0
Psat6g046400 Pisum sativum HOM05D006178 ORTHO05D007504 4.2e-141 505.0 289 82.7
TPR.G36937 Trifolium pratense HOM05D006178 ORTHO05D007504 4.5e-135 485.0 290 80.3
arahy.Tifrunner.gnm1.ann1.56CUD8 Arachis hypogaea HOM05D006178 ORTHO05D007504 3.7e-129 465.3 288 78.1
arahy.Tifrunner.gnm1.ann1.M99K8C Arachis hypogaea HOM05D006178 ORTHO05D007504 2.7e-127 459.1 288 77.1
MD13G1020300 Malus domestica HOM05D006178 ORTHO05D007504 7.7e-127 457.6 291 75.3
CiPaw.05G188700 Carya illinoinensis HOM05D006178 ORTHO05D007504 9.5e-125 450.7 291 74.6
FvH4_4g33550 Fragaria vesca HOM05D006178 ORTHO05D007504 4.9e-121 438.3 291 72.5
Atru.chr11.922 Acer truncatum HOM05D006178 ORTHO05D007504 6.3e-121 438.0 286 72.4
Prupe.1G333400 Prunus persica HOM05D006178 ORTHO05D007504 1.8e-120 436.4 291 71.5
CsaV3_5G015780 Cucumis sativus L. HOM05D006178 ORTHO05D007504 4.1e-120 435.3 291 69.1
QL03p035908 Quercus lobata HOM05D006178 ORTHO05D007504 5.4e-120 434.9 315 68.3
Phvul.003G019200 Phaseolus vulgaris HOM05D006178 ORTHO05D007504 2.7e-119 432.6 289 74.0
FAN07G2930 Fragaria x ananassa HOM05D006178 ORTHO05D007504 3.5e-119 432.2 291 71.8
FAN12G1191 Fragaria x ananassa HOM05D006178 ORTHO05D007504 1.7e-118 429.9 303 70.0
FAN22G2090 Fragaria x ananassa HOM05D006178 ORTHO05D007504 3.9e-118 428.7 303 69.6
Ciclev10015964m.g Citrus clementina HOM05D006178 ORTHO05D007504 6.6e-118 427.9 292 69.5
Duzib251G0568 Durio zibethinus HOM05D006178 ORTHO05D007504 8.6e-118 427.6 291 69.1
TWI74G1561 Tripterygium wilfordii HOM05D006178 ORTHO05D007504 5.6e-117 424.9 284 70.4
FAN17G1905 Fragaria x ananassa HOM05D006178 ORTHO05D007504 4.7e-116 421.8 302 68.9
Thecc.02G292800 Theobroma cacao HOM05D006178 ORTHO05D007504 8.0e-116 421.0 292 68.2
Hma1.2p1_0277F.1_g111690 Hydrangea macrophylla HOM05D006178 ORTHO05D007504 1.0e-115 420.6 291 68.4
MELO3C016656.2 Cucumis melo HOM05D006178 ORTHO05D007504 1.4e-115 420.2 305 66.2
THA.LOC104821906 Tarenaya hassleriana HOM05D006178 ORTHO05D007504 3.4e-114 415.6 302 66.9
GSVIVG01011660001 Vitis vinifera HOM05D006178 ORTHO05D007504 4.4e-114 415.2 289 68.2
Actinidia38440 Actinidia chinensis HOM05D006178 ORTHO05D007504 9.8e-114 414.1 287 68.3
CAN.G511.14 Capsicum annuum HOM05D006178 ORTHO05D007504 5.4e-112 408.3 286 66.4
PGSC0003DMG400028747 Solanum tuberosum HOM05D006178 ORTHO05D007504 5.4e-112 408.3 289 66.1
Potri.010G106400 Populus trichocarpa HOM05D006178 ORTHO05D007504 7.0e-112 407.9 288 68.4
Thhalv10007963m.g Eutrema salsugineum HOM05D006178 ORTHO05D007504 1.2e-111 407.1 286 66.4
Gohir.D01G139900 Gossypium hirsutum HOM05D006178 ORTHO05D007504 3.5e-111 405.6 289 65.7
ClCG09G011820 Citrullus lanatus HOM05D006178 ORTHO05D007504 1.7e-110 403.3 279 68.1
Solyc07g008850.3 Solanum lycopersicum HOM05D006178 ORTHO05D007504 1.7e-110 403.3 312 61.9
Gorai.002G172000 Gossypium raimondii HOM05D006178 ORTHO05D007504 3.9e-110 402.1 289 65.4
Sopen07g004780 Solanum pennellii HOM05D006178 ORTHO05D007504 3.9e-110 402.1 316 62.0
Lj6C738G3 Lonicera japonica HOM05D001486 ORTHO05D007504 6.6e-110 401.4 272 68.8
Migut.E00482 Erythranthe guttata HOM05D006178 ORTHO05D007504 1.5e-109 400.2 302 64.6
Gohir.A01G146700 Gossypium hirsutum HOM05D006178 ORTHO05D007504 1.5e-109 400.2 289 64.7
Cpa.g.sc2.193 Carica papaya HOM05D006178 ORTHO05D007504 2.5e-109 399.4 294 65.3
Sp1g23080 Schrenkiella parvula HOM05D006178 ORTHO05D007504 3.3e-109 399.1 286 65.7
SalBow2G2905 Salvia bowleyana HOM05D006178 ORTHO05D007504 9.5e-109 397.5 290 64.5
Eucgr.B02675 Eucalyptus grandis HOM05D006178 ORTHO05D007504 1.6e-108 396.7 287 65.9
Manes.15G134200 Manihot esculenta HOM05D006178 ORTHO05D007504 1.6e-108 396.7 292 67.1
EL10Ac2g02672 Beta vulgaris HOM05D006178 ORTHO05D007504 3.6e-108 395.6 286 64.7
Cc11_g07280 Coffea canephora HOM05D006178 ORTHO05D007504 3.6e-108 395.6 310 60.3
AT1G24793 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 8.0e-108 394.4 286 65.0
AT1G25054 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 8.0e-108 394.4 286 65.0
AT1G25145 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 8.0e-108 394.4 286 65.0
AT1G25210 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 8.0e-108 394.4 286 65.0
COL.COLO4_16591 Corchorus olitorius HOM05D006178 ORTHO05D007504 1.8e-107 393.3 274 67.5
Carub.0001s2539 Capsella rubella HOM05D006178 ORTHO05D007504 5.2e-107 391.7 306 62.7
Oeu044010.1 Olea europaea HOM05D006178 ORTHO05D007504 5.2e-107 391.7 290 65.2
AL1G40190 Arabidopsis lyrata HOM05D006178 ORTHO05D007504 2.6e-106 389.4 298 64.1
PSO017G4246 Papaver somniferum HOM05D006178 ORTHO05D007504 7.5e-106 387.9 290 63.1
PSO478G4000 Papaver somniferum HOM05D006178 ORTHO05D007504 1.7e-105 386.7 290 63.1
Sc04g0008610 Simmondsia chinensis HOM05D006178 ORTHO05D007504 2.9e-105 386.0 289 64.4
A08p26780 Brassica napus HOM05D006178 ORTHO05D007504 6.4e-105 384.8 286 64.0
BcaB03g12042 Brassica carinata HOM05D006178 ORTHO05D007504 2.1e-103 379.8 286 62.9
Ah.02g128010 Amaranthus hybridus HOM05D006178 ORTHO05D007504 2.7e-103 379.4 286 61.9
BcaC01g01670 Brassica carinata HOM05D006178 ORTHO05D007504 3.9e-102 375.6 319 58.6
C03p73180 Brassica napus HOM05D006178 ORTHO05D007504 1.1e-101 374.0 321 58.9
BolC3t19616H Brassica oleracea HOM05D006178 ORTHO05D007504 1.1e-101 374.0 321 58.9
BraA08t34624Z Brassica rapa HOM05D006178 ORTHO05D007504 2.5e-101 372.9 308 61.0
DCAR_007330 Daucus carota HOM05D006178 ORTHO05D007504 7.3e-101 371.3 274 65.3
Peaxi162Scf00937g00336 Petunia axillaris HOM05D006178 ORTHO05D007504 1.6e-100 370.2 273 64.5
HanXRQChr15g0476731 Helianthus annuus HOM05D006178 ORTHO05D007504 1.8e-99 366.7 285 60.0
Aa31LG7G9330 Aethionema arabicum HOM05D006178 ORTHO05D007504 3.1e-99 365.9 299 59.5
ECA246G2474 Erigeron canadensis HOM05D006178 ORTHO05D007504 6.8e-99 364.8 318 57.2
AUR62038473 Chenopodium quinoa HOM05D006178 ORTHO05D007504 4.4e-98 362.1 273 61.5
AUR62014248 Chenopodium quinoa HOM05D006178 ORTHO05D007504 3.7e-97 359.0 273 61.5
MBI13_g29562_MAGBIO Magnolia biondii HOM05D006178 ORTHO05D007504 6.4e-97 358.2 293 60.8
Hund24927 Selenicereus undatus HOM05D006178 ORTHO05D007504 1.3e-94 350.5 369 50.7
Lsat_1_v5_gn_3_53481 Lactuca sativa HOM05D006178 ORTHO05D007504 3.0e-94 349.4 275 61.1
Haze_10879 Corylus avellana HOM05D006178 ORTHO05D007504 4.3e-93 345.5 224 73.2
Os03g0223900 Oryza sativa ssp. japonica HOM05D006178 ORTHO05D007504 2.4e-91 339.7 290 57.9
Zm00001eb009130 Zea mays HOM05D006178 ORTHO05D007504 8.9e-91 337.8 295 59.7
Aqoxy3G00007 Aquilegia oxysepala HOM05D006178 ORTHO05D007504 1.2e-90 337.4 317 54.9
RcHm_v2.0_Chr7g0235121 Rosa chinensis HOM05D006178 ORTHO05D007504 2.2e-89 333.2 211 74.9
Dinv07729 Davidia involucrata HOM05D006178 ORTHO05D007504 1.7e-86 323.6 223 67.7
ATR0753G153 Amborella trichopoda HOM05D006178 ORTHO05D007504 2.5e-85 319.7 276 59.1
Sabra10G0077800 Salix brachista HOM05D006178 ORTHO05D007504 1.6e-84 317.0 272 60.3
vmacro00552 Vaccinium macrocarpon HOM05D006178 ORTHO05D007504 9.0e-83 311.2 302 55.6
SGA_v2.0_scaffold23G10206 Striga asiatica HOM05D006178 ORTHO05D007504 1.5e-82 310.5 282 57.4
CANSAT01G0234 Cannabis sativa HOM05D006178 ORTHO05D007504 2.4e-80 303.1 225 68.0
Pp3c3_1850 Physcomitrium patens HOM05D006178 ORTHO05D007504 3.0e-78 296.2 292 51.7
Sed0021590 Sechium edule HOM05D006178 ORTHO05D007504 9.6e-77 291.2 203 66.5
Mapoly0012s0127 Marchantia polymorpha HOM05D006178 ORTHO05D007504 3.1e-75 286.2 293 50.5
HPP92_013128 Vanilla planifolia HOM05D006178 ORTHO05D007504 5.8e-74 282.0 251 56.2
unitig_22.g5599 Utricularia gibba HOM05D000369 ORTHO05D000253 3.0e-70 269.6 290 52.4
Nitab4.5_0000018g0160 Nicotiana tabacum HOM05D006178 ORTHO05D007504 1.5e-69 267.3 222 60.8
HPP92_013158 Vanilla planifolia HOM05D006178 ORTHO05D007504 5.8e-66 255.4 208 57.2
SMO232G0119 Selaginella moellendorffii HOM05D006178 ORTHO05D007504 4.2e-64 249.2 290 46.2
CBR_g12524 Chara braunii HOM05D006178 ORTHO05D007504 1.0e-62 244.6 378 40.5
Nitab4.5_0009975g0010 Nicotiana tabacum HOM05D006178 ORTHO05D007504 3.0e-62 243.0 246 52.8
CDE05G0668 Ceratophyllum demersum HOM05D006178 ORTHO05D007504 2.4e-59 233.4 227 53.3
CSS0005024 Camellia sinensis var. sinensis HOM05D006178 ORTHO05D007504 6.5e-57 225.3 177 62.1
CSS0001732 Camellia sinensis var. sinensis HOM05D006178 ORTHO05D007504 7.1e-56 221.9 169 62.7
Gohir.D08G117400 Gossypium hirsutum HOM05D006178 ORTHO05D007504 1.0e-54 218.0 169 59.8
Gorai.001G151600 Gossypium raimondii HOM05D006178 ORTHO05D007504 1.8e-54 217.2 169 59.2
Gohir.D10G193800 Gossypium hirsutum HOM05D006178 ORTHO05D007504 3.9e-54 216.1 169 59.8
Gohir.D07G139600 Gossypium hirsutum HOM05D006178 ORTHO05D007504 6.7e-54 215.3 169 59.2
Gohir.D13G135551 Gossypium hirsutum HOM05D006178 ORTHO05D007504 6.7e-54 215.3 169 59.2
Gorai.010G050600 Gossypium raimondii HOM05D006178 ORTHO05D007504 9.7e-53 211.5 169 58.6
Gohir.D11G251901 Gossypium hirsutum HOM05D006178 ORTHO05D007504 1.4e-51 207.6 159 60.4
TAR629G3300 Trochodendron aralioides HOM05D006178 ORTHO05D007504 9.4e-48 194.9 174 56.9
Gorai.005G149500 Gossypium raimondii HOM05D006178 ORTHO05D007504 2.7e-47 193.4 152 59.9
MCO09G291 Micromonas commoda HOM05D006178 ORTHO05D007504 3.0e-46 189.9 274 43.4
TAR629G1361 Trochodendron aralioides HOM05D006178 ORTHO05D007504 8.2e-44 181.8 107 77.6
PRCOL_00001866 Prasinoderma coloniale HOM05D006178 ORTHO05D007504 2.0e-42 177.2 327 36.4
CSS0007559 Camellia sinensis var. sinensis HOM05D006178 ORTHO05D007504 5.9e-42 175.6 103 77.7
CSS0004101 Camellia sinensis var. sinensis HOM05D006178 ORTHO05D007504 1.3e-41 174.5 103 76.7
Gorai.005G145500 Gossypium raimondii HOM05D006178 ORTHO05D007504 5.5e-40 169.1 179 48.6
QL03p035827 Quercus lobata HOM05D006178 ORTHO05D007504 2.6e-37 160.2 111 69.4
AagrBONN_evm.TU.Sc2ySwM_340.423 Anthoceros agrestis HOM05D006178 ORTHO05D007504 2.0e-34 150.6 188 46.3
Cre16.g653350 Chlamydomonas reinhardtii HOM05D006178 ORTHO05D007504 1.5e-32 144.4 272 34.6
SEGI_10880 Sequoiadendron giganteum HOM05D006178 ORTHO05D007504 5.5e-32 142.5 172 44.2
Gorai.009G391300 Gossypium raimondii HOM05D006178 ORTHO05D007504 1.0e-30 138.3 106 61.3
CARHR026360 Cardamine hirsuta HOM05D006178 ORTHO05D007504 8.2e-28 128.6 124 55.6
Gorai.007G245600 Gossypium raimondii HOM05D006178 ORTHO05D007504 4.1e-27 126.3 100 58.0
Gohir.D11G228700 Gossypium hirsutum HOM05D006178 ORTHO05D007504 9.1e-27 125.2 100 58.0
Ca_29306_v3 Cicer arietinum L. HOM05D001616 ORTHO05D007504 9.4e-24 115.2 294 32.0
Nn3g18365 Nelumbo nucifera HOM05D006178 ORTHO05D007504 6.1e-23 112.5 65 75.4
Nn3g18364 Nelumbo nucifera HOM05D006178 ORTHO05D007504 1.8e-22 110.9 94 59.6
Glyma.13G258800 Glycine max HOM05D006178 ORTHO05D007504 9.8e-21 105.1 74 68.9
Glyma.13G368200 Glycine max HOM05D006178 ORTHO05D007504 9.8e-21 105.1 74 68.9
Sed0025662 Sechium edule HOM05D006178 ORTHO05D007504 2.6e-13 80.5 44 77.3
MCO05G527 Micromonas commoda HOM05D014289 ORTHO05D018957 1.4e-06 58.2 94 42.6
Gohir.D08G060150 Gossypium hirsutum HOM05D006178 ORTHO05D007504 2.3e-06 57.4 39 61.5


User provided reference genes

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